EuRBPDB

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000121390 (Gene tree)
Gene ID: 55269
Gene Symbol: PSPC1
Alias: PSP1|FLJ10955
Full Name: paraspeckle component 1
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 108,268 bases
Position: chr13:19,674,752-19,783,019
Accession: 20320
RBP type: canonical RBP
Summary: This gene encodes a nucleolar protein that localizes to punctate subnuclear structures that occur close to splicing speckles, known as paraspeckles. These paraspeckles are composed of RNA-protein structures that include a non-coding RNA, NEAT1/Men epsilon/beta, and the Drosophila Behavior Human Splicing family of proteins, which include the product of this gene and the P54NRB/NONO and PSF/SFPQ proteins. Paraspeckles may function in the control of gene expression via an RNA nuclear retention mechanism. The protein encoded by this gene is found in paraspeckles in transcriptionally active cells, but it localizes to unique cap structures at the nucleolar periphery when RNA polymerase II transcription is inhibited, or during telophase. Alternative splicing of this gene results in multiple transcript variants. A related pseudogene, which is also located on chromosome 13, has been identified. [provided by RefSeq, Aug 2011]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000393069	RRM_1	PF00076.22	1.2e-32	1	2
ENSP00000393069	RRM_1	PF00076.22	1.2e-32	2	2
ENSP00000343966	RRM_1	PF00076.22	1e-31	1	2
ENSP00000343966	RRM_1	PF00076.22	1e-31	2	2
ENSP00000481916	RRM_1	PF00076.22	1e-31	1	2
ENSP00000481916	RRM_1	PF00076.22	1e-31	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	NascentRICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
19217333	An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.	Mol Cell	2009 Mar 27	Clemson CM	doi: 10.1016/j.molcel.2009.01.026
12810069	p54nrb acts as a transcriptional coactivator for activation function 1 of the human androgen receptor.	Biochem Biophys Res Commun	2003 Jul 4	Ishitani K	-
9529527	Suppressors of the temperature sensitivity of DNA polymerase alpha mutations in Saccharomyces cerevisiae.	Mol Gen Genet	1998 Feb	Formosa T	-
16148043	P54nrb forms a heterodimer with PSP1 that localizes to paraspeckles in an RNA-dependent manner.	Mol Biol Cell	2005 Nov	Fox AH	-
28192372	RNA-binding protein PSPC1 promotes the differentiation-dependent nuclear export of adipocyte RNAs.	J Clin Invest	2017 Mar 1	Wang J	doi: 10.1172/JCI89484
29483655	RNA-dependent chromatin targeting of TET2 for endogenous retrovirus control in pluripotent stem cells.	Nat Genet	2018 Mar	Guallar D	doi: 10.1038/s41588-018-0060-9

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000497722	PSPC1-205	448	-	-	- (aa)	-	-
ENST00000635251	PSPC1-207	2285	-	-	- (aa)	-	-
ENST00000619300	PSPC1-206	2013	-	ENSP00000481916	523 (aa)	-	Q8WXF1
ENST00000427943	PSPC1-202	866	-	ENSP00000393069	248 (aa)	-	X6RDA4
ENST00000338910	PSPC1-201	2407	XM_011535137	ENSP00000343966	523 (aa)	XP_011533439	Q8WXF1
ENST00000471658	PSPC1-203	1647	-	ENSP00000436038	393 (aa)	-	Q8WXF1
ENST00000635562	PSPC1-208	422	-	ENSP00000488975	33 (aa)	-	A0A0U1RQF9
ENST00000492741	PSPC1-204	1709	XM_011535139	ENSP00000435921	393 (aa)	XP_011533441	Q8WXF1

Gene Model

Click here to download ENSG00000121390's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000121390	Methadone	9E-6	28115739
ENSG00000121390	Opioid-Related Disorders	9E-6	28115739

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000121390's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000121390	PSPC1	53	30.345	ENSG00000254535	PABPC4L	91	30.345
ENSG00000121390	PSPC1	80	74.528	ENSG00000116560	SFPQ	85	63.776
ENSG00000121390	PSPC1	54	34.641	ENSG00000177733	HNRNPA0	50	34.641
ENSG00000121390	PSPC1	91	59.072	ENSG00000147140	NONO	99	75.377

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000121390	PSPC1	82	81.173	ENSAPOG00000015946	pspc1	79	73.721	Acanthochromis_polyacanthus
ENSG00000121390	PSPC1	100	98.662	ENSAMEG00000017420	PSPC1	100	98.662	Ailuropoda_melanoleuca
ENSG00000121390	PSPC1	99	63.137	ENSACIG00000018695	pspc1	87	59.660	Amphilophus_citrinellus
ENSG00000121390	PSPC1	82	80.556	ENSAOCG00000005279	pspc1	78	73.256	Amphiprion_ocellaris
ENSG00000121390	PSPC1	82	80.556	ENSAPEG00000015927	pspc1	79	73.256	Amphiprion_percula
ENSG00000121390	PSPC1	75	75.806	ENSATEG00000004878	pspc1	76	61.928	Anabas_testudineus
ENSG00000121390	PSPC1	77	93.812	ENSAPLG00000006246	PSPC1	100	93.812	Anas_platyrhynchos
ENSG00000121390	PSPC1	80	75.786	ENSAPLG00000003643	SFPQ	69	69.126	Anas_platyrhynchos
ENSG00000121390	PSPC1	99	83.302	ENSACAG00000002093	PSPC1	88	91.845	Anolis_carolinensis
ENSG00000121390	PSPC1	75	74.332	ENSACAG00000013307	-	56	64.917	Anolis_carolinensis
ENSG00000121390	PSPC1	100	98.853	ENSANAG00000000059	PSPC1	100	98.853	Aotus_nancymaae
ENSG00000121390	PSPC1	99	62.935	ENSACLG00000027220	pspc1	87	58.887	Astatotilapia_calliptera
ENSG00000121390	PSPC1	82	79.573	ENSAMXG00000036881	pspc1	80	73.103	Astyanax_mexicanus
ENSG00000121390	PSPC1	100	95.793	ENSBTAG00000003934	PSPC1	100	95.793	Bos_taurus
ENSG00000121390	PSPC1	100	98.853	ENSCJAG00000004554	PSPC1	100	98.853	Callithrix_jacchus
ENSG00000121390	PSPC1	100	98.853	ENSCAFG00020002009	PSPC1	100	98.853	Canis_lupus_dingo
ENSG00000121390	PSPC1	100	95.793	ENSCHIG00000016708	PSPC1	100	95.793	Capra_hircus
ENSG00000121390	PSPC1	80	88.389	ENSTSYG00000032882	PSPC1	93	85.748	Carlito_syrichta
ENSG00000121390	PSPC1	100	97.201	ENSCPOG00000000395	PSPC1	100	97.201	Cavia_porcellus
ENSG00000121390	PSPC1	100	98.853	ENSCCAG00000033498	PSPC1	100	98.853	Cebus_capucinus
ENSG00000121390	PSPC1	100	99.235	ENSCATG00000036434	PSPC1	100	99.235	Cercocebus_atys
ENSG00000121390	PSPC1	88	88.121	ENSCLAG00000005241	PSPC1	99	88.121	Chinchilla_lanigera
ENSG00000121390	PSPC1	100	95.161	ENSCHOG00000008913	PSPC1	100	91.396	Choloepus_hoffmanni
ENSG00000121390	PSPC1	99	86.882	ENSCPBG00000020859	PSPC1	89	94.218	Chrysemys_picta_bellii
ENSG00000121390	PSPC1	78	58.766	ENSCSAVG00000003533	-	53	61.786	Ciona_savignyi
ENSG00000121390	PSPC1	67	99.245	ENSCANG00000018948	PSPC1	88	99.245	Colobus_angolensis_palliatus
ENSG00000121390	PSPC1	100	97.132	ENSCGRG00001018368	Pspc1	100	97.132	Cricetulus_griseus_chok1gshd
ENSG00000121390	PSPC1	100	97.132	ENSCGRG00000011724	Pspc1	100	97.132	Cricetulus_griseus_crigri
ENSG00000121390	PSPC1	55	60.000	ENSCSEG00000008899	-	62	67.797	Cynoglossus_semilaevis
ENSG00000121390	PSPC1	81	78.616	ENSCVAG00000007679	-	78	68.483	Cyprinodon_variegatus
ENSG00000121390	PSPC1	98	71.948	ENSDARG00000006621	pspc1	100	67.391	Danio_rerio
ENSG00000121390	PSPC1	100	96.941	ENSDNOG00000011078	PSPC1	100	96.941	Dasypus_novemcinctus
ENSG00000121390	PSPC1	100	94.264	ENSDORG00000016050	Pspc1	100	94.264	Dipodomys_ordii
ENSG00000121390	PSPC1	55	100.000	ENSETEG00000000502	-	72	100.000	Echinops_telfairi
ENSG00000121390	PSPC1	82	73.313	ENSEBUG00000003964	-	62	72.254	Eptatretus_burgeri
ENSG00000121390	PSPC1	84	46.781	ENSEBUG00000010133	pspc1	72	51.273	Eptatretus_burgeri
ENSG00000121390	PSPC1	100	97.897	ENSEASG00005000119	PSPC1	100	97.897	Equus_asinus_asinus
ENSG00000121390	PSPC1	100	97.897	ENSECAG00000017286	PSPC1	100	97.897	Equus_caballus
ENSG00000121390	PSPC1	91	87.111	ENSEEUG00000011288	-	100	65.010	Erinaceus_europaeus
ENSG00000121390	PSPC1	99	71.859	ENSELUG00000003746	pspc1	79	80.838	Esox_lucius
ENSG00000121390	PSPC1	100	98.853	ENSFCAG00000027841	PSPC1	100	98.853	Felis_catus
ENSG00000121390	PSPC1	89	94.647	ENSFALG00000008750	PSPC1	99	87.954	Ficedula_albicollis
ENSG00000121390	PSPC1	100	94.646	ENSFDAG00000002617	PSPC1	100	94.646	Fukomys_damarensis
ENSG00000121390	PSPC1	75	81.183	ENSGMOG00000015074	pspc1	86	65.875	Gadus_morhua
ENSG00000121390	PSPC1	99	87.311	ENSGALG00000017142	PSPC1	89	94.647	Gallus_gallus
ENSG00000121390	PSPC1	82	78.154	ENSGAFG00000006327	pspc1	67	78.154	Gambusia_affinis
ENSG00000121390	PSPC1	84	73.414	ENSGACG00000014901	pspc1	93	73.433	Gasterosteus_aculeatus
ENSG00000121390	PSPC1	99	86.882	ENSGAGG00000019164	PSPC1	89	94.218	Gopherus_agassizii
ENSG00000121390	PSPC1	84	72.892	ENSGAGG00000017325	-	56	68.306	Gopherus_agassizii
ENSG00000121390	PSPC1	100	100.000	ENSGGOG00000003414	PSPC1	100	100.000	Gorilla_gorilla
ENSG00000121390	PSPC1	98	69.347	ENSHBUG00000001139	pspc1	87	69.742	Haplochromis_burtoni
ENSG00000121390	PSPC1	100	96.941	ENSHGLG00000018811	PSPC1	100	96.941	Heterocephalus_glaber_female
ENSG00000121390	PSPC1	100	89.113	ENSHGLG00100007962	PSPC1	100	92.286	Heterocephalus_glaber_male
ENSG00000121390	PSPC1	82	74.154	ENSHCOG00000013251	pspc1	83	70.321	Hippocampus_comes
ENSG00000121390	PSPC1	98	73.643	ENSIPUG00000013192	pspc1	88	73.673	Ictalurus_punctatus
ENSG00000121390	PSPC1	100	98.088	ENSSTOG00000026833	PSPC1	100	98.088	Ictidomys_tridecemlineatus
ENSG00000121390	PSPC1	100	97.514	ENSJJAG00000018334	Pspc1	100	97.514	Jaculus_jaculus
ENSG00000121390	PSPC1	88	55.724	ENSKMAG00000013525	-	84	53.978	Kryptolebias_marmoratus
ENSG00000121390	PSPC1	94	72.826	ENSLBEG00000004474	pspc1	71	76.855	Labrus_bergylta
ENSG00000121390	PSPC1	99	75.926	ENSLACG00000010762	PSPC1	88	85.129	Latimeria_chalumnae
ENSG00000121390	PSPC1	88	84.382	ENSLOCG00000010832	pspc1	91	84.382	Lepisosteus_oculatus
ENSG00000121390	PSPC1	100	97.132	ENSLAFG00000010968	PSPC1	100	97.132	Loxodonta_africana
ENSG00000121390	PSPC1	100	99.235	ENSMFAG00000032728	PSPC1	100	99.235	Macaca_fascicularis
ENSG00000121390	PSPC1	100	99.235	ENSMMUG00000020262	PSPC1	100	99.235	Macaca_mulatta
ENSG00000121390	PSPC1	100	99.235	ENSMNEG00000027401	PSPC1	100	99.235	Macaca_nemestrina
ENSG00000121390	PSPC1	100	99.749	ENSMLEG00000039043	PSPC1	100	99.749	Mandrillus_leucophaeus
ENSG00000121390	PSPC1	82	78.086	ENSMAMG00000004333	pspc1	77	71.628	Mastacembelus_armatus
ENSG00000121390	PSPC1	52	64.286	ENSMZEG00005028170	-	66	74.336	Maylandia_zebra
ENSG00000121390	PSPC1	99	62.935	ENSMZEG00005005726	pspc1	87	58.887	Maylandia_zebra
ENSG00000121390	PSPC1	77	93.596	ENSMGAG00000015134	PSPC1	100	93.596	Meleagris_gallopavo
ENSG00000121390	PSPC1	100	95.968	ENSMAUG00000021067	Pspc1	99	90.909	Mesocricetus_auratus
ENSG00000121390	PSPC1	100	98.470	ENSMICG00000013970	PSPC1	100	98.470	Microcebus_murinus
ENSG00000121390	PSPC1	100	97.323	ENSMOCG00000006060	Pspc1	100	97.323	Microtus_ochrogaster
ENSG00000121390	PSPC1	89	53.782	ENSMMOG00000004352	pspc1	58	52.923	Mola_mola
ENSG00000121390	PSPC1	100	96.371	ENSMODG00000008029	PSPC1	78	96.495	Monodelphis_domestica
ENSG00000121390	PSPC1	82	77.469	ENSMALG00000008914	pspc1	88	67.591	Monopterus_albus
ENSG00000121390	PSPC1	100	97.328	MGP_CAROLIEiJ_G0019341	Pspc1	100	97.328	Mus_caroli
ENSG00000121390	PSPC1	100	97.519	ENSMUSG00000021938	Pspc1	100	97.519	Mus_musculus
ENSG00000121390	PSPC1	100	97.328	MGP_PahariEiJ_G0030359	Pspc1	100	97.328	Mus_pahari
ENSG00000121390	PSPC1	100	97.328	MGP_SPRETEiJ_G0020232	Pspc1	100	97.328	Mus_spretus
ENSG00000121390	PSPC1	100	98.470	ENSMPUG00000013347	PSPC1	100	98.470	Mustela_putorius_furo
ENSG00000121390	PSPC1	100	96.578	ENSMLUG00000017663	PSPC1	100	96.578	Myotis_lucifugus
ENSG00000121390	PSPC1	100	97.323	ENSNGAG00000011271	Pspc1	100	97.323	Nannospalax_galili
ENSG00000121390	PSPC1	98	64.070	ENSNBRG00000014059	pspc1	92	61.675	Neolamprologus_brichardi
ENSG00000121390	PSPC1	100	99.426	ENSNLEG00000001294	PSPC1	100	99.426	Nomascus_leucogenys
ENSG00000121390	PSPC1	100	95.565	ENSMEUG00000000476	PSPC1	84	95.703	Notamacropus_eugenii
ENSG00000121390	PSPC1	100	86.042	ENSODEG00000007817	-	100	81.285	Octodon_degus
ENSG00000121390	PSPC1	100	90.726	ENSODEG00000019012	-	100	85.822	Octodon_degus
ENSG00000121390	PSPC1	98	69.598	ENSONIG00000012010	pspc1	87	68.856	Oreochromis_niloticus
ENSG00000121390	PSPC1	76	97.744	ENSOANG00000009017	-	100	97.744	Ornithorhynchus_anatinus
ENSG00000121390	PSPC1	99	66.532	ENSOANG00000011381	-	99	64.313	Ornithorhynchus_anatinus
ENSG00000121390	PSPC1	100	98.279	ENSOCUG00000006153	PSPC1	100	98.279	Oryctolagus_cuniculus
ENSG00000121390	PSPC1	82	79.012	ENSORLG00000004232	-	87	64.182	Oryzias_latipes
ENSG00000121390	PSPC1	82	78.395	ENSORLG00020000578	PSPC1	87	65.409	Oryzias_latipes_hni
ENSG00000121390	PSPC1	82	79.321	ENSORLG00015017480	pspc1	82	68.650	Oryzias_latipes_hsok
ENSG00000121390	PSPC1	53	82.857	ENSOMEG00000003779	pspc1	96	82.775	Oryzias_melastigma
ENSG00000121390	PSPC1	100	99.044	ENSOGAG00000012643	PSPC1	100	99.044	Otolemur_garnettii
ENSG00000121390	PSPC1	100	91.048	ENSOARG00000014163	PSPC1	100	91.048	Ovis_aries
ENSG00000121390	PSPC1	84	99.094	ENSPPAG00000009836	PSPC1	94	99.094	Pan_paniscus
ENSG00000121390	PSPC1	100	98.853	ENSPPRG00000008833	PSPC1	100	98.853	Panthera_pardus
ENSG00000121390	PSPC1	100	83.556	ENSPTIG00000016917	PSPC1	100	83.556	Panthera_tigris_altaica
ENSG00000121390	PSPC1	100	100.000	ENSPTRG00000005677	PSPC1	100	100.000	Pan_troglodytes
ENSG00000121390	PSPC1	100	99.426	ENSPANG00000001992	PSPC1	100	99.426	Papio_anubis
ENSG00000121390	PSPC1	83	83.841	ENSPKIG00000003578	pspc1	81	77.880	Paramormyrops_kingsleyae
ENSG00000121390	PSPC1	99	86.842	ENSPSIG00000005168	PSPC1	99	86.441	Pelodiscus_sinensis
ENSG00000121390	PSPC1	78	70.476	ENSPMGG00000015135	pspc1	80	73.611	Periophthalmus_magnuspinnatus
ENSG00000121390	PSPC1	100	97.706	ENSPEMG00000015214	Pspc1	100	97.706	Peromyscus_maniculatus_bairdii
ENSG00000121390	PSPC1	81	43.333	ENSPMAG00000004618	pspc1	79	47.692	Petromyzon_marinus
ENSG00000121390	PSPC1	99	96.935	ENSPCIG00000017680	PSPC1	100	96.935	Phascolarctos_cinereus
ENSG00000121390	PSPC1	92	71.925	ENSPFOG00000003362	pspc1	88	68.076	Poecilia_formosa
ENSG00000121390	PSPC1	97	69.018	ENSPLAG00000011540	pspc1	87	68.076	Poecilia_latipinna
ENSG00000121390	PSPC1	81	68.159	ENSPLAG00000004407	-	52	60.647	Poecilia_latipinna
ENSG00000121390	PSPC1	97	68.514	ENSPMEG00000008322	pspc1	87	67.653	Poecilia_mexicana
ENSG00000121390	PSPC1	79	69.388	ENSPMEG00000001025	-	51	60.647	Poecilia_mexicana
ENSG00000121390	PSPC1	92	71.123	ENSPREG00000007786	pspc1	87	67.653	Poecilia_reticulata
ENSG00000121390	PSPC1	100	99.235	ENSPPYG00000005186	PSPC1	100	99.235	Pongo_abelii
ENSG00000121390	PSPC1	73	100.000	ENSPCAG00000008314	-	66	100.000	Procavia_capensis
ENSG00000121390	PSPC1	100	98.387	ENSPCOG00000014364	PSPC1	100	94.455	Propithecus_coquereli
ENSG00000121390	PSPC1	98	97.150	ENSPVAG00000005036	PSPC1	100	94.455	Pteropus_vampyrus
ENSG00000121390	PSPC1	99	62.935	ENSPNYG00000008893	pspc1	87	58.887	Pundamilia_nyererei
ENSG00000121390	PSPC1	98	72.237	ENSPNAG00000016511	pspc1	89	72.611	Pygocentrus_nattereri
ENSG00000121390	PSPC1	100	97.514	ENSRNOG00000020782	Pspc1	100	97.514	Rattus_norvegicus
ENSG00000121390	PSPC1	93	99.589	ENSRBIG00000036057	PSPC1	100	99.589	Rhinopithecus_bieti
ENSG00000121390	PSPC1	100	99.426	ENSRROG00000036334	PSPC1	100	99.426	Rhinopithecus_roxellana
ENSG00000121390	PSPC1	79	89.104	ENSSBOG00000028172	PSPC1	89	97.417	Saimiri_boliviensis_boliviensis
ENSG00000121390	PSPC1	100	96.371	ENSSHAG00000004696	PSPC1	100	91.619	Sarcophilus_harrisii
ENSG00000121390	PSPC1	83	85.583	ENSSFOG00015001395	pspc1	90	78.372	Scleropages_formosus
ENSG00000121390	PSPC1	87	75.072	ENSSMAG00000001761	pspc1	82	76.970	Scophthalmus_maximus
ENSG00000121390	PSPC1	82	81.173	ENSSDUG00000010651	pspc1	76	74.186	Seriola_dumerili
ENSG00000121390	PSPC1	82	74.303	ENSSLDG00000004284	pspc1	81	62.037	Seriola_lalandi_dorsalis
ENSG00000121390	PSPC1	100	91.532	ENSSARG00000000888	PSPC1	100	89.101	Sorex_araneus
ENSG00000121390	PSPC1	77	75.263	ENSSPUG00000001136	-	53	61.453	Sphenodon_punctatus
ENSG00000121390	PSPC1	98	80.237	ENSSPUG00000008550	PSPC1	89	81.064	Sphenodon_punctatus
ENSG00000121390	PSPC1	82	80.864	ENSSPAG00000001921	pspc1	77	72.791	Stegastes_partitus
ENSG00000121390	PSPC1	100	96.947	ENSSSCG00000009569	PSPC1	100	96.947	Sus_scrofa
ENSG00000121390	PSPC1	89	94.647	ENSTGUG00000011295	PSPC1	100	94.647	Taeniopygia_guttata
ENSG00000121390	PSPC1	92	65.668	ENSTRUG00000011335	pspc1	77	65.937	Takifugu_rubripes
ENSG00000121390	PSPC1	82	73.148	ENSTNIG00000010358	pspc1	84	66.508	Tetraodon_nigroviridis
ENSG00000121390	PSPC1	98	87.306	ENSTBEG00000002361	PSPC1	100	75.908	Tupaia_belangeri
ENSG00000121390	PSPC1	100	96.750	ENSTTRG00000003343	PSPC1	100	96.750	Tursiops_truncatus
ENSG00000121390	PSPC1	100	97.984	ENSUAMG00000012309	PSPC1	100	98.575	Ursus_americanus
ENSG00000121390	PSPC1	93	98.973	ENSUMAG00000013993	PSPC1	100	98.973	Ursus_maritimus
ENSG00000121390	PSPC1	76	99.499	ENSVPAG00000010029	PSPC1	100	99.499	Vicugna_pacos
ENSG00000121390	PSPC1	100	98.853	ENSVVUG00000006414	PSPC1	100	98.964	Vulpes_vulpes
ENSG00000121390	PSPC1	92	71.429	ENSXCOG00000017438	pspc1	77	76.994	Xiphophorus_couchianus
ENSG00000121390	PSPC1	92	71.698	ENSXMAG00000007929	pspc1	77	77.301	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000976	transcription regulatory region sequence-specific DNA binding	21873635.	IBA	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISA	Function
GO:0001650	fibrillar center	-	IDA	Component
GO:0002218	activation of innate immune response	28712728.	IDA	Process
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0005515	protein binding	16148043.16169070.25416956.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0016363	nuclear matrix	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0042382	paraspeckles	-	IEA	Component
GO:0042752	regulation of circadian rhythm	-	ISS	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0045892	negative regulation of transcription, DNA-templated	-	ISS	Process
GO:0048511	rhythmic process	-	IEA	Process
GO:0070888	E-box binding	-	ISS	Function