EuRBPDB

Description

Ensembl ID: ENSG00000111011 (Gene tree)
Gene ID: 65117
Gene Symbol: RSRC2
Alias: FLJ11021
Full Name: arginine and serine rich coiled-coil 2
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 23,556 bases
Position: chr12:122,503,458-122,527,013
Accession: 30559
RBP type: non-canonical RBP
Summary: (Arginine And Serine Rich Coiled-Coil 2) is a Protein Coding gene. An important paralog of this gene is SRSF4.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000532695	RSRC2-220	2001	-	ENSP00000436515	76 (aa)	-	E9PI52
ENST00000527461	RSRC2-213	711	-	-	- (aa)	-	-
ENST00000344591	RSRC2-202	936	XM_005253604	ENSP00000343315	236 (aa)	XP_005253661	E1B6W4
ENST00000527796	RSRC2-214	3156	-	-	- (aa)	-	-
ENST00000525387	RSRC2-208	980	-	-	- (aa)	-	-
ENST00000525335	RSRC2-207	1146	-	-	- (aa)	-	-
ENST00000524399	RSRC2-205	625	-	-	- (aa)	-	-
ENST00000331738	RSRC2-201	3520	XM_005253601	ENSP00000330188	434 (aa)	XP_005253658	Q7L4I2
ENST00000525332	RSRC2-206	516	-	-	- (aa)	-	-
ENST00000531389	RSRC2-217	1376	-	-	- (aa)	-	-
ENST00000526560	RSRC2-210	545	-	ENSP00000446470	91 (aa)	-	F5GYD2
ENST00000528263	RSRC2-215	792	-	ENSP00000444159	176 (aa)	-	H0YGP9
ENST00000531639	RSRC2-218	522	-	-	- (aa)	-	-
ENST00000528279	RSRC2-216	562	-	ENSP00000445664	25 (aa)	-	F5H1Z2
ENST00000532186	RSRC2-219	554	-	-	- (aa)	-	-
ENST00000433877	RSRC2-204	1956	-	ENSP00000412148	76 (aa)	-	E9PI52
ENST00000525570	RSRC2-209	553	-	-	- (aa)	-	-
ENST00000527399	RSRC2-212	1041	-	ENSP00000432725	76 (aa)	-	E9PI52
ENST00000527173	RSRC2-211	2570	-	-	- (aa)	-	-
ENST00000392442	RSRC2-203	928	-	-	- (aa)	-	-

Gene Model

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000111011	Child Development Disorders, Pervasive	2.8861500E-005	-
ENSG00000111011	Neuroticism	6E-6	27089181

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000111011	rs12818552	12	122504296	A	Neuroticism	27089181	[0.0091-0.0229] unit decrease	0.015980817	EFO_0007660

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000111011	RSRC2	100	96.203	ENSMUSG00000029422	Rsrc2	100	98.522	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22681889.	HDA	Function