EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000116221 (Gene tree)
Gene ID
51253
Gene Symbol
MRPL37
Alias
RPML2|MRP-L2
Full Name
mitochondrial ribosomal protein L37
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
42,642 bases
Position
chr1:54,184,041-54,226,682
Accession
14034
RBP type
canonical RBP
Summary
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000354086PDCD9PF07147.124.3e-0911
ENSP00000473980PDCD9PF07147.121.1e-0811
ENSP00000338526PDCD9PF07147.122.8e-0811
ENSP00000392216PDCD9PF07147.124.6e-0811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000487096MRPL37-204747--- (aa)--
ENST00000336230MRPL37-2011179-ENSP00000338526292 (aa)-A6NHR2
ENST00000605337MRPL37-2061582-ENSP00000473980483 (aa)-S4R369
ENST00000360840MRPL37-2021483-ENSP00000354086423 (aa)-Q9BZE1
ENST00000490670MRPL37-205669--- (aa)--
ENST00000398219MRPL37-203868-ENSP00000392216264 (aa)-H0Y4J2
Gene Model
Click here to download ENSG00000116221's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000116221Plaque, Atherosclerotic8E-628282560
ENSG00000116221DNA, Mitochondrial4E-625240745
ENSG00000116221Migraine Disorders8E-723793025
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000116221rs10888838154207424?Mitochondrial DNA levels25240745[NR]EFO_0006312
ENSG00000116221rs1890566154202605GMigraine23793025[1.04-1.08]1.06EFO_0003821
ENSG00000116221rs11206301154206401CCarotid plaque burden28282560[0.088-0.226] unit increase0.15703459EFO_0006501
ENSG00000116221rs11206302154208270CInterleukin-10 levels27989323[0.07-0.168] SD units increase0.1189EFO_0004750
ENSG00000116221rs144657844154185500CStem cell factor levels27989323[0.27-0.68] SD units decrease0.4778EFO_0008291
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000116221's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000116221MRPL378850.532ENSAPOG00000024187mrpl378650.532Acanthochromis_polyacanthus
ENSG00000116221MRPL3710081.324ENSAMEG00000009773MRPL379881.324Ailuropoda_melanoleuca
ENSG00000116221MRPL379149.246ENSACIG00000002717mrpl378949.246Amphilophus_citrinellus
ENSG00000116221MRPL378851.330ENSAOCG00000009023mrpl378651.330Amphiprion_ocellaris
ENSG00000116221MRPL378851.064ENSAPEG00000010957mrpl377751.064Amphiprion_percula
ENSG00000116221MRPL378951.316ENSATEG00000003789mrpl378651.316Anabas_testudineus
ENSG00000116221MRPL377564.091ENSAPLG00000003233MRPL379962.264Anas_platyrhynchos
ENSG00000116221MRPL379055.643ENSACAG00000014179MRPL377154.135Anolis_carolinensis
ENSG00000116221MRPL3710091.726ENSANAG00000026524MRPL3710091.726Aotus_nancymaae
ENSG00000116221MRPL379151.414ENSACLG00000023229mrpl379051.414Astatotilapia_calliptera
ENSG00000116221MRPL379451.759ENSAMXG00000032982mrpl379551.759Astyanax_mexicanus
ENSG00000116221MRPL3710082.979ENSBTAG00000010715MRPL3710082.979Bos_taurus
ENSG00000116221MRPL3710090.780ENSCJAG00000005018MRPL3710090.780Callithrix_jacchus
ENSG00000116221MRPL3710079.905ENSCAFG00000019035MRPL3710079.905Canis_familiaris
ENSG00000116221MRPL3710079.905ENSCAFG00020012091MRPL3710079.905Canis_lupus_dingo
ENSG00000116221MRPL3710082.270ENSCHIG00000017117-10082.270Capra_hircus
ENSG00000116221MRPL379378.680ENSCHIG00000022304-9578.680Capra_hircus
ENSG00000116221MRPL379984.834ENSTSYG00000000047MRPL379984.834Carlito_syrichta
ENSG00000116221MRPL377281.429ENSCAPG00000005739-10081.250Cavia_aperea
ENSG00000116221MRPL379980.714ENSCPOG00000011866MRPL3710080.714Cavia_porcellus
ENSG00000116221MRPL3710089.835ENSCCAG00000034961MRPL3710089.835Cebus_capucinus
ENSG00000116221MRPL3710093.381ENSCATG00000044166MRPL3710093.381Cercocebus_atys
ENSG00000116221MRPL3710082.979ENSCLAG00000010636MRPL3710082.979Chinchilla_lanigera
ENSG00000116221MRPL3710093.853ENSCSAG00000001304MRPL3710093.853Chlorocebus_sabaeus
ENSG00000116221MRPL378860.215ENSCPBG00000003477MRPL378460.054Chrysemys_picta_bellii
ENSG00000116221MRPL376933.488ENSCSAVG00000006917-6930.422Ciona_savignyi
ENSG00000116221MRPL3710093.853ENSCANG00000032925MRPL3710093.853Colobus_angolensis_palliatus
ENSG00000116221MRPL3710081.324ENSCGRG00001023385Mrpl3710081.324Cricetulus_griseus_chok1gshd
ENSG00000116221MRPL3710081.324ENSCGRG00000006208Mrpl3710081.324Cricetulus_griseus_crigri
ENSG00000116221MRPL379152.956ENSCSEG00000021591mrpl378852.956Cynoglossus_semilaevis
ENSG00000116221MRPL376850.000ENSCVAG00000018345mrpl379450.000Cyprinodon_variegatus
ENSG00000116221MRPL378952.533ENSDARG00000062916mrpl378752.533Danio_rerio
ENSG00000116221MRPL379675.369ENSDNOG00000006764MRPL379675.369Dasypus_novemcinctus
ENSG00000116221MRPL379973.460ENSDORG00000002294Mrpl379973.460Dipodomys_ordii
ENSG00000116221MRPL379976.540ENSETEG00000012078MRPL3710076.359Echinops_telfairi
ENSG00000116221MRPL378939.947ENSEBUG00000005365mrpl378539.947Eptatretus_burgeri
ENSG00000116221MRPL379985.071ENSEASG00005014577MRPL3710084.870Equus_asinus_asinus
ENSG00000116221MRPL379285.128ENSECAG00000008987MRPL379976.852Equus_caballus
ENSG00000116221MRPL375084.828ENSEEUG00000005140-10062.891Erinaceus_europaeus
ENSG00000116221MRPL378854.424ENSELUG00000023756mrpl378654.424Esox_lucius
ENSG00000116221MRPL3710083.924ENSFCAG00000029989MRPL3710083.924Felis_catus
ENSG00000116221MRPL379057.330ENSFALG00000012047MRPL379957.330Ficedula_albicollis
ENSG00000116221MRPL3710082.506ENSFDAG00000011469MRPL3710082.506Fukomys_damarensis
ENSG00000116221MRPL379151.031ENSFHEG00000006746mrpl378951.031Fundulus_heteroclitus
ENSG00000116221MRPL378859.358ENSGALG00000010761MRPL378356.177Gallus_gallus
ENSG00000116221MRPL379649.153ENSGAFG00000015107mrpl379449.153Gambusia_affinis
ENSG00000116221MRPL379150.518ENSGACG00000014661mrpl378950.518Gasterosteus_aculeatus
ENSG00000116221MRPL378861.559ENSGAGG00000014298MRPL378461.394Gopherus_agassizii
ENSG00000116221MRPL3710098.818ENSGGOG00000010511MRPL3710098.818Gorilla_gorilla
ENSG00000116221MRPL378550.000ENSHBUG00000013906mrpl378650.000Haplochromis_burtoni
ENSG00000116221MRPL3710082.270ENSHGLG00000001515MRPL3710082.270Heterocephalus_glaber_female
ENSG00000116221MRPL3710082.270ENSHGLG00100014792MRPL3710082.270Heterocephalus_glaber_male
ENSG00000116221MRPL379048.158ENSHCOG00000016367mrpl379148.158Hippocampus_comes
ENSG00000116221MRPL378953.600ENSIPUG00000013212mrpl378953.600Ictalurus_punctatus
ENSG00000116221MRPL379982.701ENSSTOG00000020118MRPL379382.506Ictidomys_tridecemlineatus
ENSG00000116221MRPL379977.725ENSJJAG00000003560Mrpl379977.725Jaculus_jaculus
ENSG00000116221MRPL377049.189ENSKMAG00000000241mrpl379046.520Kryptolebias_marmoratus
ENSG00000116221MRPL378950.263ENSLBEG00000024354mrpl378850.131Labrus_bergylta
ENSG00000116221MRPL379052.742ENSLACG00000004225MRPL378952.742Latimeria_chalumnae
ENSG00000116221MRPL378956.499ENSLOCG00000003277mrpl378556.499Lepisosteus_oculatus
ENSG00000116221MRPL3710079.907ENSLAFG00000013783MRPL3710079.907Loxodonta_africana
ENSG00000116221MRPL3710093.144ENSMFAG00000046281MRPL3710093.144Macaca_fascicularis
ENSG00000116221MRPL3710093.853ENSMMUG00000020972MRPL3710093.853Macaca_mulatta
ENSG00000116221MRPL3710093.853ENSMNEG00000036517MRPL3710093.853Macaca_nemestrina
ENSG00000116221MRPL3710093.853ENSMLEG00000025693MRPL3710093.853Mandrillus_leucophaeus
ENSG00000116221MRPL378951.187ENSMAMG00000010323mrpl379551.053Mastacembelus_armatus
ENSG00000116221MRPL379151.414ENSMZEG00005019041mrpl379051.414Maylandia_zebra
ENSG00000116221MRPL377961.562ENSMGAG00000011366MRPL379861.562Meleagris_gallopavo
ENSG00000116221MRPL3710080.615ENSMAUG00000021455Mrpl3710080.615Mesocricetus_auratus
ENSG00000116221MRPL3710080.328ENSMICG00000002201MRPL3710080.796Microcebus_murinus
ENSG00000116221MRPL3710080.378ENSMOCG00000016169Mrpl3710080.378Microtus_ochrogaster
ENSG00000116221MRPL379151.399ENSMMOG00000021410mrpl379451.269Mola_mola
ENSG00000116221MRPL379866.506ENSMODG00000021365MRPL379766.506Monodelphis_domestica
ENSG00000116221MRPL379052.468ENSMALG00000014053mrpl378852.468Monopterus_albus
ENSG00000116221MRPL3710079.433MGP_CAROLIEiJ_G0026242Mrpl3710079.433Mus_caroli
ENSG00000116221MRPL3710079.905ENSMUSG00000028622Mrpl3710079.905Mus_musculus
ENSG00000116221MRPL379979.147MGP_PahariEiJ_G0028576Mrpl3710078.960Mus_pahari
ENSG00000116221MRPL3710079.669MGP_SPRETEiJ_G0027211Mrpl3710079.669Mus_spretus
ENSG00000116221MRPL378581.389ENSMPUG00000006693MRPL3710081.389Mustela_putorius_furo
ENSG00000116221MRPL3710084.161ENSMLUG00000007735MRPL3710084.161Myotis_lucifugus
ENSG00000116221MRPL3710081.324ENSNGAG00000023680Mrpl3710081.324Nannospalax_galili
ENSG00000116221MRPL378749.465ENSNBRG00000010707mrpl378948.303Neolamprologus_brichardi
ENSG00000116221MRPL3710096.690ENSNLEG00000003319MRPL3710096.690Nomascus_leucogenys
ENSG00000116221MRPL377369.055ENSMEUG00000010112-10069.055Notamacropus_eugenii
ENSG00000116221MRPL3710080.851ENSOPRG00000001594MRPL3710080.851Ochotona_princeps
ENSG00000116221MRPL3710082.033ENSODEG00000013096MRPL3710082.033Octodon_degus
ENSG00000116221MRPL379151.928ENSONIG00000010986mrpl379051.928Oreochromis_niloticus
ENSG00000116221MRPL377352.381ENSOANG00000012247-10052.381Ornithorhynchus_anatinus
ENSG00000116221MRPL3710084.161ENSOCUG00000011305MRPL3710084.161Oryctolagus_cuniculus
ENSG00000116221MRPL379149.744ENSORLG00000007838mrpl379549.744Oryzias_latipes
ENSG00000116221MRPL379447.794ENSORLG00020014629mrpl379947.794Oryzias_latipes_hni
ENSG00000116221MRPL379448.284ENSORLG00015010564mrpl379948.284Oryzias_latipes_hsok
ENSG00000116221MRPL379150.000ENSOMEG00000003216mrpl379050.129Oryzias_melastigma
ENSG00000116221MRPL3710080.378ENSOGAG00000016578MRPL3710080.378Otolemur_garnettii
ENSG00000116221MRPL3710078.251ENSOARG00000007040MRPL379778.251Ovis_aries
ENSG00000116221MRPL3710098.965ENSPPAG00000041416MRPL3710098.965Pan_paniscus
ENSG00000116221MRPL3710083.215ENSPPRG00000014233MRPL3710083.215Panthera_pardus
ENSG00000116221MRPL3710083.452ENSPTIG00000008917MRPL3710083.452Panthera_tigris_altaica
ENSG00000116221MRPL3710099.172ENSPTRG00000000769MRPL3710099.172Pan_troglodytes
ENSG00000116221MRPL3710093.853ENSPANG00000011981MRPL3710093.853Papio_anubis
ENSG00000116221MRPL379448.000ENSPKIG00000010297mrpl379548.000Paramormyrops_kingsleyae
ENSG00000116221MRPL378460.674ENSPSIG00000002989MRPL379960.674Pelodiscus_sinensis
ENSG00000116221MRPL3710080.142ENSPEMG00000013627Mrpl3710080.142Peromyscus_maniculatus_bairdii
ENSG00000116221MRPL379467.254ENSPCIG00000023098MRPL379766.029Phascolarctos_cinereus
ENSG00000116221MRPL379050.000ENSPFOG00000013748mrpl378750.000Poecilia_formosa
ENSG00000116221MRPL379050.524ENSPLAG00000018880mrpl379250.524Poecilia_latipinna
ENSG00000116221MRPL379050.524ENSPMEG00000015821mrpl378750.524Poecilia_mexicana
ENSG00000116221MRPL379648.668ENSPREG00000010609mrpl379448.668Poecilia_reticulata
ENSG00000116221MRPL378698.052ENSPPYG00000001318-10098.052Pongo_abelii
ENSG00000116221MRPL3710082.033ENSPCAG00000016372MRPL3710082.033Procavia_capensis
ENSG00000116221MRPL3710082.270ENSPCOG00000010897MRPL3710082.270Propithecus_coquereli
ENSG00000116221MRPL3710082.742ENSPVAG00000012259MRPL3710082.742Pteropus_vampyrus
ENSG00000116221MRPL378550.275ENSPNYG00000015737mrpl378650.276Pundamilia_nyererei
ENSG00000116221MRPL379453.149ENSPNAG00000028240mrpl379553.149Pygocentrus_nattereri
ENSG00000116221MRPL3710079.196ENSRNOG00000009078Mrpl3710079.196Rattus_norvegicus
ENSG00000116221MRPL3710093.853ENSRBIG00000040736MRPL3710093.853Rhinopithecus_bieti
ENSG00000116221MRPL3710094.090ENSRROG00000032032MRPL3710094.090Rhinopithecus_roxellana
ENSG00000116221MRPL3710090.071ENSSBOG00000023958MRPL3710090.071Saimiri_boliviensis_boliviensis
ENSG00000116221MRPL377371.429ENSSHAG00000009371-10071.429Sarcophilus_harrisii
ENSG00000116221MRPL378853.887ENSSFOG00015021583mrpl378753.887Scleropages_formosus
ENSG00000116221MRPL378250.867ENSSMAG00000019958mrpl378950.867Scophthalmus_maximus
ENSG00000116221MRPL379549.265ENSSDUG00000003962mrpl379449.265Seriola_dumerili
ENSG00000116221MRPL379548.775ENSSLDG00000009714mrpl379448.775Seriola_lalandi_dorsalis
ENSG00000116221MRPL378855.348ENSSPUG00000014078MRPL379153.117Sphenodon_punctatus
ENSG00000116221MRPL379151.407ENSSPAG00000012381-8951.407Stegastes_partitus
ENSG00000116221MRPL379151.407ENSSPAG00000018025-8951.407Stegastes_partitus
ENSG00000116221MRPL3710085.106ENSSSCG00000032083MRPL3710085.106Sus_scrofa
ENSG00000116221MRPL377164.563ENSTGUG00000009406MRPL3710058.766Taeniopygia_guttata
ENSG00000116221MRPL379449.377ENSTRUG00000004786mrpl379349.254Takifugu_rubripes
ENSG00000116221MRPL379450.000ENSTNIG00000018697mrpl379250.000Tetraodon_nigroviridis
ENSG00000116221MRPL3710079.953ENSTBEG00000015974MRPL3710079.953Tupaia_belangeri
ENSG00000116221MRPL3710069.976ENSTTRG00000013316MRPL3710069.976Tursiops_truncatus
ENSG00000116221MRPL3710081.797ENSUAMG00000019453MRPL3710081.797Ursus_americanus
ENSG00000116221MRPL3710081.797ENSUMAG00000022307MRPL3710081.797Ursus_maritimus
ENSG00000116221MRPL3710079.669ENSVVUG00000026835MRPL3710079.669Vulpes_vulpes
ENSG00000116221MRPL379053.421ENSXETG00000019993mrpl379053.421Xenopus_tropicalis
ENSG00000116221MRPL379150.773ENSXCOG00000007024mrpl379350.773Xiphophorus_couchianus
ENSG00000116221MRPL379150.900ENSXMAG00000018814mrpl379050.900Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.HDAFunction
GO:0003735structural constituent of ribosome11543634.NASFunction
GO:0005739mitochondrion21873635.IBAComponent
GO:0005739mitochondrion28892042.IDAComponent
GO:0005743mitochondrial inner membrane-TASComponent
GO:0005761mitochondrial ribosome11543634.NASComponent
GO:0005762mitochondrial large ribosomal subunit25278503.28892042.IDAComponent
GO:0006412translation11543634.NASProcess
GO:0070125mitochondrial translational elongation-TASProcess
GO:0070126mitochondrial translational termination-TASProcess

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