EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000108826 (Gene tree)
Gene ID
51264
Gene Symbol
MRPL27
Alias
N
Full Name
mitochondrial ribosomal protein L27
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
5,358 bases
Position
chr17:50,367,857-50,373,214
Accession
14483
RBP type
canonical RBP
Summary
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000225969Ribosomal_L27PF01016.195.8e-2511
ENSP00000424321Ribosomal_L27PF01016.199.7e-2211
ENSP00000388915Ribosomal_L27PF01016.192.2e-1611
ENSP00000421865Ribosomal_L27PF01016.192.3e-1511
ENSP00000426037Ribosomal_L27PF01016.192.3e-1511
ENSP00000425126Ribosomal_L27PF01016.191.3e-1411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000511860MRPL27-206869-ENSP0000042603793 (aa)-D6RAN8
ENST00000442592MRPL27-2022441-ENSP0000038891594 (aa)-B3KN43
ENST00000514928MRPL27-207397--- (aa)--
ENST00000507088MRPL27-204732-ENSP0000042186593 (aa)-D6RAN8
ENST00000508200MRPL27-205636-ENSP00000424321136 (aa)-H7C5U8
ENST00000225969MRPL27-201716-ENSP00000225969148 (aa)-Q9P0M9
ENST00000503633MRPL27-203742-ENSP0000042512684 (aa)-D6RE11
Gene Model
Click here to download ENSG00000108826's gene model file
Pathways
Pathway IDPathway NameSource
hsa03010RibosomeKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000108826Anthropometry4.7060000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000108826's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000108826MRPL279966.304ENSAPOG00000000462mrpl279561.589Acanthochromis_polyacanthus
ENSG00000108826MRPL2710088.172ENSAMEG00000011876MRPL2710084.459Ailuropoda_melanoleuca
ENSG00000108826MRPL279965.217ENSACIG00000023215mrpl279563.235Amphilophus_citrinellus
ENSG00000108826MRPL279961.957ENSAOCG00000005820mrpl279858.940Amphiprion_ocellaris
ENSG00000108826MRPL279960.870ENSAPEG00000018214mrpl279659.441Amphiprion_percula
ENSG00000108826MRPL279966.304ENSATEG00000023863mrpl279661.538Anabas_testudineus
ENSG00000108826MRPL2710072.043ENSACAG00000005266MRPL279666.197Anolis_carolinensis
ENSG00000108826MRPL2710093.548ENSANAG00000007800MRPL2710092.568Aotus_nancymaae
ENSG00000108826MRPL279967.391ENSACLG00000024891mrpl2710063.333Astatotilapia_calliptera
ENSG00000108826MRPL2710091.398ENSBTAG00000021720MRPL2710086.486Bos_taurus
ENSG00000108826MRPL2710089.247ENSCJAG00000023088-9187.755Callithrix_jacchus
ENSG00000108826MRPL2710090.323ENSCJAG00000043312-9988.811Callithrix_jacchus
ENSG00000108826MRPL2710092.473ENSCJAG00000018851-10090.541Callithrix_jacchus
ENSG00000108826MRPL2710091.398ENSCJAG00000023356-10089.865Callithrix_jacchus
ENSG00000108826MRPL2710088.172ENSCAFG00000017031MRPL2710081.879Canis_familiaris
ENSG00000108826MRPL2710074.194ENSCAFG00020025985-8374.603Canis_lupus_dingo
ENSG00000108826MRPL2710088.172ENSCAFG00020023525-9381.757Canis_lupus_dingo
ENSG00000108826MRPL2710089.247ENSCHIG00000007881MRPL2710085.135Capra_hircus
ENSG00000108826MRPL2710090.323ENSTSYG00000012176MRPL2710089.865Carlito_syrichta
ENSG00000108826MRPL2710086.022ENSCAPG00000012767MRPL2710079.452Cavia_aperea
ENSG00000108826MRPL2710086.022ENSCPOG00000025999MRPL2710081.757Cavia_porcellus
ENSG00000108826MRPL2710075.269ENSCCAG00000026459-10077.953Cebus_capucinus
ENSG00000108826MRPL2710091.398ENSCCAG00000027809-10091.216Cebus_capucinus
ENSG00000108826MRPL2710097.849ENSCATG00000028901MRPL2710095.270Cercocebus_atys
ENSG00000108826MRPL2710090.323ENSCLAG00000012478MRPL2710086.486Chinchilla_lanigera
ENSG00000108826MRPL2710097.849ENSCSAG00000005396MRPL2710094.595Chlorocebus_sabaeus
ENSG00000108826MRPL2710088.172ENSCHOG00000005103MRPL278980.986Choloepus_hoffmanni
ENSG00000108826MRPL279968.478ENSCPBG00000028179MRPL279567.424Chrysemys_picta_bellii
ENSG00000108826MRPL279748.352ENSCSAVG00000011477-7146.018Ciona_savignyi
ENSG00000108826MRPL2710095.699ENSCANG00000034874MRPL2710095.699Colobus_angolensis_palliatus
ENSG00000108826MRPL2710086.022ENSCGRG00001018944Mrpl278683.212Cricetulus_griseus_chok1gshd
ENSG00000108826MRPL2710072.043ENSCGRG00000008284-9971.429Cricetulus_griseus_crigri
ENSG00000108826MRPL2710087.097ENSCGRG00000002582-10083.108Cricetulus_griseus_crigri
ENSG00000108826MRPL279965.217ENSCSEG00000002853mrpl2710060.667Cynoglossus_semilaevis
ENSG00000108826MRPL2710063.441ENSCVAG00000014436mrpl275961.702Cyprinodon_variegatus
ENSG00000108826MRPL279969.149ENSDARG00000032985mrpl2710066.225Danio_rerio
ENSG00000108826MRPL2710083.871ENSDNOG00000023845MRPL2710082.432Dasypus_novemcinctus
ENSG00000108826MRPL279787.778ENSDORG00000001026Mrpl279587.778Dipodomys_ordii
ENSG00000108826MRPL2710076.596ENSETEG00000004969-10076.471Echinops_telfairi
ENSG00000108826MRPL2710083.871ENSETEG00000014252-10081.757Echinops_telfairi
ENSG00000108826MRPL2710089.247ENSEASG00005018616MRPL2710085.135Equus_asinus_asinus
ENSG00000108826MRPL2710089.247ENSECAG00000016779MRPL2710085.135Equus_caballus
ENSG00000108826MRPL277279.104ENSEEUG00000010178-10073.585Erinaceus_europaeus
ENSG00000108826MRPL2710074.194ENSEEUG00000011738-10071.970Erinaceus_europaeus
ENSG00000108826MRPL2710089.247ENSEEUG00000010549-10083.108Erinaceus_europaeus
ENSG00000108826MRPL279964.130ENSELUG00000023147mrpl279964.179Esox_lucius
ENSG00000108826MRPL2710089.247ENSFCAG00000037928MRPL2710083.108Felis_catus
ENSG00000108826MRPL2710070.968ENSFALG00000001307MRPL278968.182Ficedula_albicollis
ENSG00000108826MRPL2710088.172ENSFDAG00000018359MRPL2710083.784Fukomys_damarensis
ENSG00000108826MRPL279964.130ENSFHEG00000007108mrpl279662.500Fundulus_heteroclitus
ENSG00000108826MRPL279963.043ENSGMOG00000000545mrpl2710060.667Gadus_morhua
ENSG00000108826MRPL2710069.892ENSGALG00000038812MRPL279669.173Gallus_gallus
ENSG00000108826MRPL279968.478ENSGACG00000015241mrpl279665.278Gasterosteus_aculeatus
ENSG00000108826MRPL279170.588ENSGAGG00000014297MRPL279270.588Gopherus_agassizii
ENSG00000108826MRPL2710098.810ENSGGOG00000011954MRPL2710098.810Gorilla_gorilla
ENSG00000108826MRPL279967.391ENSHBUG00000019735mrpl2710063.333Haplochromis_burtoni
ENSG00000108826MRPL2710087.097ENSHGLG00000016030MRPL2710083.108Heterocephalus_glaber_female
ENSG00000108826MRPL2710087.097ENSHGLG00100019037MRPL2710083.108Heterocephalus_glaber_male
ENSG00000108826MRPL279963.043ENSHCOG00000002137mrpl279960.584Hippocampus_comes
ENSG00000108826MRPL279964.130ENSIPUG00000003799mrpl2710062.416Ictalurus_punctatus
ENSG00000108826MRPL2710087.097ENSSTOG00000008896MRPL2710081.081Ictidomys_tridecemlineatus
ENSG00000108826MRPL2710085.135ENSJJAG00000006271Mrpl2710085.135Jaculus_jaculus
ENSG00000108826MRPL2710063.441ENSKMAG00000002075mrpl279663.194Kryptolebias_marmoratus
ENSG00000108826MRPL279966.304ENSLBEG00000027521mrpl279664.583Labrus_bergylta
ENSG00000108826MRPL279966.304ENSLACG00000015193MRPL279861.486Latimeria_chalumnae
ENSG00000108826MRPL279867.033ENSLOCG00000011095mrpl2710062.000Lepisosteus_oculatus
ENSG00000108826MRPL2710088.172ENSLAFG00000018289MRPL2710086.486Loxodonta_africana
ENSG00000108826MRPL2710090.323ENSMFAG00000008788-10089.189Macaca_fascicularis
ENSG00000108826MRPL2710097.849ENSMFAG00000031691MRPL2710095.946Macaca_fascicularis
ENSG00000108826MRPL2710090.323ENSMMUG00000030700-10089.189Macaca_mulatta
ENSG00000108826MRPL2710097.849ENSMMUG00000017231-8893.007Macaca_mulatta
ENSG00000108826MRPL2710097.849ENSMNEG00000020495MRPL2710097.849Macaca_nemestrina
ENSG00000108826MRPL2710097.849ENSMLEG00000038438MRPL2710097.849Mandrillus_leucophaeus
ENSG00000108826MRPL279966.304ENSMAMG00000020279mrpl279962.838Mastacembelus_armatus
ENSG00000108826MRPL279967.391ENSMZEG00005003425mrpl2710063.333Maylandia_zebra
ENSG00000108826MRPL2710068.817ENSMGAG00000009149MRPL278870.312Meleagris_gallopavo
ENSG00000108826MRPL2710088.172ENSMAUG00000015242Mrpl2710085.075Mesocricetus_auratus
ENSG00000108826MRPL2710091.398ENSMICG00000009698MRPL2710089.865Microcebus_murinus
ENSG00000108826MRPL2710087.097ENSMOCG00000013199-10083.108Microtus_ochrogaster
ENSG00000108826MRPL2710081.720ENSMOCG00000013020-9873.282Microtus_ochrogaster
ENSG00000108826MRPL279863.736ENSMMOG00000000774mrpl279551.773Mola_mola
ENSG00000108826MRPL2710083.871ENSMODG00000020899MRPL279274.324Monodelphis_domestica
ENSG00000108826MRPL279965.217ENSMALG00000015780mrpl2710059.732Monopterus_albus
ENSG00000108826MRPL2710087.097MGP_CAROLIEiJ_G0016989Mrpl2710082.432Mus_caroli
ENSG00000108826MRPL2710088.172ENSMUSG00000024414Mrpl2710083.108Mus_musculus
ENSG00000108826MRPL2710087.097MGP_PahariEiJ_G0018120Mrpl279982.313Mus_pahari
ENSG00000108826MRPL2710087.097MGP_SPRETEiJ_G0017835Mrpl279981.633Mus_spretus
ENSG00000108826MRPL2710088.172ENSMPUG00000015445MRPL2710084.459Mustela_putorius_furo
ENSG00000108826MRPL2710091.398ENSMLUG00000005539MRPL2710085.811Myotis_lucifugus
ENSG00000108826MRPL2710090.323ENSNGAG00000011345Mrpl2710083.784Nannospalax_galili
ENSG00000108826MRPL279967.391ENSNBRG00000011848mrpl2710062.667Neolamprologus_brichardi
ENSG00000108826MRPL2710098.925ENSNLEG00000009044MRPL2710098.925Nomascus_leucogenys
ENSG00000108826MRPL2710083.871ENSMEUG00000004697MRPL279880.153Notamacropus_eugenii
ENSG00000108826MRPL2710088.172ENSOPRG00000013236MRPL278584.328Ochotona_princeps
ENSG00000108826MRPL2710084.946ENSODEG00000016720MRPL2710080.405Octodon_degus
ENSG00000108826MRPL279967.391ENSONIG00000019508mrpl2710062.667Oreochromis_niloticus
ENSG00000108826MRPL2710080.645ENSOANG00000030806MRPL278673.050Ornithorhynchus_anatinus
ENSG00000108826MRPL2710087.097ENSOCUG00000004601MRPL2710084.459Oryctolagus_cuniculus
ENSG00000108826MRPL279762.222ENSORLG00000014738mrpl279458.571Oryzias_latipes
ENSG00000108826MRPL279662.921ENSORLG00020015667mrpl279856.552Oryzias_latipes_hni
ENSG00000108826MRPL279661.798ENSORLG00015013520mrpl279855.862Oryzias_latipes_hsok
ENSG00000108826MRPL279966.304ENSOMEG00000018425mrpl279160.667Oryzias_melastigma
ENSG00000108826MRPL2710084.946ENSOGAG00000029263-10081.081Otolemur_garnettii
ENSG00000108826MRPL2710078.495ENSOGAG00000033367-9975.342Otolemur_garnettii
ENSG00000108826MRPL2710089.247ENSOGAG00000005385-9286.667Otolemur_garnettii
ENSG00000108826MRPL2710090.323ENSOARG00000004651MRPL2710085.811Ovis_aries
ENSG00000108826MRPL27100100.000ENSPPAG00000037578MRPL27100100.000Pan_paniscus
ENSG00000108826MRPL2710089.247ENSPPRG00000009444MRPL2710089.247Panthera_pardus
ENSG00000108826MRPL2710089.247ENSPTIG00000019684MRPL2710089.247Panthera_tigris_altaica
ENSG00000108826MRPL27100100.000ENSPTRG00000009396MRPL27100100.000Pan_troglodytes
ENSG00000108826MRPL2710097.849ENSPANG00000022492-10095.270Papio_anubis
ENSG00000108826MRPL2710096.774ENSPANG00000019883-10094.595Papio_anubis
ENSG00000108826MRPL2710070.968ENSPKIG00000011006mrpl2710063.087Paramormyrops_kingsleyae
ENSG00000108826MRPL2710070.968ENSPKIG00000009252MRPL2710063.087Paramormyrops_kingsleyae
ENSG00000108826MRPL279967.391ENSPSIG00000006901MRPL279168.613Pelodiscus_sinensis
ENSG00000108826MRPL279963.043ENSPMGG00000019079mrpl279860.403Periophthalmus_magnuspinnatus
ENSG00000108826MRPL2710089.247ENSPEMG00000020655Mrpl2710085.135Peromyscus_maniculatus_bairdii
ENSG00000108826MRPL2710062.366ENSPFOG00000019153-9359.441Poecilia_formosa
ENSG00000108826MRPL2710062.366ENSPFOG00000006380mrpl279359.441Poecilia_formosa
ENSG00000108826MRPL2710063.441ENSPLAG00000019989mrpl279360.140Poecilia_latipinna
ENSG00000108826MRPL2710063.441ENSPMEG00000017133mrpl279360.140Poecilia_mexicana
ENSG00000108826MRPL2710063.441ENSPMEG00000002546-9360.140Poecilia_mexicana
ENSG00000108826MRPL2710064.516ENSPREG00000017321mrpl279360.839Poecilia_reticulata
ENSG00000108826MRPL2710098.925ENSPPYG00000008286MRPL279898.649Pongo_abelii
ENSG00000108826MRPL2710081.720ENSPCAG00000002469MRPL2710082.836Procavia_capensis
ENSG00000108826MRPL2710092.473ENSPCOG00000014496MRPL2710089.189Propithecus_coquereli
ENSG00000108826MRPL2710090.323ENSPVAG00000016582MRPL278684.444Pteropus_vampyrus
ENSG00000108826MRPL279967.391ENSPNYG00000008975mrpl2710063.333Pundamilia_nyererei
ENSG00000108826MRPL2710062.366ENSPNAG00000010722mrpl2710060.403Pygocentrus_nattereri
ENSG00000108826MRPL2710088.172ENSRNOG00000003724Mrpl2710081.081Rattus_norvegicus
ENSG00000108826MRPL2710096.774ENSRBIG00000033398MRPL2710093.243Rhinopithecus_bieti
ENSG00000108826MRPL2710096.774ENSRROG00000030847MRPL2710093.243Rhinopithecus_roxellana
ENSG00000108826MRPL2710083.158ENSSBOG00000033685-9083.158Saimiri_boliviensis_boliviensis
ENSG00000108826MRPL2710090.323ENSSBOG00000016577-10088.514Saimiri_boliviensis_boliviensis
ENSG00000108826MRPL2710083.871ENSSHAG00000004216MRPL278878.261Sarcophilus_harrisii
ENSG00000108826MRPL2710072.043ENSSFOG00015000879mrpl2710063.333Scleropages_formosus
ENSG00000108826MRPL2710063.441ENSSMAG00000001706mrpl279962.500Scophthalmus_maximus
ENSG00000108826MRPL279960.870ENSSDUG00000013202mrpl2710057.333Seriola_dumerili
ENSG00000108826MRPL279960.870ENSSLDG00000011922mrpl2710057.333Seriola_lalandi_dorsalis
ENSG00000108826MRPL279956.296ENSSARG00000000254MRPL2710058.209Sorex_araneus
ENSG00000108826MRPL279968.478ENSSPUG00000010135MRPL279164.493Sphenodon_punctatus
ENSG00000108826MRPL279965.217ENSSPAG00000020495mrpl279662.500Stegastes_partitus
ENSG00000108826MRPL2710091.398ENSSSCG00000023783MRPL2710087.162Sus_scrofa
ENSG00000108826MRPL2710070.968ENSTGUG00000008925MRPL279872.093Taeniopygia_guttata
ENSG00000108826MRPL279760.000ENSTRUG00000024146mrpl278163.025Takifugu_rubripes
ENSG00000108826MRPL279964.130ENSTNIG00000019792mrpl279966.935Tetraodon_nigroviridis
ENSG00000108826MRPL2710090.323ENSTBEG00000015816MRPL2710087.162Tupaia_belangeri
ENSG00000108826MRPL2710089.247ENSTTRG00000000202MRPL278687.313Tursiops_truncatus
ENSG00000108826MRPL2710088.172ENSUAMG00000011300MRPL2710083.784Ursus_americanus
ENSG00000108826MRPL2710088.172ENSUMAG00000014818MRPL276283.704Ursus_maritimus
ENSG00000108826MRPL2710088.172ENSVVUG00000000165-10088.172Vulpes_vulpes
ENSG00000108826MRPL2710063.441ENSXETG00000027422mrpl2710063.636Xenopus_tropicalis
ENSG00000108826MRPL2710064.516ENSXCOG00000003196mrpl277068.852Xiphophorus_couchianus
ENSG00000108826MRPL2710064.516ENSXMAG00000024261mrpl279362.238Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0003735structural constituent of ribosome11279069.NASFunction
GO:0005515protein binding25416956.IPIFunction
GO:0005739mitochondrion28892042.IDAComponent
GO:0005743mitochondrial inner membrane-TASComponent
GO:0005762mitochondrial large ribosomal subunit21873635.IBAComponent
GO:0005762mitochondrial large ribosomal subunit25278503.28892042.IDAComponent
GO:0005762mitochondrial large ribosomal subunit11279069.NASComponent
GO:0006412translation11279069.NASProcess
GO:0070125mitochondrial translational elongation-TASProcess
GO:0070126mitochondrial translational termination-TASProcess

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