EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000113966 (Gene tree)
Gene ID
84100
Gene Symbol
ARL6
Alias
RP55|BBS3
Full Name
ADP ribosylation factor like GTPase 6
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
36,722 bases
Position
chr3:97,764,521-97,801,242
Accession
13210
RBP type
canonical RBP
Summary
The protein encoded by this gene belongs to the ARF-like (ADP ribosylation factor-like) sub-family of the ARF family of GTP-binding proteins which are involved in regulation of intracellular traffic. Mutations in this gene are associated with Bardet-Biedl syndrome (BBS). A vision-specific transcript, encoding long isoform BBS3L, has been described (PMID: 20333246). [provided by RefSeq, Apr 2016]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000337722MMR_HSR1PF01926.235e-0611
ENSP00000377756MMR_HSR1PF01926.235e-0611
ENSP00000419619MMR_HSR1PF01926.235e-0611
ENSP00000418740MMR_HSR1PF01926.236.6e-0611
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000493990ARL6-2061705-ENSP00000418057186 (aa)-Q9H0F7
ENST00000335979ARL6-2011630XM_017007312ENSP00000337722186 (aa)XP_016862801Q9H0F7
ENST00000476753ARL6-205675-ENSP0000041993454 (aa)-H7C5H6
ENST00000494363ARL6-207553--- (aa)--
ENST00000462412ARL6-203894-ENSP00000418740121 (aa)-C9IZ13
ENST00000496713ARL6-208851--- (aa)--
ENST00000463745ARL6-2044231-ENSP00000419619186 (aa)-Q9H0F7
ENST00000631834ARL6-209557-ENSP00000488530147 (aa)-A0A0J9YXT0
ENST00000394206ARL6-2021590XM_017007311ENSP00000377756186 (aa)XP_016862800Q9H0F7
Gene Model
Click here to download ENSG00000113966's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000113966Platelet Function Tests1.9439000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000113966's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000113966ARL69894.340ENSAPOG00000024515ARL610088.172Acanthochromis_polyacanthus
ENSG00000113966ARL69884.874ENSAPOG00000016893-9783.708Acanthochromis_polyacanthus
ENSG00000113966ARL698100.000ENSAMEG00000013671ARL610096.703Ailuropoda_melanoleuca
ENSG00000113966ARL69896.226ENSACIG00000022050ARL67588.202Amphilophus_citrinellus
ENSG00000113966ARL610083.471ENSACIG00000000945-9784.831Amphilophus_citrinellus
ENSG00000113966ARL69884.034ENSAOCG00000008262-9783.708Amphiprion_ocellaris
ENSG00000113966ARL69894.340ENSAOCG00000003575ARL610088.172Amphiprion_ocellaris
ENSG00000113966ARL69894.340ENSAPEG00000020063ARL610088.172Amphiprion_percula
ENSG00000113966ARL69884.034ENSAPEG00000012838-9483.425Amphiprion_percula
ENSG00000113966ARL610083.471ENSATEG00000001425-9782.873Anabas_testudineus
ENSG00000113966ARL610091.736ENSAPLG00000004069ARL610090.323Anas_platyrhynchos
ENSG00000113966ARL610088.430ENSACAG00000009179ARL69390.055Anolis_carolinensis
ENSG00000113966ARL610096.694ENSANAG00000032648-10096.237Aotus_nancymaae
ENSG00000113966ARL69896.226ENSANAG00000031061-10092.473Aotus_nancymaae
ENSG00000113966ARL69896.226ENSACLG00000024656ARL610087.097Astatotilapia_calliptera
ENSG00000113966ARL610083.471ENSACLG00000020245-9882.065Astatotilapia_calliptera
ENSG00000113966ARL69894.340ENSAMXG00000035902ARL610088.172Astyanax_mexicanus
ENSG00000113966ARL610095.161ENSBTAG00000010091ARL610095.161Bos_taurus
ENSG00000113966ARL610050.413WBGene00000193arl-69544.751Caenorhabditis_elegans
ENSG00000113966ARL610096.694ENSCJAG00000008542ARL610096.855Callithrix_jacchus
ENSG00000113966ARL698100.000ENSCAFG00000009111ARL610097.849Canis_familiaris
ENSG00000113966ARL698100.000ENSCAFG00020009819ARL610097.849Canis_lupus_dingo
ENSG00000113966ARL610094.215ENSCHIG00000017792ARL69992.896Capra_hircus
ENSG00000113966ARL698100.000ENSTSYG00000001257ARL610096.774Carlito_syrichta
ENSG00000113966ARL698100.000ENSCAPG00000007819ARL69197.041Cavia_aperea
ENSG00000113966ARL69898.113ENSCPOG00000005344ARL610095.161Cavia_porcellus
ENSG00000113966ARL610099.462ENSCATG00000031356ARL610099.462Cercocebus_atys
ENSG00000113966ARL698100.000ENSCLAG00000011788ARL610095.161Chinchilla_lanigera
ENSG00000113966ARL610099.462ENSCSAG00000005966ARL610099.462Chlorocebus_sabaeus
ENSG00000113966ARL69896.226ENSCPBG00000005852ARL69392.818Chrysemys_picta_bellii
ENSG00000113966ARL69965.405ENSCING00000015355-10065.405Ciona_intestinalis
ENSG00000113966ARL69459.429ENSCING00000004657-9459.429Ciona_intestinalis
ENSG00000113966ARL610066.116ENSCSAVG00000000015-10061.053Ciona_savignyi
ENSG00000113966ARL610082.258ENSCANG00000029903ARL610082.258Colobus_angolensis_palliatus
ENSG00000113966ARL69898.113ENSCGRG00001021791Arl610094.624Cricetulus_griseus_chok1gshd
ENSG00000113966ARL69898.113ENSCGRG00000002022Arl610094.624Cricetulus_griseus_crigri
ENSG00000113966ARL69892.453ENSCSEG00000005784ARL610086.022Cynoglossus_semilaevis
ENSG00000113966ARL69580.870ENSCSEG00000013136-8662.921Cynoglossus_semilaevis
ENSG00000113966ARL69881.132ENSCVAG00000016249ARL69276.571Cyprinodon_variegatus
ENSG00000113966ARL69892.453ENSCVAG00000015183ARL610087.634Cyprinodon_variegatus
ENSG00000113966ARL69892.453ENSDARG00000032056arl610088.172Danio_rerio
ENSG00000113966ARL610096.599ENSDNOG00000032833ARL610096.237Dasypus_novemcinctus
ENSG00000113966ARL698100.000ENSDORG00000009252Arl610094.624Dipodomys_ordii
ENSG00000113966ARL69860.377FBgn0034446Arl69155.738Drosophila_melanogaster
ENSG00000113966ARL610057.025ENSEBUG00000011004arl610051.613Eptatretus_burgeri
ENSG00000113966ARL610098.347ENSEASG00005010902ARL610097.849Equus_asinus_asinus
ENSG00000113966ARL69696.552ENSEEUG00000005325ARL66296.552Erinaceus_europaeus
ENSG00000113966ARL69890.566ENSELUG00000002496-10087.634Esox_lucius
ENSG00000113966ARL610085.124ENSELUG00000000269ARL610071.795Esox_lucius
ENSG00000113966ARL610096.237ENSFCAG00000023205ARL610096.237Felis_catus
ENSG00000113966ARL69894.340ENSFALG00000001644ARL68491.011Ficedula_albicollis
ENSG00000113966ARL698100.000ENSFDAG00000013592ARL610096.237Fukomys_damarensis
ENSG00000113966ARL610083.471ENSFHEG00000009562-9084.831Fundulus_heteroclitus
ENSG00000113966ARL69894.340ENSFHEG00000000850ARL610089.247Fundulus_heteroclitus
ENSG00000113966ARL610088.430ENSGMOG00000002486-10086.559Gadus_morhua
ENSG00000113966ARL69883.019ENSGMOG00000007007ARL69381.921Gadus_morhua
ENSG00000113966ARL610091.736ENSGALG00000019215ARL610090.323Gallus_gallus
ENSG00000113966ARL69890.566ENSGAFG00000012355ARL610087.634Gambusia_affinis
ENSG00000113966ARL69877.358ENSGAFG00000011077-9973.864Gambusia_affinis
ENSG00000113966ARL69892.453ENSGACG00000015382ARL610087.097Gasterosteus_aculeatus
ENSG00000113966ARL610081.818ENSGACG00000006779-9982.065Gasterosteus_aculeatus
ENSG00000113966ARL69896.226ENSGAGG00000010966ARL610091.398Gopherus_agassizii
ENSG00000113966ARL6100100.000ENSGGOG00000005474ARL6100100.000Gorilla_gorilla
ENSG00000113966ARL69896.226ENSHBUG00000002695ARL69389.937Haplochromis_burtoni
ENSG00000113966ARL610083.471ENSHBUG00000002834-9882.065Haplochromis_burtoni
ENSG00000113966ARL698100.000ENSHGLG00000001077ARL610096.237Heterocephalus_glaber_female
ENSG00000113966ARL698100.000ENSHGLG00100014402ARL610096.237Heterocephalus_glaber_male
ENSG00000113966ARL69888.679ENSHCOG00000003724ARL69184.831Hippocampus_comes
ENSG00000113966ARL69883.051ENSHCOG00000019844-9180.899Hippocampus_comes
ENSG00000113966ARL610090.083ENSIPUG00000024239ARL69278.090Ictalurus_punctatus
ENSG00000113966ARL698100.000ENSSTOG00000028777ARL610097.312Ictidomys_tridecemlineatus
ENSG00000113966ARL698100.000ENSJJAG00000014206Arl610095.699Jaculus_jaculus
ENSG00000113966ARL610084.298ENSKMAG00000000815-9485.083Kryptolebias_marmoratus
ENSG00000113966ARL69894.340ENSKMAG00000000362ARL610088.710Kryptolebias_marmoratus
ENSG00000113966ARL69892.453ENSLBEG00000010881ARL69787.097Labrus_bergylta
ENSG00000113966ARL69883.898ENSLBEG00000027842-8881.215Labrus_bergylta
ENSG00000113966ARL69886.792ENSLACG00000016480-10077.957Latimeria_chalumnae
ENSG00000113966ARL69894.340ENSLOCG00000010419arl610090.055Lepisosteus_oculatus
ENSG00000113966ARL610098.639ENSLAFG00000011730ARL69396.667Loxodonta_africana
ENSG00000113966ARL610099.462ENSMFAG00000035901ARL610099.462Macaca_fascicularis
ENSG00000113966ARL610099.462ENSMMUG00000038349ARL610099.462Macaca_mulatta
ENSG00000113966ARL610099.462ENSMNEG00000032712ARL610099.462Macaca_nemestrina
ENSG00000113966ARL610099.462ENSMLEG00000044308ARL610099.462Mandrillus_leucophaeus
ENSG00000113966ARL69892.453ENSMAMG00000002718ARL610088.172Mastacembelus_armatus
ENSG00000113966ARL69879.245ENSMAMG00000018088-9673.711Mastacembelus_armatus
ENSG00000113966ARL610083.471ENSMZEG00005010769-9882.065Maylandia_zebra
ENSG00000113966ARL69896.226ENSMZEG00005002556ARL610087.097Maylandia_zebra
ENSG00000113966ARL610091.736ENSMGAG00000014417ARL610089.840Meleagris_gallopavo
ENSG00000113966ARL698100.000ENSMAUG00000016932Arl610095.699Mesocricetus_auratus
ENSG00000113966ARL698100.000ENSMICG00000048962ARL610096.237Microcebus_murinus
ENSG00000113966ARL698100.000ENSMOCG00000022581Arl610096.237Microtus_ochrogaster
ENSG00000113966ARL69892.453ENSMMOG00000017848ARL69287.640Mola_mola
ENSG00000113966ARL610082.645ENSMMOG00000005765-8978.495Mola_mola
ENSG00000113966ARL610094.624ENSMODG00000017010ARL610094.624Monodelphis_domestica
ENSG00000113966ARL69879.661ENSMALG00000004143ARL69977.901Monopterus_albus
ENSG00000113966ARL69892.453ENSMALG00000016513ARL610086.559Monopterus_albus
ENSG00000113966ARL69898.113MGP_CAROLIEiJ_G0020853Arl610095.699Mus_caroli
ENSG00000113966ARL610095.868ENSMUSG00000022722Arl610095.699Mus_musculus
ENSG00000113966ARL69898.113MGP_PahariEiJ_G0016558Arl610095.699Mus_pahari
ENSG00000113966ARL69898.113MGP_SPRETEiJ_G0021760Arl610095.699Mus_spretus
ENSG00000113966ARL698100.000ENSMPUG00000002675ARL69397.238Mustela_putorius_furo
ENSG00000113966ARL698100.000ENSNGAG00000000832Arl610095.161Nannospalax_galili
ENSG00000113966ARL610083.471ENSNBRG00000004364-9484.530Neolamprologus_brichardi
ENSG00000113966ARL69896.226ENSNBRG00000017591ARL68788.202Neolamprologus_brichardi
ENSG00000113966ARL6100100.000ENSNLEG00000027577ARL6100100.000Nomascus_leucogenys
ENSG00000113966ARL698100.000ENSOPRG00000015714ARL610097.312Ochotona_princeps
ENSG00000113966ARL698100.000ENSODEG00000000685ARL610096.237Octodon_degus
ENSG00000113966ARL69981.379ENSONIG00000004329-9477.273Oreochromis_niloticus
ENSG00000113966ARL69896.226ENSONIG00000003098ARL610087.097Oreochromis_niloticus
ENSG00000113966ARL69896.226ENSOANG00000007539ARL610093.548Ornithorhynchus_anatinus
ENSG00000113966ARL698100.000ENSOCUG00000029293ARL610096.774Oryctolagus_cuniculus
ENSG00000113966ARL610080.992ENSORLG00000015588-8979.032Oryzias_latipes
ENSG00000113966ARL69890.566ENSORLG00000005063ARL610086.559Oryzias_latipes
ENSG00000113966ARL69881.513ENSORLG00020003428-7578.495Oryzias_latipes_hni
ENSG00000113966ARL69890.566ENSORLG00020015550ARL69988.398Oryzias_latipes_hni
ENSG00000113966ARL610080.992ENSORLG00015004725-9679.032Oryzias_latipes_hsok
ENSG00000113966ARL69890.566ENSORLG00015014133ARL610086.559Oryzias_latipes_hsok
ENSG00000113966ARL610081.818ENSOMEG00000023152-9579.570Oryzias_melastigma
ENSG00000113966ARL69892.453ENSOMEG00000017204ARL610087.097Oryzias_melastigma
ENSG00000113966ARL69898.113ENSOGAG00000000536ARL69993.478Otolemur_garnettii
ENSG00000113966ARL610094.215ENSOARG00000017430ARL69294.944Ovis_aries
ENSG00000113966ARL6100100.000ENSPPAG00000043743ARL6100100.000Pan_paniscus
ENSG00000113966ARL610096.774ENSPPRG00000018780ARL610096.774Panthera_pardus
ENSG00000113966ARL610096.774ENSPTIG00000008500ARL610096.774Panthera_tigris_altaica
ENSG00000113966ARL6100100.000ENSPTRG00000015139ARL6100100.000Pan_troglodytes
ENSG00000113966ARL610099.462ENSPANG00000007238ARL610099.462Papio_anubis
ENSG00000113966ARL69896.226ENSPKIG00000021369arl610090.323Paramormyrops_kingsleyae
ENSG00000113966ARL610091.736ENSPSIG00000008221ARL610090.860Pelodiscus_sinensis
ENSG00000113966ARL610079.339ENSPMGG00000014527-9878.090Periophthalmus_magnuspinnatus
ENSG00000113966ARL610086.777ENSPMGG00000008663ARL69186.517Periophthalmus_magnuspinnatus
ENSG00000113966ARL698100.000ENSPEMG00000021089Arl610096.774Peromyscus_maniculatus_bairdii
ENSG00000113966ARL610095.161ENSPCIG00000010456ARL610095.161Phascolarctos_cinereus
ENSG00000113966ARL69877.358ENSPFOG00000006540-9174.872Poecilia_formosa
ENSG00000113966ARL610088.430ENSPFOG00000008534ARL69487.845Poecilia_formosa
ENSG00000113966ARL610080.165ENSPLAG00000012234-9082.022Poecilia_latipinna
ENSG00000113966ARL610087.603ENSPLAG00000008306ARL610086.559Poecilia_latipinna
ENSG00000113966ARL610080.992ENSPMEG00000014418-9082.584Poecilia_mexicana
ENSG00000113966ARL610088.430ENSPMEG00000008489ARL610087.097Poecilia_mexicana
ENSG00000113966ARL69890.566ENSPREG00000021943ARL69986.413Poecilia_reticulata
ENSG00000113966ARL610080.992ENSPREG00000013042-9082.584Poecilia_reticulata
ENSG00000113966ARL69896.226ENSPNYG00000004054ARL69389.937Pundamilia_nyererei
ENSG00000113966ARL69881.132ENSPNYG00000016273-9976.650Pundamilia_nyererei
ENSG00000113966ARL69896.226ENSPNAG00000024137ARL610088.710Pygocentrus_nattereri
ENSG00000113966ARL698100.000ENSRNOG00000001689Arl610095.161Rattus_norvegicus
ENSG00000113966ARL610099.462ENSRBIG00000031963ARL610099.462Rhinopithecus_bieti
ENSG00000113966ARL610099.462ENSRROG00000041416ARL610099.462Rhinopithecus_roxellana
ENSG00000113966ARL610097.521ENSSBOG00000031045ARL610096.774Saimiri_boliviensis_boliviensis
ENSG00000113966ARL610094.624ENSSHAG00000007402ARL610094.624Sarcophilus_harrisii
ENSG00000113966ARL69896.226ENSSFOG00015023135arl610090.323Scleropages_formosus
ENSG00000113966ARL69888.679ENSSFOG00015004083arl610081.026Scleropages_formosus
ENSG00000113966ARL69879.245ENSSMAG00000007588-10074.877Scophthalmus_maximus
ENSG00000113966ARL69894.340ENSSMAG00000021333ARL610087.634Scophthalmus_maximus
ENSG00000113966ARL69894.340ENSSDUG00000006652ARL68979.290Seriola_dumerili
ENSG00000113966ARL610082.645ENSSDUG00000013427-9982.873Seriola_dumerili
ENSG00000113966ARL69883.019ENSSLDG00000023797ARL69975.758Seriola_lalandi_dorsalis
ENSG00000113966ARL69894.340ENSSLDG00000000746ARL610088.172Seriola_lalandi_dorsalis
ENSG00000113966ARL69896.226ENSSPUG00000009412ARL610090.860Sphenodon_punctatus
ENSG00000113966ARL69894.340ENSSPAG00000017528ARL610087.634Stegastes_partitus
ENSG00000113966ARL69879.245ENSSPAG00000013916-9776.963Stegastes_partitus
ENSG00000113966ARL698100.000ENSSSCG00000027278ARL610097.849Sus_scrofa
ENSG00000113966ARL69894.340ENSTGUG00000013497ARL610089.247Taeniopygia_guttata
ENSG00000113966ARL69894.340ENSTRUG00000017239ARL610088.710Takifugu_rubripes
ENSG00000113966ARL610081.818ENSTRUG00000003716-7978.495Takifugu_rubripes
ENSG00000113966ARL69894.340ENSTNIG00000009430ARL610088.172Tetraodon_nigroviridis
ENSG00000113966ARL69877.358ENSTNIG00000004395ARL69573.737Tetraodon_nigroviridis
ENSG00000113966ARL610096.694ENSTBEG00000002112ARL610095.699Tupaia_belangeri
ENSG00000113966ARL69696.552ENSTTRG00000001601ARL610073.656Tursiops_truncatus
ENSG00000113966ARL698100.000ENSUAMG00000004582ARL610097.849Ursus_americanus
ENSG00000113966ARL698100.000ENSUMAG00000013919ARL610097.849Ursus_maritimus
ENSG00000113966ARL698100.000ENSVPAG00000011377ARL610097.312Vicugna_pacos
ENSG00000113966ARL610099.320ENSVVUG00000021551ARL68598.387Vulpes_vulpes
ENSG00000113966ARL610080.165ENSXMAG00000003438-9082.022Xiphophorus_maculatus
ENSG00000113966ARL69892.453ENSXMAG00000021202ARL610088.172Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005515protein binding20603001.22139371.25443296.IPIFunction
GO:0005525GTP binding21873635.IBAFunction
GO:0005543phospholipid binding-ISSFunction
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm-ISSComponent
GO:0005829cytosol-IEAComponent
GO:0005879axonemal microtubule-ISSComponent
GO:0005886plasma membrane-TASComponent
GO:0005929cilium22139371.IDAComponent
GO:0005929cilium17646400.IDAComponent
GO:0005929cilium-TASComponent
GO:0005930axoneme21873635.IBAComponent
GO:0005930axoneme-ISSComponent
GO:0006612protein targeting to membrane-ISSProcess
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0007368determination of left/right symmetry-ISSProcess
GO:0007420brain development-IEAProcess
GO:0007601visual perception-IEAProcess
GO:0008589regulation of smoothened signaling pathway-IEAProcess
GO:0010842retina layer formation-IEAProcess
GO:0016020membrane-ISSComponent
GO:0016055Wnt signaling pathway20207729.IMPProcess
GO:0016192vesicle-mediated transport21873635.IBAProcess
GO:0030117membrane coat-ISSComponent
GO:0032402melanosome transport-ISSProcess
GO:0045444fat cell differentiation-IEAProcess
GO:0046872metal ion binding-IEAFunction
GO:0051258protein polymerization-ISSProcess
GO:0060271cilium assembly21873635.IBAProcess
GO:0060271cilium assembly20207729.IMPProcess
GO:0060271cilium assembly-ISSProcess
GO:0061512protein localization to cilium21873635.IBAProcess
GO:0061512protein localization to cilium22139371.IMPProcess
GO:0070062extracellular exosome19056867.HDAComponent
GO:0097499protein localization to non-motile cilium-IEAProcess
GO:1903445protein transport from ciliary membrane to plasma membrane-IEAProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us