EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000122068 (Gene tree)
Gene ID
84248
Gene Symbol
FYTTD1
Alias
DKFZp761B1514|UIF
Full Name
forty-two-three domain containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
50,418 bases
Position
chr3:197,737,179-197,787,596
Accession
25407
RBP type
canonical RBP
Summary
(Forty-Two-Three Domain Containing 1) is a Protein Coding gene. Among its related pathways are Transport of Mature Transcript to Cytoplasm and RNA Polymerase II Transcription Termination. Gene Ontology (GO) annotations related to this gene include mRNA binding.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000241502FYTTPF07078.111e-16211
ENSP00000393746FYTTPF07078.112.4e-15011
ENSP00000394631FYTTPF07078.118.7e-13511
ENSP00000399896FYTTPF07078.111e-8611
ENSP00000389557FYTTPF07078.112.1e-2911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000418169FYTTD1-204593-ENSP00000400191129 (aa)-Q96QD9
ENST00000492360FYTTD1-208533--- (aa)--
ENST00000415708FYTTD1-2031342-ENSP00000393746292 (aa)-Q96QD9
ENST00000424384FYTTD1-2051758-ENSP00000394631251 (aa)-Q96QD9
ENST00000412924FYTTD1-202998-ENSP00000409257121 (aa)-H9KVD1
ENST00000241502FYTTD1-2016866-ENSP00000241502318 (aa)-Q96QD9
ENST00000426031FYTTD1-206491-ENSP0000038955771 (aa)-H9KVC1
ENST00000494309FYTTD1-209719-ENSP00000417742126 (aa)-H9KVD5
ENST00000428738FYTTD1-207718-ENSP00000399896176 (aa)-H9KVC6
Gene Model
Click here to download ENSG00000122068's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000122068's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000122068FYTTD19741.196ENSAPOG00000015571-9542.532Acanthochromis_polyacanthus
ENSG00000122068FYTTD110095.219ENSAMEG00000004083FYTTD110093.125Ailuropoda_melanoleuca
ENSG00000122068FYTTD19740.584ENSACIG00000001559-9441.905Amphilophus_citrinellus
ENSG00000122068FYTTD19742.763ENSAOCG00000018069-9643.949Amphiprion_ocellaris
ENSG00000122068FYTTD19742.763ENSAPEG00000003725-9643.949Amphiprion_percula
ENSG00000122068FYTTD19742.763ENSATEG00000020932-9544.051Anabas_testudineus
ENSG00000122068FYTTD19969.355ENSAPLG00000015624FYTTD110062.696Anas_platyrhynchos
ENSG00000122068FYTTD19965.863ENSACAG00000002796FYTTD110061.635Anolis_carolinensis
ENSG00000122068FYTTD110098.592ENSANAG00000024581FYTTD110097.484Aotus_nancymaae
ENSG00000122068FYTTD19345.306ENSACLG00000011379-9543.312Astatotilapia_calliptera
ENSG00000122068FYTTD19840.780ENSAMXG00000043436-9740.181Astyanax_mexicanus
ENSG00000122068FYTTD110093.625ENSBTAG00000014874FYTTD110092.476Bos_taurus
ENSG00000122068FYTTD110098.592ENSCJAG00000016488FYTTD18197.484Callithrix_jacchus
ENSG00000122068FYTTD110095.219ENSCAFG00000029695-10094.366Canis_familiaris
ENSG00000122068FYTTD110095.219ENSCAFG00000016270FYTTD110094.044Canis_familiaris
ENSG00000122068FYTTD110095.219ENSCAFG00020003266FYTTD110094.044Canis_lupus_dingo
ENSG00000122068FYTTD110091.633ENSCHIG00000015524-10090.566Capra_hircus
ENSG00000122068FYTTD110094.024ENSCHIG00000021253-10092.790Capra_hircus
ENSG00000122068FYTTD110094.821ENSTSYG00000013767FYTTD110093.711Carlito_syrichta
ENSG00000122068FYTTD110091.549ENSCPOG00000011463FYTTD110083.478Cavia_porcellus
ENSG00000122068FYTTD110098.592ENSCCAG00000029719FYTTD110097.799Cebus_capucinus
ENSG00000122068FYTTD1100100.000ENSCATG00000037016FYTTD110098.113Cercocebus_atys
ENSG00000122068FYTTD19873.397ENSCLAG00000001980-10073.397Chinchilla_lanigera
ENSG00000122068FYTTD110092.430ENSCLAG00000012210-9498.347Chinchilla_lanigera
ENSG00000122068FYTTD110098.592ENSCSAG00000008466FYTTD110097.484Chlorocebus_sabaeus
ENSG00000122068FYTTD110088.732ENSCHOG00000002881FYTTD110074.214Choloepus_hoffmanni
ENSG00000122068FYTTD19970.683ENSCPBG00000017348FYTTD19868.471Chrysemys_picta_bellii
ENSG00000122068FYTTD19231.405ENSCPBG00000016753-9231.818Chrysemys_picta_bellii
ENSG00000122068FYTTD110098.592ENSCANG00000034075-10091.824Colobus_angolensis_palliatus
ENSG00000122068FYTTD110098.592ENSCANG00000021075-10096.503Colobus_angolensis_palliatus
ENSG00000122068FYTTD110093.625ENSCGRG00001023957-10093.396Cricetulus_griseus_chok1gshd
ENSG00000122068FYTTD110093.625ENSCGRG00000014096-9493.310Cricetulus_griseus_crigri
ENSG00000122068FYTTD19549.004ENSCSEG00000011478-9547.302Cynoglossus_semilaevis
ENSG00000122068FYTTD19241.736ENSCVAG00000008388-9240.594Cyprinodon_variegatus
ENSG00000122068FYTTD110093.227ENSDNOG00000040247FYTTD110091.824Dasypus_novemcinctus
ENSG00000122068FYTTD110089.641ENSDORG00000011686Fyttd110089.623Dipodomys_ordii
ENSG00000122068FYTTD110092.032ENSETEG00000000700FYTTD110091.195Echinops_telfairi
ENSG00000122068FYTTD110093.396ENSEASG00005006793FYTTD110093.396Equus_asinus_asinus
ENSG00000122068FYTTD110093.711ENSECAG00000019051FYTTD110093.711Equus_caballus
ENSG00000122068FYTTD19590.795ENSEEUG00000001433-10090.795Erinaceus_europaeus
ENSG00000122068FYTTD19588.285ENSEEUG00000002650-10088.285Erinaceus_europaeus
ENSG00000122068FYTTD19939.731ENSELUG00000024402-9740.828Esox_lucius
ENSG00000122068FYTTD110094.024ENSFCAG00000009992FYTTD110092.835Felis_catus
ENSG00000122068FYTTD19969.355ENSFALG00000007503FYTTD19066.667Ficedula_albicollis
ENSG00000122068FYTTD19788.477ENSFDAG00000005650-9784.591Fukomys_damarensis
ENSG00000122068FYTTD110094.024ENSFDAG00000010594-10093.640Fukomys_damarensis
ENSG00000122068FYTTD19741.528ENSFHEG00000016387-9542.765Fundulus_heteroclitus
ENSG00000122068FYTTD19738.614ENSGMOG00000002130-9540.000Gadus_morhua
ENSG00000122068FYTTD19966.935ENSGALG00000007581FYTTD110061.755Gallus_gallus
ENSG00000122068FYTTD19737.461ENSGAFG00000008375-9538.739Gambusia_affinis
ENSG00000122068FYTTD19741.447ENSGACG00000016088-9242.765Gasterosteus_aculeatus
ENSG00000122068FYTTD19969.478ENSGAGG00000011127FYTTD19067.516Gopherus_agassizii
ENSG00000122068FYTTD19530.488ENSGAGG00000022107-9430.844Gopherus_agassizii
ENSG00000122068FYTTD110099.602ENSGGOG00000011665FYTTD110099.371Gorilla_gorilla
ENSG00000122068FYTTD19345.306ENSHBUG00000017614-9543.312Haplochromis_burtoni
ENSG00000122068FYTTD110094.024ENSHGLG00000019355-10093.711Heterocephalus_glaber_female
ENSG00000122068FYTTD110089.205ENSHGLG00000017583-10085.859Heterocephalus_glaber_female
ENSG00000122068FYTTD110072.327ENSHGLG00000015565-10072.327Heterocephalus_glaber_female
ENSG00000122068FYTTD19675.417ENSHGLG00000006924-9476.512Heterocephalus_glaber_female
ENSG00000122068FYTTD19566.547ENSHGLG00100004604-9467.260Heterocephalus_glaber_male
ENSG00000122068FYTTD110072.642ENSHGLG00100004761-10072.642Heterocephalus_glaber_male
ENSG00000122068FYTTD110094.024ENSHGLG00100017162-10093.286Heterocephalus_glaber_male
ENSG00000122068FYTTD110081.818ENSHGLG00100014883-10080.503Heterocephalus_glaber_male
ENSG00000122068FYTTD19739.394ENSHCOG00000021011-9641.118Hippocampus_comes
ENSG00000122068FYTTD19440.357ENSIPUG00000012096-9638.576Ictalurus_punctatus
ENSG00000122068FYTTD110095.219ENSSTOG00000028291FYTTD110094.025Ictidomys_tridecemlineatus
ENSG00000122068FYTTD110092.430ENSJJAG00000016455Fyttd19495.868Jaculus_jaculus
ENSG00000122068FYTTD19740.968ENSKMAG00000004518-9542.271Kryptolebias_marmoratus
ENSG00000122068FYTTD19845.349ENSLBEG00000009232-9544.551Labrus_bergylta
ENSG00000122068FYTTD19857.308ENSLACG00000006864FYTTD110053.529Latimeria_chalumnae
ENSG00000122068FYTTD19731.864ENSLACG00000005906-9434.106Latimeria_chalumnae
ENSG00000122068FYTTD19744.828ENSLOCG00000008490FYTTD19646.061Lepisosteus_oculatus
ENSG00000122068FYTTD110094.422ENSLAFG00000017209FYTTD110094.025Loxodonta_africana
ENSG00000122068FYTTD1100100.000ENSMFAG00000033352FYTTD19895.238Macaca_fascicularis
ENSG00000122068FYTTD1100100.000ENSMMUG00000048439FYTTD110097.260Macaca_mulatta
ENSG00000122068FYTTD1100100.000ENSMNEG00000038497FYTTD110097.799Macaca_nemestrina
ENSG00000122068FYTTD1100100.000ENSMLEG00000033370FYTTD110097.552Mandrillus_leucophaeus
ENSG00000122068FYTTD19841.234ENSMAMG00000002358-9641.853Mastacembelus_armatus
ENSG00000122068FYTTD19345.306ENSMZEG00005007182-9642.345Maylandia_zebra
ENSG00000122068FYTTD19968.675ENSMGAG00000007933FYTTD110066.783Meleagris_gallopavo
ENSG00000122068FYTTD110088.732ENSMAUG00000010679Fyttd110081.191Mesocricetus_auratus
ENSG00000122068FYTTD110095.618ENSMICG00000049152FYTTD110094.969Microcebus_murinus
ENSG00000122068FYTTD110093.625ENSMOCG00000015509Fyttd110092.453Microtus_ochrogaster
ENSG00000122068FYTTD19342.460ENSMMOG00000018430-9540.798Mola_mola
ENSG00000122068FYTTD110072.222ENSMODG00000018393FYTTD18368.598Monodelphis_domestica
ENSG00000122068FYTTD19840.777ENSMALG00000005624-9742.188Monopterus_albus
ENSG00000122068FYTTD110091.633MGP_CAROLIEiJ_G0020682Fyttd110091.509Mus_caroli
ENSG00000122068FYTTD110092.453ENSMUSG00000022800Fyttd110092.462Mus_musculus
ENSG00000122068FYTTD110092.430MGP_PahariEiJ_G0016385Fyttd110092.138Mus_pahari
ENSG00000122068FYTTD110091.824MGP_SPRETEiJ_G0021578Fyttd110091.824Mus_spretus
ENSG00000122068FYTTD110094.024ENSMPUG00000004085FYTTD110093.103Mustela_putorius_furo
ENSG00000122068FYTTD110093.625ENSMLUG00000005630FYTTD110092.790Myotis_lucifugus
ENSG00000122068FYTTD110093.625ENSNGAG00000020280Fyttd110092.453Nannospalax_galili
ENSG00000122068FYTTD19345.714ENSNBRG00000005032-9543.492Neolamprologus_brichardi
ENSG00000122068FYTTD1100100.000ENSNLEG00000015547FYTTD110099.293Nomascus_leucogenys
ENSG00000122068FYTTD19366.871ENSMEUG00000001523-10049.371Notamacropus_eugenii
ENSG00000122068FYTTD110091.633ENSOPRG00000008211FYTTD110091.873Ochotona_princeps
ENSG00000122068FYTTD110086.932ENSODEG00000013104-9282.101Octodon_degus
ENSG00000122068FYTTD110092.829ENSODEG00000012844-9497.521Octodon_degus
ENSG00000122068FYTTD19742.333ENSONIG00000010717-10044.079Oreochromis_niloticus
ENSG00000122068FYTTD19965.726ENSOANG00000014284FYTTD110065.263Ornithorhynchus_anatinus
ENSG00000122068FYTTD110094.024ENSOCUG00000012770FYTTD110093.082Oryctolagus_cuniculus
ENSG00000122068FYTTD19346.531ENSORLG00000009073-9543.131Oryzias_latipes
ENSG00000122068FYTTD19346.939ENSORLG00020012343-9143.450Oryzias_latipes_hni
ENSG00000122068FYTTD19347.347ENSORLG00015008022-9143.770Oryzias_latipes_hsok
ENSG00000122068FYTTD19345.868ENSOMEG00000006553-9545.110Oryzias_melastigma
ENSG00000122068FYTTD19990.698ENSOGAG00000011888FYTTD110084.568Otolemur_garnettii
ENSG00000122068FYTTD19989.147ENSOARG00000002583-9776.549Ovis_aries
ENSG00000122068FYTTD110094.024ENSOARG00000020275-9493.750Ovis_aries
ENSG00000122068FYTTD1100100.000ENSPPAG00000027558FYTTD1100100.000Pan_paniscus
ENSG00000122068FYTTD110094.024ENSPPRG00000009562FYTTD110093.728Panthera_pardus
ENSG00000122068FYTTD110094.024ENSPTIG00000006326FYTTD110092.835Panthera_tigris_altaica
ENSG00000122068FYTTD1100100.000ENSPTRG00000015796FYTTD1100100.000Pan_troglodytes
ENSG00000122068FYTTD1100100.000ENSPANG00000030359FYTTD110097.902Papio_anubis
ENSG00000122068FYTTD19747.471ENSPKIG00000022465-8347.436Paramormyrops_kingsleyae
ENSG00000122068FYTTD19966.800ENSPSIG00000002293FYTTD110063.986Pelodiscus_sinensis
ENSG00000122068FYTTD19734.323ENSPMGG00000009334-8659.048Periophthalmus_magnuspinnatus
ENSG00000122068FYTTD110092.829ENSPEMG00000011670Fyttd110092.453Peromyscus_maniculatus_bairdii
ENSG00000122068FYTTD110075.794ENSPCIG00000018720FYTTD110073.981Phascolarctos_cinereus
ENSG00000122068FYTTD16453.333ENSPFOG00000022975-7953.333Poecilia_formosa
ENSG00000122068FYTTD19742.949ENSPLAG00000009293-9545.141Poecilia_latipinna
ENSG00000122068FYTTD19743.366ENSPMEG00000015488-9544.795Poecilia_mexicana
ENSG00000122068FYTTD19742.857ENSPREG00000006038-9544.304Poecilia_reticulata
ENSG00000122068FYTTD110099.371ENSPPYG00000014456FYTTD110099.371Pongo_abelii
ENSG00000122068FYTTD110094.025ENSPCAG00000003873FYTTD110094.025Procavia_capensis
ENSG00000122068FYTTD110095.618ENSPCOG00000024162FYTTD110094.969Propithecus_coquereli
ENSG00000122068FYTTD110092.138ENSPVAG00000016445FYTTD110092.138Pteropus_vampyrus
ENSG00000122068FYTTD19345.306ENSPNYG00000002296-9543.312Pundamilia_nyererei
ENSG00000122068FYTTD19843.525ENSPNAG00000016146-9642.202Pygocentrus_nattereri
ENSG00000122068FYTTD110091.235ENSRNOG00000034233Fyttd110090.175Rattus_norvegicus
ENSG00000122068FYTTD110096.023ENSRBIG00000038260-10093.061Rhinopithecus_bieti
ENSG00000122068FYTTD1100100.000ENSRBIG00000018859-10097.887Rhinopithecus_bieti
ENSG00000122068FYTTD1100100.000ENSRROG00000014194FYTTD110098.113Rhinopithecus_roxellana
ENSG00000122068FYTTD110096.414ENSSBOG00000035412FYTTD19995.804Saimiri_boliviensis_boliviensis
ENSG00000122068FYTTD110075.794ENSSHAG00000005704FYTTD110075.261Sarcophilus_harrisii
ENSG00000122068FYTTD19545.802ENSSFOG00015014729-9345.201Scleropages_formosus
ENSG00000122068FYTTD19944.727ENSSMAG00000008798-9740.923Scophthalmus_maximus
ENSG00000122068FYTTD19843.182ENSSDUG00000009615-9545.016Seriola_dumerili
ENSG00000122068FYTTD19347.755ENSSLDG00000021326-9545.016Seriola_lalandi_dorsalis
ENSG00000122068FYTTD19589.540ENSSARG00000009996FYTTD110074.843Sorex_araneus
ENSG00000122068FYTTD19970.281ENSSPUG00000012549FYTTD110067.085Sphenodon_punctatus
ENSG00000122068FYTTD19641.216ENSSPAG00000002856-9042.574Stegastes_partitus
ENSG00000122068FYTTD110095.219ENSSSCG00000027139FYTTD110094.025Sus_scrofa
ENSG00000122068FYTTD19966.935ENSTGUG00000009645FYTTD110065.424Taeniopygia_guttata
ENSG00000122068FYTTD19943.657ENSTRUG00000008895-8241.867Takifugu_rubripes
ENSG00000122068FYTTD19846.565ENSTNIG00000007811-9445.307Tetraodon_nigroviridis
ENSG00000122068FYTTD110078.616ENSTBEG00000005595FYTTD110078.616Tupaia_belangeri
ENSG00000122068FYTTD110094.821ENSTTRG00000016288FYTTD110094.040Tursiops_truncatus
ENSG00000122068FYTTD110094.821ENSUMAG00000003373FYTTD110093.417Ursus_maritimus
ENSG00000122068FYTTD17595.187ENSVPAG00000003854FYTTD18395.187Vicugna_pacos
ENSG00000122068FYTTD110095.618ENSVVUG00000008003FYTTD19894.718Vulpes_vulpes
ENSG00000122068FYTTD19951.210ENSXETG00000024516fyttd19950.000Xenopus_tropicalis
ENSG00000122068FYTTD19742.675ENSXCOG00000007479-9544.099Xiphophorus_couchianus
ENSG00000122068FYTTD19742.484ENSXMAG00000004764-9543.949Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22681889.HDAFunction
GO:0003729mRNA binding21873635.IBAFunction
GO:0003729mRNA binding19836239.IDAFunction
GO:0005515protein binding19836239.IPIFunction
GO:0005654nucleoplasm19836239.IDAComponent
GO:0006406mRNA export from nucleus21873635.IBAProcess
GO:0006406mRNA export from nucleus19836239.IMPProcess
GO:0016607nuclear speck21873635.IBAComponent
GO:0016607nuclear speck19836239.IDAComponent

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