EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000108654 (Gene tree)
Gene ID
1655
Gene Symbol
DDX5
Alias
p68|HLR1|G17P1
Full Name
DEAD-box helicase 5
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
9,944 bases
Position
chr17:64,498,256-64,508,199
Accession
2746
RBP type
canonical RBP
Summary
This gene encodes a member of the DEAD box family of RNA helicases that are involved in a variety of cellular processes as a result of its role as an adaptor molecule, promoting interactions with a large number of other factors. This protein is involved in pathways that include the alteration of RNA structures, plays a role as a coregulator of transcription, a regulator of splicing, and in the processing of small noncoding RNAs. Members of this family contain nine conserved motifs, including the conserved Asp-Glu-Ala-Asp (DEAD) motif, important to ATP binding and hydrolysis as well as RNA binding and unwinding activities. Dysregulation of this gene may play a role in cancer development. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2017]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000462885P68HRPF08061.114e-3512
ENSP00000462885P68HRPF08061.114e-3522
ENSP00000403085P68HRPF08061.112.1e-3312
ENSP00000403085P68HRPF08061.112.1e-3322
ENSP00000225792P68HRPF08061.113.3e-3312
ENSP00000225792P68HRPF08061.113.3e-3322
ENSP00000462885DEADPF00270.296.4e-4711
ENSP00000225792DEADPF00270.296.4e-4711
ENSP00000462222DEADPF00270.294.4e-3311
ENSP00000403085DEADPF00270.291.6e-3211
ENSP00000464337DEADPF00270.297e-2011
ENSP00000464659DEADPF00270.291e-1911
ENSP00000464304DEADPF00270.292.4e-0911
ENSP00000464064DEADPF00270.296.4e-0911
ENSP00000463541DEADPF00270.292e-0711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
27338022RNA helicase DEAD box protein 5 regulates Polycomb repressive complex 2/Hox transcript antisense intergenic RNA function in hepatitis B virus infection and hepatocarcinogenesis.Hepatology2016 OctZhang Hdoi: 10.1002/hep.28698
30042133Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5.Genes Dev2018 Aug 1Lee YJdoi: 10.1101/gad.316034.118
11823473The ATPase, RNA unwinding, and RNA binding activities of recombinant p68 RNA helicase.J Biol Chem2002 Apr 12Huang Y-
14733953Phosphorylation of p68 RNA helicase regulates RNA binding by the C-terminal domain of the protein.Biochem Biophys Res Commun2004 Feb 6Yang L-
21249130Gadd45a is an RNA binding protein and is localized in nuclear speckles.PLoS One2011 Jan 7Sytnikova YAdoi: 10.1371/journal.pone.0014500.
23536431Dysfunction of protein homeostasis in myotonic dystrophies.Histol Histopathol2013 SepMeola Gdoi: 10.14670/HH-28.1089
8041617Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases.Nucleic Acids Res1994 Jul 11Gibson TJ-
20966046Mediation of CTCF transcriptional insulation by DEAD-box RNA-binding protein p68 and steroid receptor RNA activator SRA.Genes Dev2010 Nov 15Yao Hdoi: 10.1101/gad.1967810
29374155Kruppel-like factor 4-dependent Staufen1-mediated mRNA decay regulates cortical neurogenesis.Nat Commun2018 Jan 26Moon BSdoi: 10.1038/s41467-017-02720-9.
11250900A subfamily of RNA-binding DEAD-box proteins acts as an estrogen receptor alpha coactivator through the N-terminal activation domain (AF-1) with an RNA coactivator, SRA.EMBO J2001 Mar 15Watanabe M-
22892953Myotonic dystrophy: is a narrow focus obscuring the rest of the field?Curr Opin Neurol2012 OctMahadevan MSdoi: 10.1097/WCO.0b013e328357b0d9.
21846828Host- and strain-specific regulation of influenza virus polymerase activity by interacting cellular proteins.MBio2011 Aug 16Bortz Edoi: 10.1128/mBio.00151-11
23791529DNA-damage-induced nuclear export of precursor microRNAs is regulated by the ATM-AKT pathway.Cell Rep2013 Jun 27Wan Gdoi: 10.1016/j.celrep.2013.05.038
28388421DEAD-Box RNA Binding Protein DDX5: Not a Black-Box during Reprogramming.Cell Stem Cell2017 Apr 6Nefzger CMdoi: 10.1016/j.stem.2017.03.006.
30281815DEAD Box Protein 5 Inhibits Liver Tumorigenesis by Stimulating Autophagy via Interaction with p62/SQSTM1.Hepatology2019 MarZhang Hdoi: 10.1002/hep.30300
24965446Host factors that interact with the pestivirus N-terminal protease, Npro, are components of the ribonucleoprotein complex.J Virol2014 SepJefferson Mdoi: 10.1128/JVI.00984-14
16935882DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation.Nucleic Acids Res2006Fuller-Pace FV-
21277973(-)-Epigallocatechin-3-gallate suppresses growth of AZ521 human gastric cancer cells by targeting the DEAD-box RNA helicase p68.Free Radic Biol Med2011 May 15Tanaka Tdoi: 10.1016/j.freeradbiomed.2011.01.024
15657085Satellite DNA binding and cellular localisation of RNA helicase P68.J Cell Sci2005 Feb 1Enukashvily N-
19673543Analysis of Ewing sarcoma (EWS)-binding proteins: interaction with hnRNP M, U, and RNA-helicases p68/72 within protein-RNA complexes.J Proteome Res2009 OctPahlich Sdoi: 10.1021/pr900235t.
25649741A Novel Anti-Cancer Agent, 1-(3,5-Dimethoxyphenyl)-4-[(6-Fluoro-2-Methoxyquinoxalin-3-yl)Aminocarbonyl] Piperazine (RX-5902), Interferes With β-Catenin Function Through Y593 Phospho-p68 RNA Helicase.J Cell Biochem2015 AugKost GCdoi: 10.1002/jcb.25113.
24035833The DEAD-box RNA helicase DDX5 acts as a positive regulator of Japanese encephalitis virus replication by binding to viral 3' UTR.Antiviral Res2013 NovLi Cdoi: 10.1016/j.antiviral.2013.09.002
26675721DDX5 and its associated lncRNA Rmrp modulate TH17 cell effector functions.Nature2015 Dec 24Huang Wdoi: 10.1038/nature16193
26496121Association of the Long Non-coding RNA Steroid Receptor RNA Activator (SRA) with TrxG and PRC2 Complexes.PLoS Genet2015 Oct 23Wongtrakoongate Pdoi: 10.1371/journal.pgen.1005615
15464984Functional interaction between Smad, CREB binding protein, and p68 RNA helicase.Biochem Biophys Res Commun2004 Nov 5Warner DR-
22156369New function for the RNA helicase p68/DDX5 as a modifier of MBNL1 activity on expanded CUG repeats.Nucleic Acids Res2012 AprLaurent FXdoi: 10.1093/nar/gkr1228
7525583Regulation of p68 RNA helicase by calmodulin and protein kinase C.J Biol Chem1994 Nov 25Buelt MK-
7677776Male germ cell extracts contain proteins binding to the conserved 3'-end of mouse p68 RNA helicase mRNA.Biochem Biophys Res Commun1995 Sep 14Sandhu H-
11279182A-kinase-anchoring protein AKAP95 is targeted to the nuclear matrix and associates with p68 RNA helicase.J Biol Chem2001 May 18Akileswaran L-
23022728Splicing switch of an epigenetic regulator by RNA helicases promotes tumor-cell invasiveness.Nat Struct Mol Biol2012 NovDardenne Edoi: 10.1038/nsmb.2390
18630756Nuclear RNA export and its importance in abiotic stress responses of plants.Curr Top Microbiol Immunol2008Chinnusamy V-
17011493The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation.Dev Cell2006 OctCaretti G-
29729328Structural characterization of β-catenin and RX-5902 binding to phospho-p68 RNA helicase by molecular dynamics simulation.Prog Biophys Mol Biol2018 DecAli Wdoi: 10.1016/j.pbiomolbio.2018.04.011
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000585111DDX5-2321051-ENSP0000046316844 (aa)-J3QKN9
ENST00000581806DDX5-220576-ENSP0000046406452 (aa)-J3QR62
ENST00000583894DDX5-227712--- (aa)--
ENST00000577922DDX5-205996-ENSP00000464337212 (aa)-J3QRQ7
ENST00000577787DDX5-204838-ENSP00000462222166 (aa)-J3KRZ1
ENST00000580026DDX5-2141171--- (aa)--
ENST00000583212DDX5-223543-ENSP0000046390310 (aa)-A0A0G2JLI4
ENST00000583239DDX5-224543-ENSP00000463101181 (aa)-J3KTQ4
ENST00000581551DDX5-217573--- (aa)--
ENST00000578491DDX5-208463--- (aa)--
ENST00000583699DDX5-226750--- (aa)--
ENST00000581230DDX5-2153558--- (aa)--
ENST00000579091DDX5-211531-ENSP0000046458731 (aa)-J3QS97
ENST00000581237DDX5-216592--- (aa)--
ENST00000225792DDX5-2012554-ENSP00000225792614 (aa)-P17844
ENST00000578804DDX5-2102021-ENSP00000462885614 (aa)-J3KTA4
ENST00000585223DDX5-233699--- (aa)--
ENST00000584500DDX5-229531--- (aa)--
ENST00000581697DDX5-219580-ENSP0000046430465 (aa)-J3QRN5
ENST00000630471DDX5-235473-ENSP0000048576499 (aa)-J3QR02
ENST00000582326DDX5-221585--- (aa)--
ENST00000581693DDX5-2182156-ENSP0000046456638 (aa)-J3QS79
ENST00000583562DDX5-225465--- (aa)--
ENST00000578190DDX5-206582-ENSP0000046354146 (aa)-J3QLG9
ENST00000584279DDX5-228676-ENSP00000462206120 (aa)-J3KRX8
ENST00000584549DDX5-230807--- (aa)--
ENST00000585060DDX5-231572-ENSP0000046579116 (aa)-K7EKV0
ENST00000583201DDX5-222556--- (aa)--
ENST00000450599DDX5-2022077-ENSP00000403085535 (aa)-P17844
ENST00000579996DDX5-213820-ENSP00000464659153 (aa)-J3QSF1
ENST00000579461DDX5-212814--- (aa)--
ENST00000540698DDX5-2032225-ENSP0000044027696 (aa)-X6RLV5
ENST00000578400DDX5-207575-ENSP0000046397599 (aa)-J3QR02
ENST00000578758DDX5-209667--- (aa)--
ENST00000585317DDX5-234923--- (aa)--
Gene Model
Click here to download ENSG00000108654's gene model file
Pathways
Pathway IDPathway NameSource
hsa03040SpliceosomeKEGG
hsa05202Transcriptional misregulation in cancerKEGG
hsa05205Proteoglycans in cancerKEGG
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000108654rs19914011764506317?Systolic blood pressure30595370EFO_0006335
ENSG00000108654rs776723221764501846TLung function (FVC)30804560[0.03-0.06] unit decrease0.0451EFO_0004312
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000108654's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000108654DDX59353.488ENSG00000183258DDX418038.298
ENSG00000108654DDX55230.034ENSG00000157349DDX19B7530.345
ENSG00000108654DDX510058.065ENSG00000198231DDX427738.061
ENSG00000108654DDX59853.374ENSG00000184735DDX536943.018
ENSG00000108654DDX58350.000ENSG00000278053DDX526630.713
ENSG00000108654DDX59348.837ENSG00000123064DDX548637.363
ENSG00000108654DDX59853.012ENSG00000067048DDX3Y7439.880
ENSG00000108654DDX510089.759ENSG00000100201DDX177190.000
ENSG00000108654DDX59239.583ENSG00000124228DDX278832.653
ENSG00000108654DDX57455.882ENSG00000178105DDX105035.043
ENSG00000108654DDX58347.368ENSG00000136271DDX569630.055
ENSG00000108654DDX55130.345ENSG00000168872DDX19A7030.345
ENSG00000108654DDX56840.496ENSG00000089737DDX246630.721
ENSG00000108654DDX510056.522ENSG00000080007DDX436843.430
ENSG00000108654DDX57439.370ENSG00000105671DDX497434.435
ENSG00000108654DDX59435.976ENSG00000125485DDX315730.178
ENSG00000108654DDX59732.680ENSG00000109832DDX259331.768
ENSG00000108654DDX59332.867ENSG00000156976EIF4A29233.714
ENSG00000108654DDX510047.826ENSG00000174243DDX235538.554
ENSG00000108654DDX59346.512ENSG00000152670DDX46839.698
ENSG00000108654DDX58352.632ENSG00000213782DDX477339.233
ENSG00000108654DDX58833.333ENSG00000111364DDX558832.941
ENSG00000108654DDX59434.694ENSG00000110367DDX66830.678
ENSG00000108654DDX59832.000ENSG00000141543EIF4A38234.857
ENSG00000108654DDX59346.512ENSG00000118197DDX5910036.842
ENSG00000108654DDX59354.430ENSG00000215301DDX3X9840.756
ENSG00000108654DDX59332.867ENSG00000161960EIF4A19932.184
ENSG00000108654DDX57030.081ENSG00000198563DDX39B7730.029
ENSG00000108654DDX59241.667ENSG00000088205DDX189331.140
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000108654DDX510092.771ENSAPOG00000018223DDX510073.981Acanthochromis_polyacanthus
ENSG00000108654DDX510092.771ENSAPOG00000002749ddx510074.363Acanthochromis_polyacanthus
ENSG00000108654DDX510089.759ENSAPOG00000002796-9677.521Acanthochromis_polyacanthus
ENSG00000108654DDX5100100.000ENSAMEG00000002685DDX592100.000Ailuropoda_melanoleuca
ENSG00000108654DDX510089.759ENSACIG00000001068-9777.521Amphilophus_citrinellus
ENSG00000108654DDX510088.554ENSACIG00000007438-9179.853Amphilophus_citrinellus
ENSG00000108654DDX510092.169ENSACIG00000022414ddx59585.683Amphilophus_citrinellus
ENSG00000108654DDX510092.771ENSACIG00000006502DDX510071.003Amphilophus_citrinellus
ENSG00000108654DDX510092.771ENSAOCG00000010337DDX510073.668Amphiprion_ocellaris
ENSG00000108654DDX510089.759ENSAOCG00000003224-7282.553Amphiprion_ocellaris
ENSG00000108654DDX510092.771ENSAOCG00000022960ddx59976.642Amphiprion_ocellaris
ENSG00000108654DDX510092.771ENSAPEG00000002878DDX510073.668Amphiprion_percula
ENSG00000108654DDX510089.759ENSAPEG00000012868-7282.553Amphiprion_percula
ENSG00000108654DDX510092.771ENSAPEG00000014685ddx510074.322Amphiprion_percula
ENSG00000108654DDX510090.361ENSATEG00000008746-9482.957Anabas_testudineus
ENSG00000108654DDX510092.771ENSATEG00000010482ddx510072.785Anabas_testudineus
ENSG00000108654DDX510092.771ENSATEG00000005840DDX510073.824Anabas_testudineus
ENSG00000108654DDX510096.923ENSAPLG00000009071DDX59989.185Anas_platyrhynchos
ENSG00000108654DDX510096.386ENSACAG00000000843-10086.829Anolis_carolinensis
ENSG00000108654DDX510089.231ENSACAG00000025568-9977.941Anolis_carolinensis
ENSG00000108654DDX510089.759ENSACAG00000008158-8776.892Anolis_carolinensis
ENSG00000108654DDX5100100.000ENSANAG00000007624DDX5100100.000Aotus_nancymaae
ENSG00000108654DDX510092.771ENSACLG00000018254ddx510072.828Astatotilapia_calliptera
ENSG00000108654DDX510093.373ENSACLG00000003098DDX59576.898Astatotilapia_calliptera
ENSG00000108654DDX510092.169ENSAMXG00000004466ddx59975.935Astyanax_mexicanus
ENSG00000108654DDX510092.771ENSAMXG00000015550DDX59284.521Astyanax_mexicanus
ENSG00000108654DDX59989.404ENSAMXG00000042015-9686.645Astyanax_mexicanus
ENSG00000108654DDX5100100.000ENSBTAG00000018423DDX5100100.000Bos_taurus
ENSG00000108654DDX5100100.000ENSCJAG00000019310DDX5100100.000Callithrix_jacchus
ENSG00000108654DDX5100100.000ENSCAFG00000011713DDX592100.000Canis_familiaris
ENSG00000108654DDX5100100.000ENSCAFG00020026563DDX5100100.000Canis_lupus_dingo
ENSG00000108654DDX5100100.000ENSCHIG00000011800DDX5100100.000Capra_hircus
ENSG00000108654DDX5100100.000ENSTSYG00000012149DDX510099.779Carlito_syrichta
ENSG00000108654DDX59698.113ENSCAPG00000007398DDX59881.867Cavia_aperea
ENSG00000108654DDX5100100.000ENSCPOG00000007133DDX510099.674Cavia_porcellus
ENSG00000108654DDX5100100.000ENSCCAG00000037932DDX5100100.000Cebus_capucinus
ENSG00000108654DDX5100100.000ENSCATG00000040784DDX5100100.000Cercocebus_atys
ENSG00000108654DDX5100100.000ENSCLAG00000006874DDX510099.674Chinchilla_lanigera
ENSG00000108654DDX5100100.000ENSCSAG00000004022DDX5100100.000Chlorocebus_sabaeus
ENSG00000108654DDX5100100.000ENSCHOG00000008207DDX510093.656Choloepus_hoffmanni
ENSG00000108654DDX510096.386ENSCPBG00000009227DDX59988.411Chrysemys_picta_bellii
ENSG00000108654DDX510089.759ENSCPBG00000023015-9582.308Chrysemys_picta_bellii
ENSG00000108654DDX5100100.000ENSCANG00000038487DDX5100100.000Colobus_angolensis_palliatus
ENSG00000108654DDX5100100.000ENSCGRG00001014644Ddx510099.187Cricetulus_griseus_chok1gshd
ENSG00000108654DDX5100100.000ENSCGRG00000013097Ddx510099.187Cricetulus_griseus_crigri
ENSG00000108654DDX510092.169ENSCSEG00000007987DDX510073.469Cynoglossus_semilaevis
ENSG00000108654DDX510092.771ENSCSEG00000014167ddx58282.937Cynoglossus_semilaevis
ENSG00000108654DDX510092.169ENSCVAG00000018093ddx59785.447Cyprinodon_variegatus
ENSG00000108654DDX510084.615ENSCVAG00000015378-9381.455Cyprinodon_variegatus
ENSG00000108654DDX510090.964ENSDARG00000038068ddx59786.042Danio_rerio
ENSG00000108654DDX5100100.000ENSDNOG00000004247-9399.330Dasypus_novemcinctus
ENSG00000108654DDX5100100.000ENSDNOG00000039281-10099.186Dasypus_novemcinctus
ENSG00000108654DDX5100100.000ENSDORG00000004866Ddx510099.674Dipodomys_ordii
ENSG00000108654DDX5100100.000ENSETEG00000019950DDX510098.862Echinops_telfairi
ENSG00000108654DDX59986.755ENSEBUG00000011578ddx56875.688Eptatretus_burgeri
ENSG00000108654DDX59991.391ENSEBUG00000004340ddx58576.613Eptatretus_burgeri
ENSG00000108654DDX5100100.000ENSEASG00005014694DDX59998.858Equus_asinus_asinus
ENSG00000108654DDX5100100.000ENSECAG00000011132DDX510099.837Equus_caballus
ENSG00000108654DDX56498.551ENSEEUG00000008206-5698.551Erinaceus_europaeus
ENSG00000108654DDX510086.747ENSEEUG00000002487-6480.384Erinaceus_europaeus
ENSG00000108654DDX510089.759ENSELUG00000001184-7282.128Esox_lucius
ENSG00000108654DDX510089.759ENSELUG00000024602-9268.552Esox_lucius
ENSG00000108654DDX510091.566ENSELUG00000009107ddx510073.642Esox_lucius
ENSG00000108654DDX510090.361ENSELUG00000007424DDX59677.431Esox_lucius
ENSG00000108654DDX5100100.000ENSFCAG00000003512DDX5100100.000Felis_catus
ENSG00000108654DDX510096.923ENSFALG00000002317DDX59989.123Ficedula_albicollis
ENSG00000108654DDX5100100.000ENSFDAG00000019420-10099.500Fukomys_damarensis
ENSG00000108654DDX510089.231ENSFDAG00000017549-10075.812Fukomys_damarensis
ENSG00000108654DDX510092.169ENSFHEG00000011093ddx59785.300Fundulus_heteroclitus
ENSG00000108654DDX510084.615ENSFHEG00000015667-8663.845Fundulus_heteroclitus
ENSG00000108654DDX510092.169ENSFHEG00000005567DDX59083.942Fundulus_heteroclitus
ENSG00000108654DDX510092.169ENSGMOG00000010758ddx510072.397Gadus_morhua
ENSG00000108654DDX510084.615ENSGMOG00000010007-10072.727Gadus_morhua
ENSG00000108654DDX510096.923ENSGALG00000003532DDX510088.943Gallus_gallus
ENSG00000108654DDX510089.157ENSGAFG00000013389-9269.294Gambusia_affinis
ENSG00000108654DDX510092.169ENSGAFG00000010491-8865.674Gambusia_affinis
ENSG00000108654DDX510091.566ENSGAFG00000017380ddx59085.086Gambusia_affinis
ENSG00000108654DDX510092.169ENSGACG00000007026ddx59078.345Gasterosteus_aculeatus
ENSG00000108654DDX510080.000ENSGACG00000019254DDX59567.541Gasterosteus_aculeatus
ENSG00000108654DDX510096.386ENSGAGG00000020790DDX59988.411Gopherus_agassizii
ENSG00000108654DDX510089.759ENSGAGG00000021204-8673.050Gopherus_agassizii
ENSG00000108654DDX5100100.000ENSGGOG00000015418DDX5100100.000Gorilla_gorilla
ENSG00000108654DDX510093.373ENSHBUG00000002856DDX59576.898Haplochromis_burtoni
ENSG00000108654DDX510092.771ENSHBUG00000022017ddx510072.943Haplochromis_burtoni
ENSG00000108654DDX5100100.000ENSHGLG00000001771DDX510099.512Heterocephalus_glaber_female
ENSG00000108654DDX5100100.000ENSHGLG00100001046DDX510099.512Heterocephalus_glaber_male
ENSG00000108654DDX510088.554ENSHCOG00000017168-7278.814Hippocampus_comes
ENSG00000108654DDX510093.373ENSHCOG00000019168DDX510073.011Hippocampus_comes
ENSG00000108654DDX510090.361ENSHCOG00000006456-7082.340Hippocampus_comes
ENSG00000108654DDX510092.771ENSHCOG00000008800ddx59576.650Hippocampus_comes
ENSG00000108654DDX510092.771ENSIPUG00000014448ddx510075.000Ictalurus_punctatus
ENSG00000108654DDX510090.964ENSIPUG00000007815ddx59774.507Ictalurus_punctatus
ENSG00000108654DDX5100100.000ENSSTOG00000012526DDX5100100.000Ictidomys_tridecemlineatus
ENSG00000108654DDX5100100.000ENSJJAG00000017587Ddx510099.511Jaculus_jaculus
ENSG00000108654DDX510091.566ENSKMAG00000012930ddx59675.251Kryptolebias_marmoratus
ENSG00000108654DDX510089.157ENSKMAG00000021636-9268.914Kryptolebias_marmoratus
ENSG00000108654DDX510092.169ENSKMAG00000011257DDX59579.909Kryptolebias_marmoratus
ENSG00000108654DDX510089.759ENSLBEG00000026649-9277.206Labrus_bergylta
ENSG00000108654DDX510092.771ENSLBEG00000022905ddx510072.607Labrus_bergylta
ENSG00000108654DDX510091.566ENSLBEG00000010767DDX510073.668Labrus_bergylta
ENSG00000108654DDX510089.759ENSLACG00000006598-9864.787Latimeria_chalumnae
ENSG00000108654DDX510095.385ENSLACG00000015051DDX510083.268Latimeria_chalumnae
ENSG00000108654DDX510092.169ENSLOCG00000013534ddx59977.107Lepisosteus_oculatus
ENSG00000108654DDX5100100.000ENSLAFG00000004461DDX59598.864Loxodonta_africana
ENSG00000108654DDX510089.759ENSLAFG00000009820-9781.263Loxodonta_africana
ENSG00000108654DDX5100100.000ENSMFAG00000026858DDX5100100.000Macaca_fascicularis
ENSG00000108654DDX5100100.000ENSMMUG00000009463DDX5100100.000Macaca_mulatta
ENSG00000108654DDX5100100.000ENSMNEG00000039559DDX510098.936Macaca_nemestrina
ENSG00000108654DDX5100100.000ENSMLEG00000041700DDX5100100.000Mandrillus_leucophaeus
ENSG00000108654DDX510092.771ENSMAMG00000016568DDX510073.668Mastacembelus_armatus
ENSG00000108654DDX510092.771ENSMAMG00000008781ddx510074.121Mastacembelus_armatus
ENSG00000108654DDX510089.759ENSMAMG00000007912-8872.549Mastacembelus_armatus
ENSG00000108654DDX510093.373ENSMZEG00005001247DDX59576.898Maylandia_zebra
ENSG00000108654DDX510092.771ENSMZEG00005004609ddx510072.943Maylandia_zebra
ENSG00000108654DDX510089.759ENSMZEG00005005770-7586.901Maylandia_zebra
ENSG00000108654DDX510096.923ENSMGAG00000007667DDX59989.500Meleagris_gallopavo
ENSG00000108654DDX5100100.000ENSMAUG00000008696Ddx510099.187Mesocricetus_auratus
ENSG00000108654DDX5100100.000ENSMICG00000009267DDX510099.778Microcebus_murinus
ENSG00000108654DDX5100100.000ENSMOCG00000012124Ddx510099.187Microtus_ochrogaster
ENSG00000108654DDX510092.771ENSMMOG00000015736DDX59577.409Mola_mola
ENSG00000108654DDX510092.771ENSMMOG00000009479ddx59985.093Mola_mola
ENSG00000108654DDX5100100.000ENSMODG00000003743DDX59098.697Monodelphis_domestica
ENSG00000108654DDX510090.361ENSMALG00000001286-8370.435Monopterus_albus
ENSG00000108654DDX510089.231ENSMALG00000002954ddx59583.514Monopterus_albus
ENSG00000108654DDX510092.771ENSMALG00000022550DDX59083.610Monopterus_albus
ENSG00000108654DDX5100100.000ENSMUSG00000020719Ddx510099.024Mus_musculus
ENSG00000108654DDX5100100.000MGP_SPRETEiJ_G0018173Ddx510099.024Mus_spretus
ENSG00000108654DDX5100100.000ENSMPUG00000014596-9789.785Mustela_putorius_furo
ENSG00000108654DDX5100100.000ENSMPUG00000009262-9299.837Mustela_putorius_furo
ENSG00000108654DDX5100100.000ENSMLUG00000009496DDX59299.837Myotis_lucifugus
ENSG00000108654DDX5100100.000ENSNGAG00000016241Ddx510099.350Nannospalax_galili
ENSG00000108654DDX510082.609ENSNBRG00000002979DDX59461.897Neolamprologus_brichardi
ENSG00000108654DDX510092.771ENSNBRG00000001026ddx59572.890Neolamprologus_brichardi
ENSG00000108654DDX5100100.000ENSNLEG00000014929DDX5100100.000Nomascus_leucogenys
ENSG00000108654DDX5100100.000ENSMEUG00000003843DDX58898.272Notamacropus_eugenii
ENSG00000108654DDX5100100.000ENSOPRG00000008204DDX510093.496Ochotona_princeps
ENSG00000108654DDX510087.097ENSODEG00000006088-9081.378Octodon_degus
ENSG00000108654DDX510093.373ENSONIG00000018269DDX59576.733Oreochromis_niloticus
ENSG00000108654DDX510089.759ENSONIG00000008402-9280.741Oreochromis_niloticus
ENSG00000108654DDX510092.771ENSONIG00000008283ddx510071.924Oreochromis_niloticus
ENSG00000108654DDX5100100.000ENSOANG00000010957-9695.706Ornithorhynchus_anatinus
ENSG00000108654DDX510089.157ENSOANG00000010568-9780.585Ornithorhynchus_anatinus
ENSG00000108654DDX5100100.000ENSOANG00000008043-10098.371Ornithorhynchus_anatinus
ENSG00000108654DDX5100100.000ENSOCUG00000026305DDX59997.213Oryctolagus_cuniculus
ENSG00000108654DDX510092.169ENSORLG00000015098ddx59183.268Oryzias_latipes
ENSG00000108654DDX510089.157ENSORLG00000014497-9775.630Oryzias_latipes
ENSG00000108654DDX510092.771ENSORLG00000000866DDX59083.252Oryzias_latipes
ENSG00000108654DDX510089.157ENSORLG00020007089-7579.832Oryzias_latipes_hni
ENSG00000108654DDX510092.771ENSORLG00020000846DDX59484.298Oryzias_latipes_hni
ENSG00000108654DDX510092.169ENSORLG00020005294ddx59574.709Oryzias_latipes_hni
ENSG00000108654DDX510092.771ENSORLG00015017400DDX59484.362Oryzias_latipes_hsok
ENSG00000108654DDX510092.169ENSORLG00015017383ddx59574.709Oryzias_latipes_hsok
ENSG00000108654DDX510089.759ENSOMEG00000006411-7587.540Oryzias_melastigma
ENSG00000108654DDX510092.771ENSOMEG00000008956DDX510073.113Oryzias_melastigma
ENSG00000108654DDX510092.771ENSOMEG00000008354ddx59284.223Oryzias_melastigma
ENSG00000108654DDX5100100.000ENSOARG00000015045DDX592100.000Ovis_aries
ENSG00000108654DDX5100100.000ENSPPAG00000042005DDX5100100.000Pan_paniscus
ENSG00000108654DDX5100100.000ENSPPRG00000017727-10098.046Panthera_pardus
ENSG00000108654DDX5100100.000ENSPPRG00000013254-100100.000Panthera_pardus
ENSG00000108654DDX5100100.000ENSPTIG00000010353DDX5100100.000Panthera_tigris_altaica
ENSG00000108654DDX5100100.000ENSPTRG00000009543DDX5100100.000Pan_troglodytes
ENSG00000108654DDX5100100.000ENSPANG00000020701DDX5100100.000Papio_anubis
ENSG00000108654DDX510091.566ENSPKIG00000007686ddx510074.003Paramormyrops_kingsleyae
ENSG00000108654DDX510092.169ENSPKIG00000006762DDX59187.192Paramormyrops_kingsleyae
ENSG00000108654DDX510089.759ENSPSIG00000004118-6886.792Pelodiscus_sinensis
ENSG00000108654DDX510096.386ENSPSIG00000010830DDX59989.073Pelodiscus_sinensis
ENSG00000108654DDX59992.121ENSPMGG00000009902ddx59576.138Periophthalmus_magnuspinnatus
ENSG00000108654DDX59389.744ENSPMGG00000002172DDX57568.615Periophthalmus_magnuspinnatus
ENSG00000108654DDX5100100.000ENSPEMG00000016502Ddx510099.187Peromyscus_maniculatus_bairdii
ENSG00000108654DDX5100100.000ENSPCIG00000014428DDX510098.534Phascolarctos_cinereus
ENSG00000108654DDX510092.169ENSPFOG00000004109ddx510072.628Poecilia_formosa
ENSG00000108654DDX510092.169ENSPFOG00000011690DDX59183.942Poecilia_formosa
ENSG00000108654DDX510089.157ENSPFOG00000011861-9880.244Poecilia_formosa
ENSG00000108654DDX510092.169ENSPLAG00000014263ddx510073.469Poecilia_latipinna
ENSG00000108654DDX510092.169ENSPLAG00000013054DDX510072.656Poecilia_latipinna
ENSG00000108654DDX510089.157ENSPLAG00000006320-9269.522Poecilia_latipinna
ENSG00000108654DDX510089.157ENSPMEG00000009339-9269.522Poecilia_mexicana
ENSG00000108654DDX510092.169ENSPMEG00000018534ddx59376.717Poecilia_mexicana
ENSG00000108654DDX510092.169ENSPMEG00000011703DDX510072.500Poecilia_mexicana
ENSG00000108654DDX510092.169ENSPREG00000015413ddx59881.391Poecilia_reticulata
ENSG00000108654DDX510092.771ENSPREG00000018914DDX510072.613Poecilia_reticulata
ENSG00000108654DDX5100100.000ENSPPYG00000008547DDX5100100.000Pongo_abelii
ENSG00000108654DDX5100100.000ENSPCAG00000007111DDX57695.238Procavia_capensis
ENSG00000108654DDX5100100.000ENSPCOG00000023732DDX5100100.000Propithecus_coquereli
ENSG00000108654DDX5100100.000ENSPVAG00000001932DDX510099.511Pteropus_vampyrus
ENSG00000108654DDX510092.771ENSPNYG00000020909ddx510072.943Pundamilia_nyererei
ENSG00000108654DDX510093.373ENSPNYG00000017510DDX59576.733Pundamilia_nyererei
ENSG00000108654DDX510092.771ENSPNAG00000029431DDX59285.012Pygocentrus_nattereri
ENSG00000108654DDX510092.771ENSPNAG00000000825ddx59578.020Pygocentrus_nattereri
ENSG00000108654DDX5100100.000ENSRNOG00000030680Ddx510099.187Rattus_norvegicus
ENSG00000108654DDX5100100.000ENSRBIG00000038867DDX5100100.000Rhinopithecus_bieti
ENSG00000108654DDX5100100.000ENSRROG00000000127DDX5100100.000Rhinopithecus_roxellana
ENSG00000108654DDX5100100.000ENSSBOG00000018926DDX5100100.000Saimiri_boliviensis_boliviensis
ENSG00000108654DDX5100100.000ENSSHAG00000012772DDX59098.534Sarcophilus_harrisii
ENSG00000108654DDX510092.771ENSSFOG00015003802ddx59478.224Scleropages_formosus
ENSG00000108654DDX510092.771ENSSFOG00015004961DDX510075.283Scleropages_formosus
ENSG00000108654DDX510089.157ENSSFOG00015013052-9382.447Scleropages_formosus
ENSG00000108654DDX510092.771ENSSMAG00000017903DDX510073.175Scophthalmus_maximus
ENSG00000108654DDX510092.169ENSSMAG00000003994ddx59784.124Scophthalmus_maximus
ENSG00000108654DDX510092.771ENSSDUG00000019456DDX510074.138Seriola_dumerili
ENSG00000108654DDX510088.554ENSSDUG00000020428-7380.335Seriola_dumerili
ENSG00000108654DDX510089.759ENSSDUG00000016136-9687.220Seriola_dumerili
ENSG00000108654DDX510092.169ENSSDUG00000017954ddx59480.292Seriola_dumerili
ENSG00000108654DDX510088.554ENSSLDG00000008526-8979.012Seriola_lalandi_dorsalis
ENSG00000108654DDX510092.771ENSSLDG00000003614DDX510074.138Seriola_lalandi_dorsalis
ENSG00000108654DDX510092.169ENSSLDG00000024131ddx510073.726Seriola_lalandi_dorsalis
ENSG00000108654DDX510089.759ENSSLDG00000024923-9177.094Seriola_lalandi_dorsalis
ENSG00000108654DDX510087.349ENSSARG00000004642-8082.171Sorex_araneus
ENSG00000108654DDX59581.395ENSSARG00000007813DDX56199.281Sorex_araneus
ENSG00000108654DDX510096.923ENSSPUG00000004544-9896.818Sphenodon_punctatus
ENSG00000108654DDX510088.554ENSSPUG00000011141-9267.869Sphenodon_punctatus
ENSG00000108654DDX510096.923ENSSPUG00000004555-10087.728Sphenodon_punctatus
ENSG00000108654DDX510092.771ENSSPAG00000004363ddx510073.684Stegastes_partitus
ENSG00000108654DDX510092.771ENSSPAG00000014946DDX510073.981Stegastes_partitus
ENSG00000108654DDX5100100.000ENSSSCG00000032092DDX510099.804Sus_scrofa
ENSG00000108654DDX510096.923ENSTGUG00000004622DDX59989.465Taeniopygia_guttata
ENSG00000108654DDX510089.759ENSTGUG00000015887-9984.179Taeniopygia_guttata
ENSG00000108654DDX510093.373ENSTRUG00000002356DDX510073.543Takifugu_rubripes
ENSG00000108654DDX510092.169ENSTRUG00000009308ddx510072.596Takifugu_rubripes
ENSG00000108654DDX510089.759ENSTRUG00000009294-9581.297Takifugu_rubripes
ENSG00000108654DDX510089.759ENSTNIG00000017510DDX510070.681Tetraodon_nigroviridis
ENSG00000108654DDX510089.759ENSTNIG00000006247-9278.542Tetraodon_nigroviridis
ENSG00000108654DDX5100100.000ENSTBEG00000009490DDX510099.792Tupaia_belangeri
ENSG00000108654DDX510089.157ENSTBEG00000012479-6969.643Tupaia_belangeri
ENSG00000108654DDX5100100.000ENSTTRG00000008793DDX510099.837Tursiops_truncatus
ENSG00000108654DDX5100100.000ENSUAMG00000023388DDX5100100.000Ursus_americanus
ENSG00000108654DDX510089.759ENSUMAG00000014651-9381.841Ursus_maritimus
ENSG00000108654DDX5100100.000ENSUMAG00000017787DDX5100100.000Ursus_maritimus
ENSG00000108654DDX5100100.000ENSVPAG00000010759DDX510098.860Vicugna_pacos
ENSG00000108654DDX5100100.000ENSVVUG00000006263DDX510099.349Vulpes_vulpes
ENSG00000108654DDX510093.373ENSXETG00000012580ddx510079.006Xenopus_tropicalis
ENSG00000108654DDX510091.566ENSXCOG00000015774ddx59086.010Xiphophorus_couchianus
ENSG00000108654DDX510092.771ENSXCOG00000012265DDX510072.457Xiphophorus_couchianus
ENSG00000108654DDX510089.157ENSXCOG00000012232-9276.688Xiphophorus_couchianus
ENSG00000108654DDX510091.566ENSXMAG00000008305ddx59785.903Xiphophorus_maculatus
ENSG00000108654DDX510092.771ENSXMAG00000006131DDX510072.613Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II15298701.IDAProcess
GO:0000380alternative mRNA splicing, via spliceosome24275493.24910439.IMPProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome21343338.IDAProcess
GO:0000381regulation of alternative mRNA splicing, via spliceosome23022728.IMPProcess
GO:0000398mRNA splicing, via spliceosome11991638.ICProcess
GO:0000398mRNA splicing, via spliceosome-TASProcess
GO:0000956nuclear-transcribed mRNA catabolic process23788676.IDAProcess
GO:0001837epithelial to mesenchymal transition24910439.IMPProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003724RNA helicase activity21343338.IMPFunction
GO:0003724RNA helicase activity1996094.NASFunction
GO:0003730mRNA 3'-UTR binding23788676.IDAFunction
GO:0004004ATP-dependent RNA helicase activity-IEAFunction
GO:0005515protein binding10837141.12527917.15113910.15298701.15660129.15846844.17011493.17932509.17960593.18279852.18457437.18548003.19626115.20676135.20818423.21343338.21911577.21994455.22222205.22266867.22365833.22640416.23143267.23741449.23788676.24219989.24581491.24910439.24965446.26420826.IPIFunction
GO:0005516calmodulin binding-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus16791210.HDAComponent
GO:0005634nucleus24910439.IDAComponent
GO:0005634nucleus2451786.NASComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus10837141.IDAComponent
GO:0006357regulation of transcription by RNA polymerase II24275493.IMPProcess
GO:0009299mRNA transcription23143267.IMPProcess
GO:0016020membrane19946888.HDAComponent
GO:0019899enzyme binding-IEAFunction
GO:0030509BMP signaling pathway18548003.IMPProcess
GO:0030520intracellular estrogen receptor signaling pathway24275493.IMPProcess
GO:0030521androgen receptor signaling pathway24275493.IMPProcess
GO:0035500MH2 domain binding18548003.IPIFunction
GO:0036002pre-mRNA binding21343338.IDAFunction
GO:0043021ribonucleoprotein complex binding23788676.IDAFunction
GO:0043517positive regulation of DNA damage response, signal transduction by p53 class mediator15660129.IMPProcess
GO:0045069regulation of viral genome replication-IEAProcess
GO:0045445myoblast differentiation-ISSProcess
GO:0045667regulation of osteoblast differentiation-ISSProcess
GO:0046332SMAD binding18548003.IPIFunction
GO:0048306calcium-dependent protein binding-IEAFunction
GO:0048511rhythmic process-IEAProcess
GO:0050681androgen receptor binding18829551.IDAFunction
GO:0060765regulation of androgen receptor signaling pathway18829551.IMPProcess
GO:0061614pri-miRNA transcription by RNA polymerase II-ISSProcess
GO:0070062extracellular exosome19056867.HDAComponent
GO:0070412R-SMAD binding18548003.IPIFunction
GO:0070878primary miRNA binding18548003.IDAFunction
GO:0071013catalytic step 2 spliceosome11991638.IDAComponent
GO:0072332intrinsic apoptotic signaling pathway by p53 class mediator15660129.IMPProcess
GO:1902893regulation of pri-miRNA transcription by RNA polymerase II18548003.IMPProcess
GO:1903800positive regulation of production of miRNAs involved in gene silencing by miRNA18548003.IMPProcess
GO:1990841promoter-specific chromatin binding-ISSFunction
GO:1990904ribonucleoprotein complex18809582.IDAComponent
GO:2001014regulation of skeletal muscle cell differentiation-ISSProcess

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
25745998The DEAD box protein p68: a crucial regulator of AKT/FOXO3a signaling axis in oncogenesis.Oncogene2015 Nov 19Sarkar Mdoi: 10.1038/onc.2015.42
23022728Splicing switch of an epigenetic regulator by RNA helicases promotes tumor-cell invasiveness.Nat Struct Mol Biol2012 NovDardenne Edoi: 10.1038/nsmb.2390
22750847DDX5 regulates DNA replication and is required for cell proliferation in a subset of breast cancer cells.Cancer Discov2012 SepMazurek Adoi: 10.1158/2159-8290.CD-12-0116
28244855Knockdown of DDX5 Inhibits the Proliferation and Tumorigenesis in Esophageal Cancer.Oncol Res2017 Jul 5Ma Zdoi: 10.3727/096504016X14817158982636
28216662DDX5 promotes gastric cancer cell proliferation in vitro and in vivo through mTOR signaling pathway.Sci Rep2017 Feb 20Du Cdoi: 10.1038/srep42876.
19718048The DEAD-box protein p72 regulates ERalpha-/oestrogen-dependent transcription and cell growth, and is associated with improved survival in ERalpha-positive breast cancer.Oncogene2009 Nov 19Wortham NCdoi: 10.1038/onc.2009.261
18239468DEAD-box RNA helicase p68 is not required for nuclear translocation of beta-catenin in colon cancer cells.Cell Cycle2008 Mar 15Stucke VM-
26212035DDX5 promotes proliferation and tumorigenesis of non-small-cell lung cancer cells by activating β-catenin signaling pathway.Cancer Sci2015 OctWang Zdoi: 10.1111/cas.12755
24626184The RNA helicase/transcriptional co-regulator, p68 (DDX5), stimulates expression of oncogenic protein kinase, Polo-like kinase-1 (PLK1), and is associated with elevated PLK1 levels in human breast cancers.Cell Cycle2014Iyer RSdoi: 10.4161/cc.28415
17699760Involvement of RNA helicases p68 and p72 in colon cancer.Cancer Res2007 Aug 15Shin S-
18794152A fluorescence in situ hybridization screen for E26 transformation-specific aberrations: identification of DDX5-ETV4 fusion protein in prostate cancer.Cancer Res2008 Sep 15Han Bdoi: 10.1158/0008-5472.CAN-08-2014.
22086602RNA helicase DDX5 regulates microRNA expression and contributes to cytoskeletal reorganization in basal breast cancer cells.Mol Cell Proteomics2012 FebWang Ddoi: 10.1074/mcp.M111.011932
26314252The expression of RNA helicase DDX5 is transcriptionally upregulated by calcitriol through a vitamin D response element in the proximal promoter in SiHa cervical cells.Mol Cell Biochem2015 DecGonz??lez-Duarte RJdoi: 10.1007/s11010-015-2538-4
23349811p68/DdX5 supports β-catenin & RNAP II during androgen receptor mediated transcription in prostate cancer.PLoS One2013Clark ELdoi: 10.1371/journal.pone.0054150

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1764500127Frame_Shift_InsnovelS547Rfs*550.07
ACCchr17645063135'UTRnovel0.33
BLCAchr1764503235Missense_MutationnovelD255N0.22
BLCAchr1764503821SilentnovelE163E0.33
BLCAchr17644998603'UTRnovel0.21
BLCAchr1764502276Intronnovel0.13
BLCAchr1764500125Missense_MutationNAN548S0.5
BLCAchr1764503095Missense_MutationnovelD272N0.08
BLCAchr1764503550Missense_MutationnovelR177W0.06
BLCAchr1764504298Splice_SitenovelX71_splice0.17
BLCAchr1764500045Nonsense_MutationNAQ575*0.4
BLCAchr1764500064SilentnovelQ568Q0.33
BLCAchr1764503279Missense_MutationnovelR240T0.33
BLCAchr1764503835Nonsense_MutationNAQ159*0.19
BLCAchr1764506097Missense_MutationNAR8Q0.31
BLCAchr1764502177Missense_MutationnovelD381H0.15
BLCAchr1764503508Missense_MutationNAC191G0.26
BRCAchr1764503981Splice_SiteNAX147_splice0.05
BRCAchr1764504760Nonsense_MutationnovelK43*0.09P68HR
BRCAchr1764500148Frame_Shift_Delrs782756724Y540*0.27
BRCAchr17645061495'UTRnovel0.05
BRCAchr1764503220Missense_MutationnovelP260T0.04
BRCAchr1764503231Frame_Shift_InsnovelM256Nfs*40.07
BRCAchr1764504315Missense_MutationnovelE72K0.08
BRCAchr1764500602Missense_MutationnovelA463D0.05
BRCAchr1764503190Splice_RegionNAR270R0.13
BRCAchr1764502518Nonsense_MutationNAE339*0.16
BRCAchr17645062025'UTRnovel0.48
BRCAchr17645062195'UTRnovel0.25
BRCAchr1764500611Missense_MutationNAL460R0.33
BRCAchr1764502542Missense_MutationNAR331C0.03
BRCAchr1764504281Missense_MutationnovelT83R0.07
BRCAchr1764504690Missense_MutationnovelA66G0.21
CESCchr1764504697Missense_MutationNAD64N0.16
CESCchr17644998353'UTRnovel0.23
CESCchr17645062025'UTRnovel0.1
CESCchr1764502031Missense_MutationNAD399Y0.2
CESCchr1764500308Missense_MutationnovelG487E0.5
CESCchr1764500291Missense_Mutationrs782455211R493C0.69
CESCchr1764500195Missense_MutationNAD525H0.45
COADchr1764500632Missense_MutationNAV453A0.33
COADchr1764504259SilentnovelP90P0.08
COADchr1764499991Missense_MutationNAY593H0.09
COADchr17644998953'UTRnovel0.27
COADchr1764500264Frame_Shift_DelNAR502Gfs*870.21
COADchr17644999153'UTRnovel0.24
COADchr17645061965'UTRnovel0.31
COADchr1764502418IntronNA0.23
COADchr1764503431Missense_MutationnovelR216S0.13
COADchr1764503815Silentrs79187435G165G0.2
COADchr1764500036Missense_Mutationrs782608247G578R0.25
COADchr1764500054Frame_Shift_InsnovelD572Nfs*60.04
COADchr1764500720Frame_Shift_InsnovelD424Ifs*310.03
ESCAchr1764499936Missense_MutationnovelG611V0.54
ESCAchr1764500311Missense_MutationnovelR486T0.42
ESCAchr1764502993Nonsense_MutationnovelE306*0.53
GBMchr1764506099Missense_MutationnovelD7E0.41
GBMchr1764504259SilentnovelP90P0.37
GBMchr1764499958Missense_MutationnovelI604L0.05
GBMchr1764503981Splice_SiteNAX147_splice0.38
HNSCchr1764503193Missense_MutationNAI269V0.26
HNSCchr1764503188Splice_RegionnovelR270R0.51
KIRCchr1764503981Splice_SiteNAX147_splice0.03
KIRCchr1764502470Missense_MutationnovelD355H0.12
KIRCchr1764503981Splice_SiteNAX147_splice0.26
KIRCchr1764499925Nonstop_MutationNA*615Qext*240.1
KIRPchr1764500615Missense_Mutationrs782549207V459L0.26
KIRPchr1764503805Missense_Mutationrs781979552I169V0.38
KIRPchr17645062675'UTRnovel0.5
KIRPchr1764500173Missense_MutationnovelN532S0.28
KIRPchr1764500632Missense_MutationnovelV453E0.53
KIRPchr1764503981Splice_SiteNAX147_splice0.28
KIRPchr1764500734Missense_MutationNAP419R0.25
KIRPchr1764504052SilentNAG124G0.59
KIRPchr17644998863'UTRnovel0.6
LAMLchr1764502406Intronnovel0.26
LGGchr1764503981Splice_SiteNAX147_splice0.37
LGGchr1764503981Splice_SiteNAX147_splice0.04
LGGchr1764502184Missense_MutationNAQ378H0.18
LIHCchr1764500143Missense_Mutationrs200823006N542S0.31
LIHCchr1764500643SilentnovelN449N0.28
LIHCchr1764502192Missense_MutationNAS376G0.12
LUADchr1764500177Missense_MutationNAQ531E0.2
LUADchr1764503068Missense_MutationnovelT281S0.14
LUSCchr1764500768Missense_MutationnovelE408K0.47
LUSCchr1764503989SilentnovelT145T0.34
LUSCchr1764504830SilentnovelP19P0.36
LUSCchr1764504241Missense_MutationNAF96L0.24
OVchr1764500196Frame_Shift_DelnovelD515Efs*650.81
OVchr1764500170Missense_MutationNAG533A0.2
OVchr1764504789Missense_MutationnovelK33M0.05P68HR
OVchr1764502055Nonsense_MutationnovelK391Vfs*70.05
OVchr1764503011Missense_MutationNAI300V0.25
OVchr1764503981Splice_SiteNAX147_splice0.75
PAADchr1764500280Missense_MutationnovelR496S0.21
PAADchr1764502999Missense_MutationnovelA304S0.19
PRADchr1764503981Splice_SiteNAX147_splice0.26
PRADchr1764500292Silentrs782678991D492D0.39
READchr1764502401Intronnovel0.46
READchr1764500137Missense_MutationNAS544N0.4
SARCchr1764503981Splice_SiteNAX147_splice0.33
SARCchr1764503981Splice_SiteNAX147_splice0.17
SKCMchr1764499981Missense_MutationNAP596L0.11
SKCMchr1764500324Missense_MutationNAR482C0.46
SKCMchr17644998903'UTRrs2017289920.25
SKCMchr1764503854Silentrs782816392A152A0.15
SKCMchr1764503855Missense_MutationnovelA152V0.14
SKCMchr1764504700Missense_Mutationrs533155437P63S0.31
SKCMchr1764503028Missense_MutationNAL294R0.4
SKCMchr17644998353'UTRnovel0.45
SKCMchr1764500716Frame_Shift_InsnovelY425Lfs*240.13
SKCMchr1764503083SilentnovelL276L0.34
SKCMchr1764502052Missense_MutationnovelA392T0.56
SKCMchr1764503271Missense_MutationNAT243A0.2
SKCMchr1764500207SilentnovelL521L0.1
SKCMchr1764500208SilentNAS520S0.1
SKCMchr1764500609Missense_MutationNAR461C0.21
SKCMchr1764503994Missense_MutationNAK144E0.31
STADchr1764500180Frame_Shift_DelNAT530Lfs*590.26
STADchr1764499959Missense_MutationNAM603I0.26
STADchr1764500278Missense_MutationNAY497C0.19
STADchr1764504238Nonsense_MutationNAY97*0.12
THYMchr1764500035Missense_MutationnovelG578E0.34
UCECchr17644998803'UTRnovel0.37
UCECchr17644998823'UTRnovel0.1
UCECchr1764503562Missense_Mutationrs782126204L173M0.34
UCECchr1764503865SilentnovelL149L0.36
UCECchr1764500626Missense_MutationNAD455G0.37
UCECchr1764504839SilentnovelF16F0.26
UCECchr17645061745'UTRnovel0.78
UCECchr1764503986Silentrs781994725L146L0.36
UCECchr1764499937Nonsense_MutationnovelG611*0.28
UCECchr1764500185Missense_MutationnovelA528V0.32
UCECchr1764502996Missense_Mutationrs782575221L305F0.22
UCECchr1764504313SilentnovelE72E0.04
UCECchr1764502943Silentrs370378223D322D0.56
UCECchr17644997373'UTRnovel0.33
UCECchr1764500708Nonsense_MutationnovelR428*0.37
UCECchr1764503253Nonsense_MutationnovelE249*0.26
UCECchr17644997943'UTRnovel0.24
UCECchr1764500291Missense_MutationNAR493S0.25
UCECchr17644996503'UTRnovel0.5
UCECchr1764503289Frame_Shift_DelnovelT237Pfs*30.39
UCECchr1764502939Nonsense_MutationnovelE324*0.5
UCECchr1764503495Missense_Mutationrs782356381R195H0.35
UCECchr1764500150Missense_MutationNAY540H0.22
UCECchr17644996703'UTRnovel0.21
UCECchr17644998823'UTRrs3724812820.32
UCECchr1764500609Frame_Shift_DelNAL456Vfs*290.64
UCECchr1764500151Missense_MutationnovelN539K0.15
UCECchr1764503078Missense_MutationNAM277I0.06
UCECchr1764502223Splice_RegionnovelG365G0.56
UCECchr1764500191Missense_Mutationrs782040676F526C0.42
UCECchr1764500197Missense_MutationnovelR524I0.04
UCECchr1764500627Missense_Mutationrs369801003D455N0.3
UCECchr1764500247Silentrs782704842T507T0.43
UCECchr17644998463'UTRnovel0.16
UCECchr1764500288Missense_Mutationrs781795667R494W0.34

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BLCAAMP0.39460.00012456
KIRPAMP0.66670.14801
LGGAMP0.05851.52e-05
READAMP0.18790.15915
SARCAMP0.2140.032181
THCADEL0.0020.221
UVMAMP0.16250.054583

Survival Analysis
CancerP-value Q-value
THYM0.0061

Kaplan-Meier Survival Analysis

SARC0.018

Kaplan-Meier Survival Analysis

MESO0.04

Kaplan-Meier Survival Analysis

SKCM0.00015

Kaplan-Meier Survival Analysis

COAD0.0062

Kaplan-Meier Survival Analysis

PAAD0.0019

Kaplan-Meier Survival Analysis

PCPG0.039

Kaplan-Meier Survival Analysis

BLCA0.0028

Kaplan-Meier Survival Analysis

READ0.019

Kaplan-Meier Survival Analysis

LGG0.00089

Kaplan-Meier Survival Analysis

LUAD0.021

Kaplan-Meier Survival Analysis

UVM0.037

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


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