EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000117395 (Gene tree)
Gene ID
10969
Gene Symbol
EBNA1BP2
Alias
NOBP|EBP2|P40
Full Name
EBNA1 binding protein 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
106,763 bases
Position
chr1:43,164,174-43,270,936
Accession
15531
RBP type
canonical RBP
Summary
(EBNA1 Binding Protein 2) is a Protein Coding gene.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000236051Ebp2PF05890.124.6e-8511
ENSP00000407323Ebp2PF05890.128e-8511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
7505425Yeast mitochondrial NAD(+)-dependent isocitrate dehydrogenase is an RNA-binding protein.Nucleic Acids Res1993 Nov 25Elzinga SD-
17987630Quantitative proteome analysis of cisplatin-induced apoptotic Jurkat T cells by stable isotope labeling with amino acids in cell culture, SDS-PAGE, and LC-MALDI-TOF/TOF MS.Electrophoresis2007 DecSchmidt F-
1701144A 40 kd protein binds specifically to the 5'-untranslated regions of yeast mitochondrial mRNAs.EMBO J1990 DecPapadopoulou B-
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000461557EBNA1BP2-203741--- (aa)--
ENST00000483082EBNA1BP2-208759--- (aa)--
ENST00000491223EBNA1BP2-209680--- (aa)--
ENST00000466927EBNA1BP2-205300--- (aa)--
ENST00000431635EBNA1BP2-2021503-ENSP00000407323361 (aa)-H7C2Q8
ENST00000463906EBNA1BP2-204937--- (aa)--
ENST00000474566EBNA1BP2-207732--- (aa)--
ENST00000236051EBNA1BP2-2011322-ENSP00000236051306 (aa)-Q99848
ENST00000472982EBNA1BP2-2061008--- (aa)--
Gene Model
Click here to download ENSG00000117395's gene model file
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000117395rs1210898143259573TSchizophrenia26198764[NR]1.1EFO_0000692
ENSG00000117395rs150404479143222879?Bipolar disorder (body mass index interaction)24322204EFO_0000289|EFO_0004340
ENSG00000117395rs621559143179740?Telomere length21460395[NR] unit increase0.16EFO_0004505
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000117395's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000117395EBNA1BP29758.528ENSAPOG00000011943ebna1bp29159.589Acanthochromis_polyacanthus
ENSG00000117395EBNA1BP210090.850ENSAMEG00000001772EBNA1BP210089.744Ailuropoda_melanoleuca
ENSG00000117395EBNA1BP29858.224ENSACIG00000011514ebna1bp29159.727Amphilophus_citrinellus
ENSG00000117395EBNA1BP29758.528ENSAOCG00000005324ebna1bp29159.589Amphiprion_ocellaris
ENSG00000117395EBNA1BP29758.528ENSAPEG00000011835ebna1bp29159.589Amphiprion_percula
ENSG00000117395EBNA1BP29858.940ENSATEG00000020458ebna1bp29360.137Anabas_testudineus
ENSG00000117395EBNA1BP28369.685ENSAPLG00000009109EBNA1BP29969.685Anas_platyrhynchos
ENSG00000117395EBNA1BP29771.044ENSACAG00000013204EBNA1BP29370.934Anolis_carolinensis
ENSG00000117395EBNA1BP210097.386ENSANAG00000038474EBNA1BP210097.386Aotus_nancymaae
ENSG00000117395EBNA1BP29761.130ENSACLG00000000761ebna1bp29162.329Astatotilapia_calliptera
ENSG00000117395EBNA1BP26557.071ENSAMXG00000042464EBNA1BP27756.500Astyanax_mexicanus
ENSG00000117395EBNA1BP29859.016ENSAMXG00000018885ebna1bp29360.068Astyanax_mexicanus
ENSG00000117395EBNA1BP210089.869ENSBTAG00000021544EBNA1BP210089.869Bos_taurus
ENSG00000117395EBNA1BP26940.284WBGene00015941C18A3.38339.597Caenorhabditis_elegans
ENSG00000117395EBNA1BP29396.831ENSCJAG00000003318EBNA1BP29296.831Callithrix_jacchus
ENSG00000117395EBNA1BP210090.850ENSCAFG00000005336EBNA1BP210090.850Canis_familiaris
ENSG00000117395EBNA1BP210090.850ENSCAFG00020017662EBNA1BP210090.850Canis_lupus_dingo
ENSG00000117395EBNA1BP210089.542ENSCHIG00000022065EBNA1BP210089.542Capra_hircus
ENSG00000117395EBNA1BP29991.475ENSTSYG00000003666EBNA1BP29991.475Carlito_syrichta
ENSG00000117395EBNA1BP26476.650ENSCAPG00000011832-9976.650Cavia_aperea
ENSG00000117395EBNA1BP29990.820ENSCPOG00000005187EBNA1BP29990.820Cavia_porcellus
ENSG00000117395EBNA1BP210097.712ENSCCAG00000025326EBNA1BP210097.712Cebus_capucinus
ENSG00000117395EBNA1BP210098.693ENSCATG00000037761EBNA1BP28697.784Cercocebus_atys
ENSG00000117395EBNA1BP29991.148ENSCLAG00000002547EBNA1BP29991.148Chinchilla_lanigera
ENSG00000117395EBNA1BP210098.693ENSCSAG00000001177EBNA1BP210097.507Chlorocebus_sabaeus
ENSG00000117395EBNA1BP29473.702ENSCPBG00000002595EBNA1BP29473.702Chrysemys_picta_bellii
ENSG00000117395EBNA1BP26043.169ENSCING00000013374-9942.703Ciona_intestinalis
ENSG00000117395EBNA1BP29344.755ENSCSAVG00000004452-9245.139Ciona_savignyi
ENSG00000117395EBNA1BP210099.020ENSCANG00000028459EBNA1BP210099.020Colobus_angolensis_palliatus
ENSG00000117395EBNA1BP29987.582ENSCGRG00001002074Ebna1bp29987.582Cricetulus_griseus_chok1gshd
ENSG00000117395EBNA1BP29987.582ENSCGRG00000007272Ebna1bp29987.582Cricetulus_griseus_crigri
ENSG00000117395EBNA1BP29758.746ENSCSEG00000018795ebna1bp29260.473Cynoglossus_semilaevis
ENSG00000117395EBNA1BP29859.000ENSCVAG00000004152ebna1bp29161.592Cyprinodon_variegatus
ENSG00000117395EBNA1BP29460.137ENSDARG00000054980ebna1bp29962.264Danio_rerio
ENSG00000117395EBNA1BP29991.475ENSDNOG00000024715EBNA1BP29990.968Dasypus_novemcinctus
ENSG00000117395EBNA1BP26490.355ENSDORG00000007797Ebna1bp29990.355Dipodomys_ordii
ENSG00000117395EBNA1BP27643.200FBgn0039828CG15427544.397Drosophila_melanogaster
ENSG00000117395EBNA1BP210062.092ENSETEG00000002803EBNA1BP210062.092Echinops_telfairi
ENSG00000117395EBNA1BP29351.911ENSEBUG00000011134ebna1bp29352.366Eptatretus_burgeri
ENSG00000117395EBNA1BP29989.836ENSEASG00005001399EBNA1BP29989.836Equus_asinus_asinus
ENSG00000117395EBNA1BP29990.164ENSECAG00000024179EBNA1BP29990.164Equus_caballus
ENSG00000117395EBNA1BP29985.902ENSEEUG00000003662EBNA1BP29985.902Erinaceus_europaeus
ENSG00000117395EBNA1BP29755.911ENSELUG00000021634ebna1bp29260.000Esox_lucius
ENSG00000117395EBNA1BP29990.492ENSFCAG00000022345EBNA1BP29884.483Felis_catus
ENSG00000117395EBNA1BP29267.474ENSFALG00000005658EBNA1BP29368.581Ficedula_albicollis
ENSG00000117395EBNA1BP29989.836ENSFDAG00000013559EBNA1BP29989.836Fukomys_damarensis
ENSG00000117395EBNA1BP29860.526ENSFHEG00000001475ebna1bp29161.986Fundulus_heteroclitus
ENSG00000117395EBNA1BP29260.069ENSGMOG00000004150ebna1bp29960.069Gadus_morhua
ENSG00000117395EBNA1BP29271.631ENSGALG00000009045EBNA1BP25571.181Gallus_gallus
ENSG00000117395EBNA1BP29860.596ENSGAFG00000008885ebna1bp29461.379Gambusia_affinis
ENSG00000117395EBNA1BP29757.285ENSGACG00000006802ebna1bp29658.219Gasterosteus_aculeatus
ENSG00000117395EBNA1BP29869.935ENSGAGG00000018237EBNA1BP29471.972Gopherus_agassizii
ENSG00000117395EBNA1BP210099.346ENSGGOG00000008724EBNA1BP210098.615Gorilla_gorilla
ENSG00000117395EBNA1BP29760.797ENSHBUG00000023329ebna1bp29161.986Haplochromis_burtoni
ENSG00000117395EBNA1BP29975.738ENSHGLG00000010340-9975.738Heterocephalus_glaber_female
ENSG00000117395EBNA1BP29989.508ENSHGLG00000002849-9989.508Heterocephalus_glaber_female
ENSG00000117395EBNA1BP29989.508ENSHGLG00100014766EBNA1BP29989.508Heterocephalus_glaber_male
ENSG00000117395EBNA1BP29759.197ENSHCOG00000004832ebna1bp29260.481Hippocampus_comes
ENSG00000117395EBNA1BP29262.414ENSIPUG00000013642ebna1bp29362.585Ictalurus_punctatus
ENSG00000117395EBNA1BP26591.500ENSSTOG00000004747EBNA1BP29991.500Ictidomys_tridecemlineatus
ENSG00000117395EBNA1BP29989.869ENSJJAG00000012002Ebna1bp29989.869Jaculus_jaculus
ENSG00000117395EBNA1BP29760.526ENSKMAG00000010961ebna1bp29361.695Kryptolebias_marmoratus
ENSG00000117395EBNA1BP29758.466ENSLBEG00000014254ebna1bp29460.473Labrus_bergylta
ENSG00000117395EBNA1BP29761.842ENSLOCG00000006438ebna1bp29163.176Lepisosteus_oculatus
ENSG00000117395EBNA1BP29988.235ENSLAFG00000018681EBNA1BP29987.582Loxodonta_africana
ENSG00000117395EBNA1BP210098.366ENSMFAG00000037826EBNA1BP210098.366Macaca_fascicularis
ENSG00000117395EBNA1BP210098.366ENSMMUG00000002640EBNA1BP210098.366Macaca_mulatta
ENSG00000117395EBNA1BP210098.039ENSMNEG00000029376EBNA1BP29897.826Macaca_nemestrina
ENSG00000117395EBNA1BP210098.693ENSMLEG00000028431EBNA1BP210096.953Mandrillus_leucophaeus
ENSG00000117395EBNA1BP29858.416ENSMAMG00000009561ebna1bp29160.274Mastacembelus_armatus
ENSG00000117395EBNA1BP29761.130ENSMZEG00005018968ebna1bp29162.329Maylandia_zebra
ENSG00000117395EBNA1BP28369.922ENSMGAG00000009689EBNA1BP29969.922Meleagris_gallopavo
ENSG00000117395EBNA1BP29987.908ENSMAUG00000011372Ebna1bp29987.908Mesocricetus_auratus
ENSG00000117395EBNA1BP29993.443ENSMICG00000007000EBNA1BP29993.443Microcebus_murinus
ENSG00000117395EBNA1BP29987.255ENSMOCG00000019273Ebna1bp29986.601Microtus_ochrogaster
ENSG00000117395EBNA1BP29359.655ENSMMOG00000001755ebna1bp29460.068Mola_mola
ENSG00000117395EBNA1BP28675.191ENSMODG00000011412EBNA1BP28676.494Monodelphis_domestica
ENSG00000117395EBNA1BP29756.856ENSMALG00000017391ebna1bp29458.562Monopterus_albus
ENSG00000117395EBNA1BP29984.967MGP_CAROLIEiJ_G0026381Ebna1bp29984.967Mus_caroli
ENSG00000117395EBNA1BP29985.294ENSMUSG00000028729Ebna1bp29985.294Mus_musculus
ENSG00000117395EBNA1BP29985.294MGP_PahariEiJ_G0028712Ebna1bp29985.294Mus_pahari
ENSG00000117395EBNA1BP29984.967MGP_SPRETEiJ_G0027353Ebna1bp29984.967Mus_spretus
ENSG00000117395EBNA1BP29991.475ENSMPUG00000013779EBNA1BP29991.475Mustela_putorius_furo
ENSG00000117395EBNA1BP29989.836ENSMLUG00000003809-9989.836Myotis_lucifugus
ENSG00000117395EBNA1BP29191.697ENSMLUG00000011409-9991.697Myotis_lucifugus
ENSG00000117395EBNA1BP210088.274ENSNGAG00000019110Ebna1bp210088.274Nannospalax_galili
ENSG00000117395EBNA1BP29761.462ENSNBRG00000018937ebna1bp29162.671Neolamprologus_brichardi
ENSG00000117395EBNA1BP26897.571ENSNLEG00000013236-9497.571Nomascus_leucogenys
ENSG00000117395EBNA1BP29759.396ENSMEUG00000010924-9759.862Notamacropus_eugenii
ENSG00000117395EBNA1BP29962.418ENSOPRG00000016032-9962.418Ochotona_princeps
ENSG00000117395EBNA1BP29990.492ENSODEG00000001868EBNA1BP29990.492Octodon_degus
ENSG00000117395EBNA1BP29761.462ENSONIG00000008855ebna1bp29162.671Oreochromis_niloticus
ENSG00000117395EBNA1BP29276.325ENSOANG00000001141EBNA1BP29276.325Ornithorhynchus_anatinus
ENSG00000117395EBNA1BP29990.820ENSOCUG00000005103EBNA1BP29990.820Oryctolagus_cuniculus
ENSG00000117395EBNA1BP29760.067ENSORLG00000010609ebna1bp29161.246Oryzias_latipes
ENSG00000117395EBNA1BP29760.067ENSORLG00020009809ebna1bp29161.246Oryzias_latipes_hni
ENSG00000117395EBNA1BP29759.732ENSORLG00015005799ebna1bp29160.900Oryzias_latipes_hsok
ENSG00000117395EBNA1BP29361.754ENSOMEG00000008553ebna1bp29162.069Oryzias_melastigma
ENSG00000117395EBNA1BP27363.274ENSOGAG00000028686-9363.801Otolemur_garnettii
ENSG00000117395EBNA1BP29785.669ENSOGAG00000002687-9786.275Otolemur_garnettii
ENSG00000117395EBNA1BP27789.407ENSOARG00000020502EBNA1BP210089.407Ovis_aries
ENSG00000117395EBNA1BP2100100.000ENSPPAG00000038260EBNA1BP210099.723Pan_paniscus
ENSG00000117395EBNA1BP29990.820ENSPPRG00000005080EBNA1BP29990.820Panthera_pardus
ENSG00000117395EBNA1BP29990.492ENSPTIG00000006570EBNA1BP29990.492Panthera_tigris_altaica
ENSG00000117395EBNA1BP2100100.000ENSPTRG00000000625EBNA1BP210099.723Pan_troglodytes
ENSG00000117395EBNA1BP210099.020ENSPANG00000015351EBNA1BP210097.507Papio_anubis
ENSG00000117395EBNA1BP29365.854ENSPKIG00000011907ebna1bp29366.781Paramormyrops_kingsleyae
ENSG00000117395EBNA1BP29473.103ENSPSIG00000003073EBNA1BP28473.103Pelodiscus_sinensis
ENSG00000117395EBNA1BP29458.763ENSPMGG00000010627ebna1bp29159.932Periophthalmus_magnuspinnatus
ENSG00000117395EBNA1BP29596.774ENSPEMG00000014135Ebna1bp29896.774Peromyscus_maniculatus_bairdii
ENSG00000117395EBNA1BP29876.000ENSPCIG00000013641EBNA1BP27477.163Phascolarctos_cinereus
ENSG00000117395EBNA1BP29860.984ENSPFOG00000006385ebna1bp28662.116Poecilia_formosa
ENSG00000117395EBNA1BP29860.265ENSPLAG00000001407ebna1bp29461.379Poecilia_latipinna
ENSG00000117395EBNA1BP29860.656ENSPMEG00000000536ebna1bp29461.775Poecilia_mexicana
ENSG00000117395EBNA1BP29860.656ENSPREG00000021076ebna1bp29461.775Poecilia_reticulata
ENSG00000117395EBNA1BP27797.881ENSPPYG00000001456-10097.881Pongo_abelii
ENSG00000117395EBNA1BP25191.026ENSPCAG00000000977-5191.026Procavia_capensis
ENSG00000117395EBNA1BP29994.098ENSPCOG00000023100EBNA1BP29994.098Propithecus_coquereli
ENSG00000117395EBNA1BP210090.523ENSPVAG00000011448EBNA1BP210090.523Pteropus_vampyrus
ENSG00000117395EBNA1BP29761.130ENSPNYG00000017056ebna1bp29162.329Pundamilia_nyererei
ENSG00000117395EBNA1BP29662.752ENSPNAG00000017674ebna1bp29364.483Pygocentrus_nattereri
ENSG00000117395EBNA1BP29986.645ENSRNOG00000050287Ebna1bp29989.055Rattus_norvegicus
ENSG00000117395EBNA1BP29986.645ENSRNOG00000045760LOC1083480809989.055Rattus_norvegicus
ENSG00000117395EBNA1BP210099.346ENSRBIG00000034587EBNA1BP210098.338Rhinopithecus_bieti
ENSG00000117395EBNA1BP210099.346ENSRROG00000012178EBNA1BP210098.338Rhinopithecus_roxellana
ENSG00000117395EBNA1BP210097.712ENSSBOG00000033483EBNA1BP210097.712Saimiri_boliviensis_boliviensis
ENSG00000117395EBNA1BP25481.325ENSSHAG00000004300-9981.325Sarcophilus_harrisii
ENSG00000117395EBNA1BP29264.184ENSSFOG00015000181ebna1bp29363.889Scleropages_formosus
ENSG00000117395EBNA1BP29757.860ENSSMAG00000020600ebna1bp28859.247Scophthalmus_maximus
ENSG00000117395EBNA1BP29360.616ENSSDUG00000013791ebna1bp29161.017Seriola_dumerili
ENSG00000117395EBNA1BP29759.000ENSSLDG00000001599ebna1bp29160.410Seriola_lalandi_dorsalis
ENSG00000117395EBNA1BP29974.013ENSSARG00000013397EBNA1BP29974.013Sorex_araneus
ENSG00000117395EBNA1BP29563.087ENSSPUG00000007065EBNA1BP29363.087Sphenodon_punctatus
ENSG00000117395EBNA1BP29758.784ENSSPAG00000005176ebna1bp29159.862Stegastes_partitus
ENSG00000117395EBNA1BP29988.525ENSSSCG00000030177EBNA1BP29988.525Sus_scrofa
ENSG00000117395EBNA1BP28368.199ENSTGUG00000016447-9969.466Taeniopygia_guttata
ENSG00000117395EBNA1BP29268.056ENSTGUG00000007072-9668.814Taeniopygia_guttata
ENSG00000117395EBNA1BP29756.522ENSTRUG00000018483ebna1bp29357.192Takifugu_rubripes
ENSG00000117395EBNA1BP29758.863ENSTNIG00000018092ebna1bp29460.616Tetraodon_nigroviridis
ENSG00000117395EBNA1BP29975.082ENSTBEG00000011855EBNA1BP29975.082Tupaia_belangeri
ENSG00000117395EBNA1BP29989.508ENSTTRG00000008056EBNA1BP29989.508Tursiops_truncatus
ENSG00000117395EBNA1BP210090.850ENSUAMG00000024165EBNA1BP210090.850Ursus_americanus
ENSG00000117395EBNA1BP210090.523ENSUMAG00000024357EBNA1BP210090.523Ursus_maritimus
ENSG00000117395EBNA1BP27774.370ENSVPAG00000002132EBNA1BP210074.370Vicugna_pacos
ENSG00000117395EBNA1BP210090.850ENSVVUG00000008712EBNA1BP210090.850Vulpes_vulpes
ENSG00000117395EBNA1BP29967.857ENSXETG00000009545ebna1bp29369.521Xenopus_tropicalis
ENSG00000117395EBNA1BP29858.170ENSXCOG00000007104ebna1bp29258.844Xiphophorus_couchianus
ENSG00000117395EBNA1BP29959.344ENSXMAG00000011341ebna1bp29561.053Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005634nucleus-IDAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus16263084.IDAComponent
GO:0006364rRNA processing21873635.IBAProcess
GO:0030687preribosome, large subunit precursor21873635.IBAComponent
GO:0034399nuclear periphery21873635.IBAComponent
GO:0042273ribosomal large subunit biogenesis21873635.IBAProcess

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