EuRBPDB

Description

Ensembl ID: ENSG00000106443 (Gene tree)
Gene ID: 9678
Gene Symbol: PHF14
Alias: KIAA0783
Full Name: PHD finger protein 14
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 211,937 bases
Position: chr7:10,957,892-11,169,828
Accession: 22203
RBP type: non-canonical RBP
Summary: (PHD Finger Protein 14) is a Protein Coding gene. An important paralog of this gene is BRPF3.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000642461	PHF14-216	9869	XM_017012817	ENSP00000495435	603 (aa)	XP_016868306	B4DG57
ENST00000423760	PHF14-202	2627	-	ENSP00000398407	42 (aa)	-	E5RHD5
ENST00000634607	PHF14-215	3407	XM_017012811	ENSP00000489535	948 (aa)	XP_016868300	A0A0U1RRH6
ENST00000498784	PHF14-213	718	-	-	- (aa)	-	-
ENST00000489305	PHF14-209	471	-	-	- (aa)	-	-
ENST00000476774	PHF14-207	399	-	-	- (aa)	-	-
ENST00000521747	PHF14-214	2479	-	ENSP00000428601	42 (aa)	-	E5RHD5
ENST00000497851	PHF14-212	618	-	-	- (aa)	-	-
ENST00000469407	PHF14-203	1991	-	-	- (aa)	-	-
ENST00000481418	PHF14-208	792	-	-	- (aa)	-	-
ENST00000473050	PHF14-205	695	-	-	- (aa)	-	-
ENST00000476009	PHF14-206	1044	-	-	- (aa)	-	-
ENST00000490957	PHF14-210	4058	-	-	- (aa)	-	-
ENST00000470665	PHF14-204	1005	-	-	- (aa)	-	-
ENST00000493922	PHF14-211	408	-	-	- (aa)	-	-
ENST00000403050	PHF14-201	4276	XM_017012816	ENSP00000385795	888 (aa)	XP_016868305	O94880

Gene Model

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000106443	Platelet Function Tests	1.4197700E-005	-
ENSG00000106443	Alzheimer Disease	1E-8	26830138
ENSG00000106443	Age of Onset	1E-8	26830138

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000106443	rs183600932	7	11018769	T	Alzheimer disease and age of onset	26830138	unit increase	5.706	EFO_0000249\|EFO_0004847
ENSG00000106443	rs56317450	7	11137720	A	Self-reported childhood asthma in adult smokers	30373671	NR	2.11	EFO_0004591\|EFO_0006527

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0005515	protein binding	28160558.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0048286	lung alveolus development	-	IEA	Process
GO:2000584	negative regulation of platelet-derived growth factor receptor-alpha signaling pathway	-	IEA	Process
GO:2000791	negative regulation of mesenchymal cell proliferation involved in lung development	-	IEA	Process