EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000115421 (Gene tree)
Gene ID
64895
Gene Symbol
PAPOLG
Alias
FLJ12972
Full Name
poly(A) polymerase gamma
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
45,857 bases
Position
chr2:60,756,230-60,802,086
Accession
14982
RBP type
canonical RBP
Summary
This gene encodes a member of the poly(A) polymerase family which catalyzes template-independent extension of the 3' end of a DNA/RNA strand. This enzyme shares 60% identity to the well characterized poly(A) polymerase II (PAPII) at the amino acid level. These two enzymes have similar organization of structural and functional domains. This enzyme is exclusively localized in the nucleus and exhibits both nonspecific and CPSF (cleavage and polyadenylation specificity factor)/AAUAAA-dependent polyadenylation activity. This gene is located on chromosome 2 in contrast to the PAPII gene, which is located on chromosome 14. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000405570PAP_RNA-bindPF04926.155.9e-2812
ENSP00000405570PAP_RNA-bindPF04926.155.9e-2822
ENSP00000238714PAP_RNA-bindPF04926.153.1e-2712
ENSP00000238714PAP_RNA-bindPF04926.153.1e-2722
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000453839PAPOLG-2043324-ENSP00000414070168 (aa)-H7C3W0
ENST00000483370PAPOLG-206539--- (aa)--
ENST00000470208PAPOLG-205686--- (aa)--
ENST00000238714PAPOLG-2014263XM_005264500ENSP00000238714736 (aa)XP_005264557Q9BWT3
ENST00000414060PAPOLG-2033511-ENSP00000405599234 (aa)-F8WAT4
ENST00000496283PAPOLG-2074193--- (aa)--
ENST00000412217PAPOLG-2026074XM_011533041ENSP00000405570382 (aa)XP_011531343A0A0C4DH56
Gene Model
Click here to download ENSG00000115421's gene model file
Pathways
Pathway IDPathway NameSource
hsa03015mRNA surveillance pathwayKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000115421Nutritional and Metabolic Diseases1.6560000E-005-
ENSG00000115421Platelet Function Tests1.7702200E-005-
ENSG00000115421Eicosapentaenoic Acid8E-626584805
ENSG00000115421Psoriasis4E-1225574825
ENSG00000115421Hodgkin Disease3E-624920014
ENSG00000115421Hodgkin Disease1E-624149102
ENSG00000115421Alzheimer Disease2E-926830138
ENSG00000115421Age of Onset2E-926830138
ENSG00000115421Hodgkin Disease2E-821037568
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000115421rs2099613260756834TPlasma omega-3 polyunsaturated fatty acid level (eicosapentaenoic acid)26584805[0.086-0.219] unit increase0.1525EFO_0007760
ENSG00000115421rs116386746260791380CEducational attainment (MTAG)30038396[0.018-0.034] unit increase0.0259EFO_0004784
ENSG00000115421rs116386746260791380CEducational attainment (years of education)30038396[0.016-0.034] unit increase0.0249EFO_0004784
ENSG00000115421rs62149377260759441GSystemic lupus erythematosus28714469[1.09-1.19]1.14EFO_0002690
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000115421's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000115421PAPOLG10078.632ENSG00000218823PAPOLB8073.031
ENSG00000115421PAPOLG10081.197ENSG00000090060PAPOLA9483.158
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000115421PAPOLG10087.607ENSAPOG00000004798papolg9970.963Acanthochromis_polyacanthus
ENSG00000115421PAPOLG100100.000ENSAMEG00000018227PAPOLG10094.309Ailuropoda_melanoleuca
ENSG00000115421PAPOLG10087.607ENSACIG00000010546papolg9970.054Amphilophus_citrinellus
ENSG00000115421PAPOLG10087.607ENSAOCG00000010254papolg8972.727Amphiprion_ocellaris
ENSG00000115421PAPOLG10087.607ENSAPEG00000006944papolg8972.861Amphiprion_percula
ENSG00000115421PAPOLG10087.607ENSATEG00000009007papolg9771.037Anabas_testudineus
ENSG00000115421PAPOLG10091.880ENSAPLG00000006813PAPOLG9973.684Anas_platyrhynchos
ENSG00000115421PAPOLG10060.533ENSACAG00000015048-10065.239Anolis_carolinensis
ENSG00000115421PAPOLG100100.000ENSANAG00000024627PAPOLG10098.098Aotus_nancymaae
ENSG00000115421PAPOLG10087.179ENSACLG00000015592papolg8970.274Astatotilapia_calliptera
ENSG00000115421PAPOLG10087.179ENSAMXG00000004611papolg10072.980Astyanax_mexicanus
ENSG00000115421PAPOLG10099.145ENSBTAG00000007414PAPOLG10094.602Bos_taurus
ENSG00000115421PAPOLG100100.000ENSCJAG00000009102PAPOLG10098.370Callithrix_jacchus
ENSG00000115421PAPOLG10099.573ENSCAFG00000002975PAPOLG10091.473Canis_familiaris
ENSG00000115421PAPOLG100100.000ENSCAFG00020026859PAPOLG10093.842Canis_lupus_dingo
ENSG00000115421PAPOLG10099.145ENSCHIG00000015082PAPOLG10094.467Capra_hircus
ENSG00000115421PAPOLG100100.000ENSTSYG00000004947PAPOLG10096.356Carlito_syrichta
ENSG00000115421PAPOLG9886.957ENSCAPG00000014901-10091.864Cavia_aperea
ENSG00000115421PAPOLG100100.000ENSCPOG00000010306PAPOLG10095.682Cavia_porcellus
ENSG00000115421PAPOLG100100.000ENSCCAG00000026893PAPOLG10098.505Cebus_capucinus
ENSG00000115421PAPOLG10092.857ENSCATG00000044395PAPOLG10098.701Cercocebus_atys
ENSG00000115421PAPOLG100100.000ENSCLAG00000008603PAPOLG10095.007Chinchilla_lanigera
ENSG00000115421PAPOLG100100.000ENSCSAG00000014408PAPOLG10098.505Chlorocebus_sabaeus
ENSG00000115421PAPOLG10085.086ENSCHOG00000014028PAPOLG10093.627Choloepus_hoffmanni
ENSG00000115421PAPOLG10069.231ENSCING00000024664-9464.752Ciona_intestinalis
ENSG00000115421PAPOLG10070.085ENSCSAVG00000009085-9765.361Ciona_savignyi
ENSG00000115421PAPOLG100100.000ENSCANG00000038120PAPOLG10098.641Colobus_angolensis_palliatus
ENSG00000115421PAPOLG10099.573ENSCGRG00001014951Papolg10093.179Cricetulus_griseus_chok1gshd
ENSG00000115421PAPOLG10099.573ENSCGRG00000005552-10093.179Cricetulus_griseus_crigri
ENSG00000115421PAPOLG10087.607ENSCSEG00000000771papolg9970.889Cynoglossus_semilaevis
ENSG00000115421PAPOLG10086.752ENSCVAG00000016602papolg8985.030Cyprinodon_variegatus
ENSG00000115421PAPOLG10087.607ENSDARG00000012141papolg10073.677Danio_rerio
ENSG00000115421PAPOLG10099.573ENSDNOG00000011326PAPOLG10093.657Dasypus_novemcinctus
ENSG00000115421PAPOLG100100.000ENSDORG00000016228Papolg10099.068Dipodomys_ordii
ENSG00000115421PAPOLG9973.848ENSETEG00000011815PAPOLG9973.784Echinops_telfairi
ENSG00000115421PAPOLG9857.205ENSEBUG00000005042-8057.325Eptatretus_burgeri
ENSG00000115421PAPOLG6171.503ENSEBUG00000004020papolg9171.503Eptatretus_burgeri
ENSG00000115421PAPOLG100100.000ENSEASG00005002038PAPOLG10095.277Equus_asinus_asinus
ENSG00000115421PAPOLG100100.000ENSECAG00000009859PAPOLG9894.715Equus_caballus
ENSG00000115421PAPOLG10083.671ENSEEUG00000006196PAPOLG10083.671Erinaceus_europaeus
ENSG00000115421PAPOLG10086.325ENSELUG00000014497papolg9964.671Esox_lucius
ENSG00000115421PAPOLG100100.000ENSFCAG00000026126PAPOLG10094.467Felis_catus
ENSG00000115421PAPOLG10082.479ENSFALG00000011079PAPOLG9765.344Ficedula_albicollis
ENSG00000115421PAPOLG100100.000ENSFDAG00000010662PAPOLG9795.007Fukomys_damarensis
ENSG00000115421PAPOLG10055.269ENSFHEG00000019080papolg9063.473Fundulus_heteroclitus
ENSG00000115421PAPOLG10087.179ENSGMOG00000018772papolg9284.095Gadus_morhua
ENSG00000115421PAPOLG10089.744ENSGALG00000007853PAPOLG10070.306Gallus_gallus
ENSG00000115421PAPOLG10086.752ENSGAFG00000003263papolg8969.332Gambusia_affinis
ENSG00000115421PAPOLG10087.607ENSGACG00000002718papolg10072.074Gasterosteus_aculeatus
ENSG00000115421PAPOLG100100.000ENSGGOG00000006083PAPOLG10099.457Gorilla_gorilla
ENSG00000115421PAPOLG10087.179ENSHBUG00000004882papolg8970.404Haplochromis_burtoni
ENSG00000115421PAPOLG100100.000ENSHGLG00000019610PAPOLG10094.851Heterocephalus_glaber_female
ENSG00000115421PAPOLG100100.000ENSHGLG00100010429PAPOLG9995.277Heterocephalus_glaber_male
ENSG00000115421PAPOLG10086.752ENSHCOG00000006782papolg8970.856Hippocampus_comes
ENSG00000115421PAPOLG10088.034ENSIPUG00000021642papolg10073.128Ictalurus_punctatus
ENSG00000115421PAPOLG100100.000ENSSTOG00000010861PAPOLG10096.491Ictidomys_tridecemlineatus
ENSG00000115421PAPOLG10099.573ENSJJAG00000015601Papolg10098.834Jaculus_jaculus
ENSG00000115421PAPOLG10086.325ENSKMAG00000016439papolg9769.377Kryptolebias_marmoratus
ENSG00000115421PAPOLG10086.752ENSLBEG00000023218papolg9868.374Labrus_bergylta
ENSG00000115421PAPOLG9990.558ENSLACG00000009543PAPOLG10070.761Latimeria_chalumnae
ENSG00000115421PAPOLG10088.034ENSLOCG00000016130papolg10073.298Lepisosteus_oculatus
ENSG00000115421PAPOLG10099.573ENSLAFG00000010404PAPOLG10098.135Loxodonta_africana
ENSG00000115421PAPOLG100100.000ENSMFAG00000042450PAPOLG10098.505Macaca_fascicularis
ENSG00000115421PAPOLG100100.000ENSMMUG00000000498PAPOLG10098.505Macaca_mulatta
ENSG00000115421PAPOLG9598.125ENSMNEG00000035939PAPOLG10089.744Macaca_nemestrina
ENSG00000115421PAPOLG100100.000ENSMLEG00000039462PAPOLG10098.370Mandrillus_leucophaeus
ENSG00000115421PAPOLG10087.607ENSMAMG00000010667papolg9970.081Mastacembelus_armatus
ENSG00000115421PAPOLG10087.179ENSMZEG00005018140papolg9971.034Maylandia_zebra
ENSG00000115421PAPOLG10088.511ENSMGAG00000001741PAPOLG10070.509Meleagris_gallopavo
ENSG00000115421PAPOLG10099.573ENSMAUG00000009088Papolg9993.042Mesocricetus_auratus
ENSG00000115421PAPOLG100100.000ENSMICG00000010042PAPOLG10096.060Microcebus_murinus
ENSG00000115421PAPOLG10099.145ENSMOCG00000006857Papolg10093.514Microtus_ochrogaster
ENSG00000115421PAPOLG10087.179ENSMMOG00000008020papolg9972.267Mola_mola
ENSG00000115421PAPOLG10097.009ENSMODG00000002160PAPOLG9986.997Monodelphis_domestica
ENSG00000115421PAPOLG10088.034ENSMALG00000007012papolg8972.727Monopterus_albus
ENSG00000115421PAPOLG10099.573MGP_CAROLIEiJ_G0016144Papolg9999.299Mus_caroli
ENSG00000115421PAPOLG10099.573ENSMUSG00000020273Papolg9999.299Mus_musculus
ENSG00000115421PAPOLG10099.573MGP_PahariEiJ_G0016746Papolg10093.522Mus_pahari
ENSG00000115421PAPOLG10099.573MGP_SPRETEiJ_G0016987Papolg9999.299Mus_spretus
ENSG00000115421PAPOLG100100.000ENSMPUG00000005165PAPOLG9094.467Mustela_putorius_furo
ENSG00000115421PAPOLG10099.573ENSMLUG00000009853PAPOLG10093.861Myotis_lucifugus
ENSG00000115421PAPOLG100100.000ENSNGAG00000001120Papolg10095.277Nannospalax_galili
ENSG00000115421PAPOLG10087.179ENSNBRG00000011943papolg9964.011Neolamprologus_brichardi
ENSG00000115421PAPOLG100100.000ENSNLEG00000009507-10099.534Nomascus_leucogenys
ENSG00000115421PAPOLG63100.000ENSMEUG00000013605-8779.452Notamacropus_eugenii
ENSG00000115421PAPOLG10099.573ENSOPRG00000009630PAPOLG10094.602Ochotona_princeps
ENSG00000115421PAPOLG10092.735ENSODEG00000012424PAPOLG10094.131Octodon_degus
ENSG00000115421PAPOLG10087.179ENSONIG00000002985papolg10066.309Oreochromis_niloticus
ENSG00000115421PAPOLG10097.009ENSOANG00000012403PAPOLG9985.523Ornithorhynchus_anatinus
ENSG00000115421PAPOLG100100.000ENSOCUG00000004962PAPOLG10096.356Oryctolagus_cuniculus
ENSG00000115421PAPOLG10086.325ENSORLG00000001577papolg8970.439Oryzias_latipes
ENSG00000115421PAPOLG10086.325ENSORLG00020002482papolg8970.761Oryzias_latipes_hni
ENSG00000115421PAPOLG10086.325ENSORLG00015008836papolg8970.439Oryzias_latipes_hsok
ENSG00000115421PAPOLG10087.179ENSOMEG00000001406papolg8970.267Oryzias_melastigma
ENSG00000115421PAPOLG10093.282ENSOGAG00000003145PAPOLG10088.837Otolemur_garnettii
ENSG00000115421PAPOLG10099.145ENSOARG00000001563PAPOLG9194.332Ovis_aries
ENSG00000115421PAPOLG100100.000ENSPPAG00000019917PAPOLG100100.000Pan_paniscus
ENSG00000115421PAPOLG100100.000ENSPPRG00000023250PAPOLG10094.467Panthera_pardus
ENSG00000115421PAPOLG100100.000ENSPTIG00000018126PAPOLG10094.332Panthera_tigris_altaica
ENSG00000115421PAPOLG100100.000ENSPTRG00000011948PAPOLG100100.000Pan_troglodytes
ENSG00000115421PAPOLG10094.309ENSPANG00000014543PAPOLG10094.309Papio_anubis
ENSG00000115421PAPOLG10085.897ENSPKIG00000003313papolg10072.630Paramormyrops_kingsleyae
ENSG00000115421PAPOLG10084.615ENSPKIG00000006027PAPOLG9970.563Paramormyrops_kingsleyae
ENSG00000115421PAPOLG10092.308ENSPSIG00000013663PAPOLG9979.380Pelodiscus_sinensis
ENSG00000115421PAPOLG10099.573ENSPEMG00000008960-10092.769Peromyscus_maniculatus_bairdii
ENSG00000115421PAPOLG9957.322ENSPMAG00000002961papolg9952.318Petromyzon_marinus
ENSG00000115421PAPOLG10069.231ENSPMAG00000004864-9663.599Petromyzon_marinus
ENSG00000115421PAPOLG10097.436ENSPCIG00000028094PAPOLG10086.916Phascolarctos_cinereus
ENSG00000115421PAPOLG10086.752ENSPFOG00000012909papolg9969.272Poecilia_formosa
ENSG00000115421PAPOLG10086.752ENSPLAG00000018445papolg8969.617Poecilia_latipinna
ENSG00000115421PAPOLG10086.752ENSPMEG00000003961papolg8969.841Poecilia_mexicana
ENSG00000115421PAPOLG10086.752ENSPREG00000010358papolg8968.906Poecilia_reticulata
ENSG00000115421PAPOLG100100.000ENSPPYG00000012392PAPOLG10099.049Pongo_abelii
ENSG00000115421PAPOLG10093.162ENSPCAG00000012297PAPOLG10081.633Procavia_capensis
ENSG00000115421PAPOLG100100.000ENSPCOG00000027306PAPOLG10084.480Propithecus_coquereli
ENSG00000115421PAPOLG100100.000ENSPVAG00000013541PAPOLG8994.991Pteropus_vampyrus
ENSG00000115421PAPOLG10087.179ENSPNYG00000006729papolg9970.755Pundamilia_nyererei
ENSG00000115421PAPOLG10086.752ENSPNAG00000015521papolg10073.510Pygocentrus_nattereri
ENSG00000115421PAPOLG10099.145ENSRNOG00000006261Papolg10093.117Rattus_norvegicus
ENSG00000115421PAPOLG9598.742ENSRBIG00000040086PAPOLG10092.391Rhinopithecus_bieti
ENSG00000115421PAPOLG100100.000ENSRROG00000035954PAPOLG10098.370Rhinopithecus_roxellana
ENSG00000115421PAPOLG100100.000ENSSBOG00000026194PAPOLG10098.234Saimiri_boliviensis_boliviensis
ENSG00000115421PAPOLG10097.436ENSSHAG00000014942PAPOLG9987.660Sarcophilus_harrisii
ENSG00000115421PAPOLG10077.119ENSSFOG00015011874papolg10064.005Scleropages_formosus
ENSG00000115421PAPOLG10084.188ENSSFOG00015002383papolg10069.512Scleropages_formosus
ENSG00000115421PAPOLG10087.607ENSSMAG00000015598papolg9567.920Scophthalmus_maximus
ENSG00000115421PAPOLG10087.607ENSSDUG00000000912papolg9970.692Seriola_dumerili
ENSG00000115421PAPOLG10087.607ENSSLDG00000001217papolg9967.557Seriola_lalandi_dorsalis
ENSG00000115421PAPOLG10094.017ENSSPUG00000007491PAPOLG10079.467Sphenodon_punctatus
ENSG00000115421PAPOLG10087.607ENSSPAG00000009004papolg9970.421Stegastes_partitus
ENSG00000115421PAPOLG10099.573ENSSSCG00000008389PAPOLG10095.412Sus_scrofa
ENSG00000115421PAPOLG10081.624ENSTGUG00000006762PAPOLG9876.880Taeniopygia_guttata
ENSG00000115421PAPOLG10085.897ENSTRUG00000006410papolg9970.963Takifugu_rubripes
ENSG00000115421PAPOLG10071.548ENSTNIG00000017106papolg10066.491Tetraodon_nigroviridis
ENSG00000115421PAPOLG100100.000ENSTBEG00000002609PAPOLG10088.163Tupaia_belangeri
ENSG00000115421PAPOLG10099.145ENSTTRG00000006237PAPOLG10090.148Tursiops_truncatus
ENSG00000115421PAPOLG100100.000ENSUAMG00000011088PAPOLG10094.270Ursus_americanus
ENSG00000115421PAPOLG100100.000ENSUMAG00000019081PAPOLG9094.270Ursus_maritimus
ENSG00000115421PAPOLG9999.571ENSVPAG00000000492PAPOLG10091.293Vicugna_pacos
ENSG00000115421PAPOLG100100.000ENSVVUG00000010344PAPOLG9994.737Vulpes_vulpes
ENSG00000115421PAPOLG10087.179ENSXETG00000002208papolg10075.066Xenopus_tropicalis
ENSG00000115421PAPOLG10085.532ENSXCOG00000006611papolg7385.484Xiphophorus_couchianus
ENSG00000115421PAPOLG10086.383ENSXMAG00000007383papolg9982.897Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-IEAFunction
GO:0004652polynucleotide adenylyltransferase activity21873635.IBAFunction
GO:0004652polynucleotide adenylyltransferase activity11463842.IDAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus11463842.IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005829cytosol-IDAComponent
GO:0006378mRNA polyadenylation21873635.IBAProcess
GO:0016020membrane19946888.HDAComponent
GO:0016604nuclear body-IDAComponent
GO:0043631RNA polyadenylation11287430.11463842.IDAProcess
GO:0046872metal ion binding24076191.IDAFunction

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