EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000123737 (Gene tree)
Gene ID
5393
Gene Symbol
EXOSC9
Alias
PM/Scl-75|Rrp45p|RRP45|p5|p6|PMSCL1
Full Name
exosome component 9
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
15,727 bases
Position
chr4:121,801,295-121,817,021
Accession
9137
RBP type
canonical RBP
Summary
This gene encodes a component of the human exosome, a exoribonuclease complex which processes and degrades RNA in the nucleus and cytoplasm. This component may play a role in mRNA degradation and the polymyositis/scleroderma autoantigen complex. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2011]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000425782RNase_PHPF01138.212.5e-2111
ENSP00000243498RNase_PHPF01138.212.7e-2111
ENSP00000368984RNase_PHPF01138.213e-2111
ENSP00000422205RNase_PHPF01138.211.9e-0911
ENSP00000424504RNase_PH_CPF03725.151.6e-1211
ENSP00000422205RNase_PH_CPF03725.153.3e-1211
ENSP00000425782RNase_PH_CPF03725.155.6e-1211
ENSP00000243498RNase_PH_CPF03725.156e-1211
ENSP00000368984RNase_PH_CPF03725.156.7e-1211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
26546114Ptbp1 and Exosc9 knockdowns trigger skin stability defects through different pathways.Dev Biol2016 Jan 15Noiret Mdoi: 10.1016/j.ydbio.2015.11.002
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000511132EXOSC9-209515-ENSP00000424504172 (aa)-H0Y9L5
ENST00000513654EXOSC9-2123882-ENSP00000423476242 (aa)-D6RA17
ENST00000243498EXOSC9-2011481XM_011532035ENSP00000243498439 (aa)XP_011530337Q06265
ENST00000511454EXOSC9-210733-ENSP0000042184586 (aa)-D6RAP4
ENST00000509980EXOSC9-2081317--- (aa)--
ENST00000503139EXOSC9-2031204--- (aa)--
ENST00000512454EXOSC9-2111543-ENSP00000425782423 (aa)-D6RIY6
ENST00000506201EXOSC9-205590--- (aa)--
ENST00000509800EXOSC9-207757-ENSP00000422205226 (aa)-D6R905
ENST00000379663EXOSC9-2021529-ENSP00000368984456 (aa)-Q06265
ENST00000508212EXOSC9-206612--- (aa)--
ENST00000503236EXOSC9-204644--- (aa)--
Gene Model
Click here to download ENSG00000123737's gene model file
Pathways
Pathway IDPathway NameSource
hsa03018RNA degradationKEGG
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000123737rs339640274121808259CMean corpuscular hemoglobin27863252[0.024-0.038] unit increase0.03129383EFO_0004527
ENSG00000123737rs339640274121808259CMean corpuscular volume27863252[0.027-0.041] unit increase0.03376425EFO_0004526
ENSG00000123737rs50043554121811061?Red blood cell count30595370EFO_0004305
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000123737's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000123737EXOSC99530.603ENSG00000120699EXOSC88230.603
ENSG00000123737EXOSC99630.833ENSG00000075914EXOSC78230.833
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000123737EXOSC99981.328ENSAPOG00000001202exosc99866.197Acanthochromis_polyacanthus
ENSG00000123737EXOSC99998.340ENSAMEG00000006133EXOSC910095.909Ailuropoda_melanoleuca
ENSG00000123737EXOSC99981.328ENSACIG00000013514exosc99571.585Amphilophus_citrinellus
ENSG00000123737EXOSC95631.298ENSAOCG00000015133exosc79030.522Amphiprion_ocellaris
ENSG00000123737EXOSC99980.913ENSAOCG00000023602exosc99966.824Amphiprion_ocellaris
ENSG00000123737EXOSC99980.913ENSAPEG00000014416exosc99966.824Amphiprion_percula
ENSG00000123737EXOSC99981.328ENSATEG00000023032exosc910066.019Anabas_testudineus
ENSG00000123737EXOSC97893.617ENSAPLG00000004920EXOSC99580.541Anas_platyrhynchos
ENSG00000123737EXOSC99430.303ENSAPLG00000007895EXOSC88330.000Anas_platyrhynchos
ENSG00000123737EXOSC98733.333ENSACAG00000004075-8330.935Anolis_carolinensis
ENSG00000123737EXOSC99990.041ENSACAG00000012689EXOSC99680.189Anolis_carolinensis
ENSG00000123737EXOSC99530.172ENSANAG00000028910EXOSC88230.172Aotus_nancymaae
ENSG00000123737EXOSC99998.340ENSANAG00000024817EXOSC910096.818Aotus_nancymaae
ENSG00000123737EXOSC99631.250ENSANAG00000028607EXOSC78231.250Aotus_nancymaae
ENSG00000123737EXOSC99982.573ENSACLG00000011471exosc99771.579Astatotilapia_calliptera
ENSG00000123737EXOSC99931.048ENSACLG00000007428exosc79930.272Astatotilapia_calliptera
ENSG00000123737EXOSC99981.328ENSAMXG00000031976exosc99673.901Astyanax_mexicanus
ENSG00000123737EXOSC97133.714ENSAMXG00000035439exosc76033.714Astyanax_mexicanus
ENSG00000123737EXOSC98632.468ENSBTAG00000018329EXOSC77630.493Bos_taurus
ENSG00000123737EXOSC99531.466ENSBTAG00000011855EXOSC89230.620Bos_taurus
ENSG00000123737EXOSC99997.510ENSBTAG00000004942EXOSC910095.227Bos_taurus
ENSG00000123737EXOSC99838.819WBGene00018154exos-97135.714Caenorhabditis_elegans
ENSG00000123737EXOSC97030.337WBGene00009289exos-75630.337Caenorhabditis_elegans
ENSG00000123737EXOSC99631.667ENSCJAG00000001928EXOSC78231.667Callithrix_jacchus
ENSG00000123737EXOSC99530.603ENSCJAG00000018078EXOSC88230.603Callithrix_jacchus
ENSG00000123737EXOSC99997.925ENSCJAG00000003038EXOSC910096.818Callithrix_jacchus
ENSG00000123737EXOSC99630.833ENSCAFG00000014055EXOSC78230.833Canis_familiaris
ENSG00000123737EXOSC99998.340ENSCAFG00000004139EXOSC910095.909Canis_familiaris
ENSG00000123737EXOSC99630.833ENSCAFG00020013315EXOSC78230.833Canis_lupus_dingo
ENSG00000123737EXOSC99998.340ENSCAFG00020017711EXOSC910095.909Canis_lupus_dingo
ENSG00000123737EXOSC99531.466ENSCHIG00000008153EXOSC89130.620Capra_hircus
ENSG00000123737EXOSC99997.510ENSCHIG00000018091EXOSC910095.227Capra_hircus
ENSG00000123737EXOSC99830.204ENSCHIG00000012995EXOSC78430.204Capra_hircus
ENSG00000123737EXOSC99997.510ENSTSYG00000002664EXOSC910096.364Carlito_syrichta
ENSG00000123737EXOSC99631.667ENSTSYG00000012043EXOSC78231.667Carlito_syrichta
ENSG00000123737EXOSC98881.720ENSCAPG00000007596EXOSC99581.347Cavia_aperea
ENSG00000123737EXOSC99230.131ENSCAPG00000016467EXOSC77830.131Cavia_aperea
ENSG00000123737EXOSC99996.680ENSCPOG00000034344EXOSC910094.533Cavia_porcellus
ENSG00000123737EXOSC99530.172ENSCCAG00000023491EXOSC88230.172Cebus_capucinus
ENSG00000123737EXOSC98632.468ENSCCAG00000028936EXOSC77630.045Cebus_capucinus
ENSG00000123737EXOSC910086.136ENSCCAG00000030677EXOSC910087.955Cebus_capucinus
ENSG00000123737EXOSC910099.317ENSCATG00000044273EXOSC910099.317Cercocebus_atys
ENSG00000123737EXOSC99530.172ENSCATG00000040502EXOSC88230.172Cercocebus_atys
ENSG00000123737EXOSC99630.417ENSCATG00000036675EXOSC78230.417Cercocebus_atys
ENSG00000123737EXOSC99997.095ENSCLAG00000004644EXOSC99794.601Chinchilla_lanigera
ENSG00000123737EXOSC99631.667ENSCLAG00000015083EXOSC78231.667Chinchilla_lanigera
ENSG00000123737EXOSC99530.172ENSCSAG00000017867EXOSC88230.172Chlorocebus_sabaeus
ENSG00000123737EXOSC910098.861ENSCSAG00000003705EXOSC910098.861Chlorocebus_sabaeus
ENSG00000123737EXOSC99630.417ENSCSAG00000016390EXOSC78230.417Chlorocebus_sabaeus
ENSG00000123737EXOSC98796.000ENSCHOG00000000779EXOSC910073.834Choloepus_hoffmanni
ENSG00000123737EXOSC99993.776ENSCPBG00000024725EXOSC99782.944Chrysemys_picta_bellii
ENSG00000123737EXOSC99850.000ENSCSAVG00000002868-9141.873Ciona_savignyi
ENSG00000123737EXOSC99630.000ENSCANG00000041919EXOSC78230.000Colobus_angolensis_palliatus
ENSG00000123737EXOSC99530.172ENSCANG00000040247EXOSC88230.172Colobus_angolensis_palliatus
ENSG00000123737EXOSC910098.405ENSCANG00000037429EXOSC910098.405Colobus_angolensis_palliatus
ENSG00000123737EXOSC99997.925ENSCGRG00001023030Exosc910092.938Cricetulus_griseus_chok1gshd
ENSG00000123737EXOSC99530.172ENSCGRG00001012262Exosc88230.172Cricetulus_griseus_chok1gshd
ENSG00000123737EXOSC99632.083ENSCGRG00001000938Exosc78232.083Cricetulus_griseus_chok1gshd
ENSG00000123737EXOSC98833.032ENSCGRG00000006887Exosc78133.032Cricetulus_griseus_crigri
ENSG00000123737EXOSC99530.172ENSCGRG00000003184Exosc88430.172Cricetulus_griseus_crigri
ENSG00000123737EXOSC99997.925ENSCGRG00000003785Exosc910092.938Cricetulus_griseus_crigri
ENSG00000123737EXOSC99980.913ENSCSEG00000014567exosc99968.889Cynoglossus_semilaevis
ENSG00000123737EXOSC99630.579ENSCVAG00000000739exosc78130.579Cyprinodon_variegatus
ENSG00000123737EXOSC99980.498ENSCVAG00000001098exosc99964.103Cyprinodon_variegatus
ENSG00000123737EXOSC99981.743ENSDARG00000006392exosc910072.438Danio_rerio
ENSG00000123737EXOSC99631.250ENSDNOG00000007964EXOSC78231.250Dasypus_novemcinctus
ENSG00000123737EXOSC99997.925ENSDNOG00000010614EXOSC910095.909Dasypus_novemcinctus
ENSG00000123737EXOSC99530.172ENSDNOG00000019133EXOSC87530.172Dasypus_novemcinctus
ENSG00000123737EXOSC99530.172ENSDORG00000011062Exosc88230.172Dipodomys_ordii
ENSG00000123737EXOSC99996.680ENSDORG00000007684Exosc99697.571Dipodomys_ordii
ENSG00000123737EXOSC99638.627FBgn0030789Rrp456636.264Drosophila_melanogaster
ENSG00000123737EXOSC99996.680ENSETEG00000015190EXOSC99790.118Echinops_telfairi
ENSG00000123737EXOSC99997.095ENSEASG00005018326EXOSC99795.775Equus_asinus_asinus
ENSG00000123737EXOSC99631.250ENSEASG00005008039EXOSC78231.250Equus_asinus_asinus
ENSG00000123737EXOSC99997.510ENSECAG00000024732EXOSC99796.009Equus_caballus
ENSG00000123737EXOSC99631.250ENSECAG00000006539EXOSC78231.250Equus_caballus
ENSG00000123737EXOSC99984.828ENSEEUG00000013683EXOSC99785.681Erinaceus_europaeus
ENSG00000123737EXOSC99930.242ENSELUG00000007128exosc78530.418Esox_lucius
ENSG00000123737EXOSC99979.668ENSELUG00000011222exosc99766.589Esox_lucius
ENSG00000123737EXOSC99630.833ENSFCAG00000013344EXOSC78230.833Felis_catus
ENSG00000123737EXOSC99989.669ENSFCAG00000025246EXOSC910090.157Felis_catus
ENSG00000123737EXOSC99530.603ENSFALG00000008262EXOSC87030.603Ficedula_albicollis
ENSG00000123737EXOSC99986.307ENSFALG00000008302EXOSC99678.302Ficedula_albicollis
ENSG00000123737EXOSC99997.095ENSFDAG00000014446EXOSC910093.394Fukomys_damarensis
ENSG00000123737EXOSC98633.766ENSFDAG00000012581EXOSC77630.045Fukomys_damarensis
ENSG00000123737EXOSC98777.333ENSFHEG00000013345-8277.660Fundulus_heteroclitus
ENSG00000123737EXOSC97133.714ENSFHEG00000009565exosc76033.714Fundulus_heteroclitus
ENSG00000123737EXOSC99331.197ENSGMOG00000007935exosc77931.197Gadus_morhua
ENSG00000123737EXOSC99979.253ENSGMOG00000014066exosc99769.863Gadus_morhua
ENSG00000123737EXOSC99990.456ENSGALG00000011884EXOSC99679.905Gallus_gallus
ENSG00000123737EXOSC98632.468ENSGALG00000030084EXOSC77630.045Gallus_gallus
ENSG00000123737EXOSC99530.603ENSGALG00000017048EXOSC88530.045Gallus_gallus
ENSG00000123737EXOSC99980.913ENSGAFG00000015284exosc99865.962Gambusia_affinis
ENSG00000123737EXOSC99630.992ENSGAFG00000003112exosc79230.403Gambusia_affinis
ENSG00000123737EXOSC99980.498ENSGACG00000018481exosc910065.947Gasterosteus_aculeatus
ENSG00000123737EXOSC99632.099ENSGACG00000003085exosc79230.515Gasterosteus_aculeatus
ENSG00000123737EXOSC98633.766ENSGAGG00000004111EXOSC76830.769Gopherus_agassizii
ENSG00000123737EXOSC99994.191ENSGAGG00000016512EXOSC99683.099Gopherus_agassizii
ENSG00000123737EXOSC99530.603ENSGGOG00000011902EXOSC88230.603Gorilla_gorilla
ENSG00000123737EXOSC99630.833ENSGGOG00000013497EXOSC78230.833Gorilla_gorilla
ENSG00000123737EXOSC910099.089ENSGGOG00000028227EXOSC910099.089Gorilla_gorilla
ENSG00000123737EXOSC99931.452ENSHBUG00000009582exosc79930.612Haplochromis_burtoni
ENSG00000123737EXOSC99982.573ENSHBUG00000001818exosc99771.316Haplochromis_burtoni
ENSG00000123737EXOSC99871.548ENSHGLG00000016703-10070.909Heterocephalus_glaber_female
ENSG00000123737EXOSC98633.766ENSHGLG00000012984EXOSC77630.045Heterocephalus_glaber_female
ENSG00000123737EXOSC99996.266ENSHGLG00000002467-10093.394Heterocephalus_glaber_female
ENSG00000123737EXOSC99990.871ENSHGLG00000000611-9884.235Heterocephalus_glaber_female
ENSG00000123737EXOSC99871.860ENSHGLG00100005612-9970.657Heterocephalus_glaber_male
ENSG00000123737EXOSC99990.871ENSHGLG00100007278-9584.235Heterocephalus_glaber_male
ENSG00000123737EXOSC95130.045ENSHGLG00100005220EXOSC77530.045Heterocephalus_glaber_male
ENSG00000123737EXOSC99996.266ENSHGLG00100015581EXOSC910093.850Heterocephalus_glaber_male
ENSG00000123737EXOSC99980.913ENSHCOG00000013001exosc99864.019Hippocampus_comes
ENSG00000123737EXOSC99978.008ENSIPUG00000004443EXOSC99867.980Ictalurus_punctatus
ENSG00000123737EXOSC99631.250ENSSTOG00000005892EXOSC78231.250Ictidomys_tridecemlineatus
ENSG00000123737EXOSC99996.680ENSSTOG00000007984EXOSC99792.723Ictidomys_tridecemlineatus
ENSG00000123737EXOSC99997.908ENSJJAG00000008858Exosc99898.381Jaculus_jaculus
ENSG00000123737EXOSC99530.172ENSJJAG00000022752-8430.172Jaculus_jaculus
ENSG00000123737EXOSC99631.250ENSJJAG00000010398Exosc78231.250Jaculus_jaculus
ENSG00000123737EXOSC99978.838ENSKMAG00000020177exosc99864.941Kryptolebias_marmoratus
ENSG00000123737EXOSC99930.279ENSLBEG00000027540exosc78530.279Labrus_bergylta
ENSG00000123737EXOSC99982.158ENSLBEG00000019599exosc99866.432Labrus_bergylta
ENSG00000123737EXOSC99331.330ENSLACG00000012065EXOSC77931.330Latimeria_chalumnae
ENSG00000123737EXOSC910066.544ENSLACG00000015203EXOSC910064.200Latimeria_chalumnae
ENSG00000123737EXOSC99983.884ENSLOCG00000002999exosc99884.477Lepisosteus_oculatus
ENSG00000123737EXOSC99998.340ENSLAFG00000009514EXOSC910094.118Loxodonta_africana
ENSG00000123737EXOSC98831.982ENSLAFG00000012738EXOSC77531.982Loxodonta_africana
ENSG00000123737EXOSC99530.172ENSMFAG00000027794EXOSC88230.172Macaca_fascicularis
ENSG00000123737EXOSC910099.317ENSMFAG00000038292EXOSC910099.317Macaca_fascicularis
ENSG00000123737EXOSC99630.417ENSMFAG00000038326EXOSC78230.417Macaca_fascicularis
ENSG00000123737EXOSC99530.172ENSMMUG00000003588EXOSC88230.172Macaca_mulatta
ENSG00000123737EXOSC910099.558ENSMMUG00000009816EXOSC910099.558Macaca_mulatta
ENSG00000123737EXOSC99630.417ENSMMUG00000019130EXOSC78230.417Macaca_mulatta
ENSG00000123737EXOSC910099.317ENSMNEG00000029445EXOSC910099.317Macaca_nemestrina
ENSG00000123737EXOSC99630.417ENSMNEG00000041567EXOSC78230.417Macaca_nemestrina
ENSG00000123737EXOSC99530.172ENSMNEG00000032970EXOSC88230.172Macaca_nemestrina
ENSG00000123737EXOSC910099.089ENSMLEG00000042316EXOSC910099.089Mandrillus_leucophaeus
ENSG00000123737EXOSC99630.417ENSMLEG00000039510EXOSC78230.417Mandrillus_leucophaeus
ENSG00000123737EXOSC99930.242ENSMAMG00000002527exosc78930.242Mastacembelus_armatus
ENSG00000123737EXOSC99980.498ENSMAMG00000006465exosc99966.434Mastacembelus_armatus
ENSG00000123737EXOSC99931.048ENSMZEG00005026454exosc79930.272Maylandia_zebra
ENSG00000123737EXOSC99982.573ENSMZEG00005011461exosc99771.579Maylandia_zebra
ENSG00000123737EXOSC98591.707ENSMGAG00000010649EXOSC99679.487Meleagris_gallopavo
ENSG00000123737EXOSC98632.468ENSMGAG00000011656EXOSC77630.045Meleagris_gallopavo
ENSG00000123737EXOSC99632.083ENSMAUG00000016964Exosc78232.083Mesocricetus_auratus
ENSG00000123737EXOSC910098.347ENSMAUG00000008629Exosc910098.347Mesocricetus_auratus
ENSG00000123737EXOSC99530.172ENSMICG00000003353EXOSC88230.172Microcebus_murinus
ENSG00000123737EXOSC99631.250ENSMICG00000049103EXOSC78231.250Microcebus_murinus
ENSG00000123737EXOSC99997.925ENSMICG00000006994EXOSC910095.909Microcebus_murinus
ENSG00000123737EXOSC98632.468ENSMOCG00000014605Exosc77630.493Microtus_ochrogaster
ENSG00000123737EXOSC99997.925ENSMOCG00000007209Exosc910092.500Microtus_ochrogaster
ENSG00000123737EXOSC99930.279ENSMMOG00000014984exosc78530.279Mola_mola
ENSG00000123737EXOSC99979.668ENSMMOG00000006666exosc99370.959Mola_mola
ENSG00000123737EXOSC99631.250ENSMODG00000011261EXOSC78231.250Monodelphis_domestica
ENSG00000123737EXOSC99996.680ENSMODG00000018934EXOSC910086.937Monodelphis_domestica
ENSG00000123737EXOSC99530.172ENSMODG00000010052EXOSC88230.172Monodelphis_domestica
ENSG00000123737EXOSC99631.405ENSMALG00000009471exosc78131.405Monopterus_albus
ENSG00000123737EXOSC99980.498ENSMALG00000021891exosc99965.306Monopterus_albus
ENSG00000123737EXOSC910098.347MGP_CAROLIEiJ_G0024939Exosc910098.639Mus_caroli
ENSG00000123737EXOSC99631.667MGP_CAROLIEiJ_G0032854Exosc78231.667Mus_caroli
ENSG00000123737EXOSC910098.347ENSMUSG00000027714Exosc910098.639Mus_musculus
ENSG00000123737EXOSC99631.667ENSMUSG00000025785Exosc78231.667Mus_musculus
ENSG00000123737EXOSC910097.521MGP_PahariEiJ_G0026379Exosc910097.521Mus_pahari
ENSG00000123737EXOSC99631.667MGP_PahariEiJ_G0015720Exosc78231.667Mus_pahari
ENSG00000123737EXOSC99631.667MGP_SPRETEiJ_G0034002Exosc78231.667Mus_spretus
ENSG00000123737EXOSC910098.347MGP_SPRETEiJ_G0025873Exosc910098.639Mus_spretus
ENSG00000123737EXOSC98831.222ENSMPUG00000015336EXOSC77230.043Mustela_putorius_furo
ENSG00000123737EXOSC99998.340ENSMPUG00000017410EXOSC910095.227Mustela_putorius_furo
ENSG00000123737EXOSC98131.683ENSMLUG00000014256EXOSC76931.683Myotis_lucifugus
ENSG00000123737EXOSC99996.266ENSMLUG00000005167EXOSC910090.271Myotis_lucifugus
ENSG00000123737EXOSC99630.833ENSNGAG00000018736Exosc78230.833Nannospalax_galili
ENSG00000123737EXOSC99530.603ENSNGAG00000020518Exosc88430.603Nannospalax_galili
ENSG00000123737EXOSC99997.095ENSNGAG00000022671Exosc99097.976Nannospalax_galili
ENSG00000123737EXOSC99931.048ENSNBRG00000018223exosc79930.272Neolamprologus_brichardi
ENSG00000123737EXOSC99982.158ENSNBRG00000019108exosc99567.757Neolamprologus_brichardi
ENSG00000123737EXOSC99630.833ENSNLEG00000006027EXOSC78230.833Nomascus_leucogenys
ENSG00000123737EXOSC910098.633ENSNLEG00000009300EXOSC910098.633Nomascus_leucogenys
ENSG00000123737EXOSC98131.188ENSMEUG00000013026EXOSC77331.188Notamacropus_eugenii
ENSG00000123737EXOSC98797.333ENSMEUG00000000117EXOSC99776.941Notamacropus_eugenii
ENSG00000123737EXOSC99993.361ENSOPRG00000001158EXOSC910084.532Ochotona_princeps
ENSG00000123737EXOSC97532.086ENSOPRG00000016637EXOSC77832.086Ochotona_princeps
ENSG00000123737EXOSC99530.172ENSODEG00000009230-8230.303Octodon_degus
ENSG00000123737EXOSC99996.680ENSODEG00000000589EXOSC99794.811Octodon_degus
ENSG00000123737EXOSC98530.144ENSODEG00000017401-7730.144Octodon_degus
ENSG00000123737EXOSC99632.083ENSODEG00000011518EXOSC78232.083Octodon_degus
ENSG00000123737EXOSC99931.048ENSONIG00000019664exosc79930.272Oreochromis_niloticus
ENSG00000123737EXOSC99982.573ENSONIG00000003399exosc99966.900Oreochromis_niloticus
ENSG00000123737EXOSC99531.034ENSOANG00000015500EXOSC88330.233Ornithorhynchus_anatinus
ENSG00000123737EXOSC98533.333ENSOANG00000006807EXOSC77833.028Ornithorhynchus_anatinus
ENSG00000123737EXOSC99992.531ENSOANG00000015114EXOSC99684.597Ornithorhynchus_anatinus
ENSG00000123737EXOSC99996.680ENSOCUG00000003046EXOSC910093.636Oryctolagus_cuniculus
ENSG00000123737EXOSC99630.833ENSOCUG00000000939EXOSC78230.833Oryctolagus_cuniculus
ENSG00000123737EXOSC99931.048ENSORLG00000002251exosc79230.515Oryzias_latipes
ENSG00000123737EXOSC99980.498ENSORLG00000001989exosc99866.824Oryzias_latipes
ENSG00000123737EXOSC99930.645ENSORLG00020008788exosc79230.147Oryzias_latipes_hni
ENSG00000123737EXOSC99980.498ENSORLG00020014069exosc99866.824Oryzias_latipes_hni
ENSG00000123737EXOSC98330.244ENSORLG00015019052exosc89430.252Oryzias_latipes_hsok
ENSG00000123737EXOSC99930.645ENSORLG00015015968exosc79230.147Oryzias_latipes_hsok
ENSG00000123737EXOSC99980.083ENSORLG00015013630exosc99866.824Oryzias_latipes_hsok
ENSG00000123737EXOSC99979.668ENSOMEG00000021965exosc99866.588Oryzias_melastigma
ENSG00000123737EXOSC99632.365ENSOMEG00000007979exosc79230.147Oryzias_melastigma
ENSG00000123737EXOSC99997.510ENSOGAG00000016104EXOSC99794.848Otolemur_garnettii
ENSG00000123737EXOSC99630.833ENSOGAG00000001011EXOSC78230.833Otolemur_garnettii
ENSG00000123737EXOSC95230.303ENSOGAG00000002745EXOSC88230.303Otolemur_garnettii
ENSG00000123737EXOSC99997.510ENSOARG00000014520EXOSC910094.773Ovis_aries
ENSG00000123737EXOSC99531.466ENSOARG00000010229EXOSC89130.620Ovis_aries
ENSG00000123737EXOSC99830.612ENSOARG00000011298EXOSC78430.612Ovis_aries
ENSG00000123737EXOSC99630.417ENSPPAG00000043557EXOSC78230.417Pan_paniscus
ENSG00000123737EXOSC99530.603ENSPPAG00000027267EXOSC88230.603Pan_paniscus
ENSG00000123737EXOSC910099.089ENSPPAG00000043865EXOSC910099.089Pan_paniscus
ENSG00000123737EXOSC99631.250ENSPPRG00000006919EXOSC78231.250Panthera_pardus
ENSG00000123737EXOSC99997.925ENSPPRG00000014689-10095.672Panthera_pardus
ENSG00000123737EXOSC98448.936ENSPPRG00000002152-8764.979Panthera_pardus
ENSG00000123737EXOSC98832.127ENSPTIG00000013985EXOSC77532.127Panthera_tigris_altaica
ENSG00000123737EXOSC99997.925ENSPTIG00000010017EXOSC910095.672Panthera_tigris_altaica
ENSG00000123737EXOSC99530.603ENSPTRG00000005790EXOSC88230.603Pan_troglodytes
ENSG00000123737EXOSC910099.544ENSPTRG00000044568EXOSC910099.544Pan_troglodytes
ENSG00000123737EXOSC99630.417ENSPTRG00000014830EXOSC78230.417Pan_troglodytes
ENSG00000123737EXOSC99630.417ENSPANG00000012918EXOSC78230.417Papio_anubis
ENSG00000123737EXOSC99530.172ENSPANG00000019344EXOSC88230.172Papio_anubis
ENSG00000123737EXOSC910099.317ENSPANG00000000792EXOSC910099.317Papio_anubis
ENSG00000123737EXOSC99981.743ENSPKIG00000005890exosc99668.075Paramormyrops_kingsleyae
ENSG00000123737EXOSC95130.222ENSPSIG00000010902EXOSC78330.263Pelodiscus_sinensis
ENSG00000123737EXOSC99530.603ENSPSIG00000002406EXOSC88230.603Pelodiscus_sinensis
ENSG00000123737EXOSC97894.681ENSPSIG00000016020EXOSC99680.697Pelodiscus_sinensis
ENSG00000123737EXOSC99330.000ENSPMGG00000018185exosc89430.224Periophthalmus_magnuspinnatus
ENSG00000123737EXOSC99982.988ENSPMGG00000019387exosc99782.353Periophthalmus_magnuspinnatus
ENSG00000123737EXOSC99530.172ENSPEMG00000010801Exosc88230.172Peromyscus_maniculatus_bairdii
ENSG00000123737EXOSC99998.340ENSPEMG00000000544Exosc910091.837Peromyscus_maniculatus_bairdii
ENSG00000123737EXOSC99631.667ENSPEMG00000022845Exosc78231.667Peromyscus_maniculatus_bairdii
ENSG00000123737EXOSC97876.596ENSPMAG00000004877exosc99460.800Petromyzon_marinus
ENSG00000123737EXOSC99230.667ENSPMAG00000004395exosc89330.943Petromyzon_marinus
ENSG00000123737EXOSC99630.833ENSPCIG00000025150EXOSC78230.833Phascolarctos_cinereus
ENSG00000123737EXOSC99530.172ENSPCIG00000021634EXOSC88230.172Phascolarctos_cinereus
ENSG00000123737EXOSC99995.851ENSPCIG00000011193EXOSC99787.383Phascolarctos_cinereus
ENSG00000123737EXOSC99980.913ENSPFOG00000016008exosc99765.802Poecilia_formosa
ENSG00000123737EXOSC99630.579ENSPFOG00000005301exosc78130.579Poecilia_formosa
ENSG00000123737EXOSC99980.913ENSPLAG00000016052exosc99765.957Poecilia_latipinna
ENSG00000123737EXOSC99980.913ENSPMEG00000023212exosc910062.470Poecilia_mexicana
ENSG00000123737EXOSC99630.165ENSPMEG00000019419exosc78130.165Poecilia_mexicana
ENSG00000123737EXOSC99980.913ENSPREG00000002069exosc99265.412Poecilia_reticulata
ENSG00000123737EXOSC99530.172ENSPPYG00000005287EXOSC88230.172Pongo_abelii
ENSG00000123737EXOSC910099.089ENSPPYG00000015037EXOSC910099.089Pongo_abelii
ENSG00000123737EXOSC99630.833ENSPPYG00000013949-8230.833Pongo_abelii
ENSG00000123737EXOSC99232.609ENSPCAG00000001772EXOSC77832.609Procavia_capensis
ENSG00000123737EXOSC99297.959ENSPCAG00000011287EXOSC98692.793Procavia_capensis
ENSG00000123737EXOSC98831.674ENSPCOG00000024892EXOSC78131.674Propithecus_coquereli
ENSG00000123737EXOSC99530.172ENSPCOG00000018867EXOSC88230.172Propithecus_coquereli
ENSG00000123737EXOSC99997.925ENSPCOG00000003962EXOSC910095.682Propithecus_coquereli
ENSG00000123737EXOSC99631.950ENSPVAG00000012445EXOSC78431.579Pteropus_vampyrus
ENSG00000123737EXOSC98498.113ENSPVAG00000001284EXOSC98398.113Pteropus_vampyrus
ENSG00000123737EXOSC99931.048ENSPNYG00000016020exosc79930.272Pundamilia_nyererei
ENSG00000123737EXOSC99981.328ENSPNAG00000000578exosc98370.388Pygocentrus_nattereri
ENSG00000123737EXOSC97134.286ENSPNAG00000015645exosc76034.286Pygocentrus_nattereri
ENSG00000123737EXOSC99631.667ENSRNOG00000060337Exosc78231.667Rattus_norvegicus
ENSG00000123737EXOSC99998.340ENSRNOG00000014674Exosc910092.045Rattus_norvegicus
ENSG00000123737EXOSC910098.861ENSRBIG00000030341EXOSC910098.861Rhinopithecus_bieti
ENSG00000123737EXOSC99630.417ENSRBIG00000040862EXOSC78230.417Rhinopithecus_bieti
ENSG00000123737EXOSC99530.172ENSRBIG00000027590EXOSC88230.172Rhinopithecus_bieti
ENSG00000123737EXOSC910098.861ENSRROG00000040804EXOSC910098.861Rhinopithecus_roxellana
ENSG00000123737EXOSC99530.172ENSRROG00000022383-8230.172Rhinopithecus_roxellana
ENSG00000123737EXOSC99630.417ENSRROG00000038150EXOSC78230.417Rhinopithecus_roxellana
ENSG00000123737EXOSC99836.255YDR280W-9534.828Saccharomyces_cerevisiae
ENSG00000123737EXOSC99530.172ENSSBOG00000004631EXOSC88230.172Saimiri_boliviensis_boliviensis
ENSG00000123737EXOSC99631.250ENSSBOG00000032667EXOSC78231.250Saimiri_boliviensis_boliviensis
ENSG00000123737EXOSC99998.340ENSSBOG00000020744EXOSC910097.045Saimiri_boliviensis_boliviensis
ENSG00000123737EXOSC99330.802ENSSHAG00000003370EXOSC78030.802Sarcophilus_harrisii
ENSG00000123737EXOSC99996.680ENSSHAG00000002000EXOSC910087.104Sarcophilus_harrisii
ENSG00000123737EXOSC99530.603ENSSHAG00000005532EXOSC88230.603Sarcophilus_harrisii
ENSG00000123737EXOSC99985.062ENSSFOG00015012903exosc99771.194Scleropages_formosus
ENSG00000123737EXOSC99981.743ENSSMAG00000012071exosc99866.822Scophthalmus_maximus
ENSG00000123737EXOSC99982.573ENSSDUG00000002313exosc99868.000Seriola_dumerili
ENSG00000123737EXOSC99982.573ENSSLDG00000020591exosc99867.765Seriola_lalandi_dorsalis
ENSG00000123737EXOSC97133.714ENSSLDG00000024102exosc75733.714Seriola_lalandi_dorsalis
ENSG00000123737EXOSC95999.010ENSSARG00000000653-7793.377Sorex_araneus
ENSG00000123737EXOSC99992.946ENSSPUG00000010200EXOSC99782.227Sphenodon_punctatus
ENSG00000123737EXOSC99980.498ENSSPAG00000003892exosc99964.706Stegastes_partitus
ENSG00000123737EXOSC99998.340ENSSSCG00000009096EXOSC910095.000Sus_scrofa
ENSG00000123737EXOSC99531.466ENSSSCG00000009358EXOSC87930.620Sus_scrofa
ENSG00000123737EXOSC98632.468ENSSSCG00000011300EXOSC77630.045Sus_scrofa
ENSG00000123737EXOSC99184.545ENSTGUG00000001938-9676.617Taeniopygia_guttata
ENSG00000123737EXOSC99530.342ENSTGUG00000011908EXOSC88430.342Taeniopygia_guttata
ENSG00000123737EXOSC99630.000ENSTGUG00000004961EXOSC78330.000Taeniopygia_guttata
ENSG00000123737EXOSC97962.703ENSTGUG00000015146-10075.610Taeniopygia_guttata
ENSG00000123737EXOSC98774.667ENSTRUG00000000680-10076.596Takifugu_rubripes
ENSG00000123737EXOSC99979.668ENSTRUG00000004119exosc910066.747Takifugu_rubripes
ENSG00000123737EXOSC99978.838ENSTNIG00000004601exosc910066.585Tetraodon_nigroviridis
ENSG00000123737EXOSC99182.519ENSTBEG00000012684EXOSC910082.519Tupaia_belangeri
ENSG00000123737EXOSC99632.083ENSTTRG00000007189EXOSC78232.083Tursiops_truncatus
ENSG00000123737EXOSC99530.172ENSTTRG00000007906EXOSC88330.172Tursiops_truncatus
ENSG00000123737EXOSC99997.925ENSTTRG00000001584EXOSC98398.780Tursiops_truncatus
ENSG00000123737EXOSC98293.084ENSUAMG00000011140EXOSC99795.101Ursus_americanus
ENSG00000123737EXOSC99630.417ENSUAMG00000004308EXOSC78230.417Ursus_americanus
ENSG00000123737EXOSC99998.340ENSUMAG00000003848EXOSC910095.909Ursus_maritimus
ENSG00000123737EXOSC99989.627ENSVPAG00000012110EXOSC910080.306Vicugna_pacos
ENSG00000123737EXOSC98433.010ENSVPAG00000007287EXOSC87233.010Vicugna_pacos
ENSG00000123737EXOSC99630.833ENSVVUG00000007036EXOSC78230.833Vulpes_vulpes
ENSG00000123737EXOSC99997.925ENSVVUG00000013324EXOSC910095.682Vulpes_vulpes
ENSG00000123737EXOSC99330.901ENSXETG00000020144exosc77930.901Xenopus_tropicalis
ENSG00000123737EXOSC99985.477ENSXETG00000021118exosc99974.939Xenopus_tropicalis
ENSG00000123737EXOSC96930.058ENSXCOG00000019573exosc77530.058Xiphophorus_couchianus
ENSG00000123737EXOSC99978.423ENSXCOG00000011971exosc99680.258Xiphophorus_couchianus
ENSG00000123737EXOSC99980.913ENSXMAG00000017823exosc910066.184Xiphophorus_maculatus
ENSG00000123737EXOSC99630.165ENSXMAG00000014296exosc78130.165Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:00001753'-5'-exoribonuclease activity11879549.NASFunction
GO:0000176nuclear exosome (RNase complex)21873635.IBAComponent
GO:0000176nuclear exosome (RNase complex)22791713.IDAComponent
GO:0000176nuclear exosome (RNase complex)11879549.NASComponent
GO:0000177cytoplasmic exosome (RNase complex)21873635.IBAComponent
GO:0000178exosome (RNase complex)20531389.IDAComponent
GO:0000228nuclear chromosome24105744.IDAComponent
GO:0000467exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)21873635.IBAProcess
GO:0000956nuclear-transcribed mRNA catabolic process17545563.IMPProcess
GO:0001102RNA polymerase II activating transcription factor binding-IEAFunction
GO:0003723RNA binding22658674.HDAFunction
GO:0003723RNA binding11879549.NASFunction
GO:0004532exoribonuclease activity17174896.IDAFunction
GO:0005515protein binding12788944.15231747.20531386.24105744.26496610.30021884.IPIFunction
GO:0005634nucleus17545563.IDAComponent
GO:0005654nucleoplasm24105744.IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus24105744.IDAComponent
GO:0005737cytoplasm17545563.IDAComponent
GO:0005829cytosol-TASComponent
GO:0006364rRNA processing11879549.NASProcess
GO:0006364rRNA processing-TASProcess
GO:0006955immune response11879549.NASProcess
GO:0016075rRNA catabolic process21873635.IBAProcess
GO:0017091AU-rich element binding21873635.IBAFunction
GO:0017091AU-rich element binding11782436.IDAFunction
GO:0030307positive regulation of cell growth17545563.IMPProcess
GO:0034427nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'21873635.IBAProcess
GO:0034473U1 snRNA 3'-end processing21873635.IBAProcess
GO:0034475U4 snRNA 3'-end processing21873635.IBAProcess
GO:0034476U5 snRNA 3'-end processing21873635.IBAProcess
GO:0043488regulation of mRNA stability-TASProcess
GO:0043928exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay21873635.IBAProcess
GO:0043928exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay11782436.IMPProcess
GO:0043928exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay-TASProcess
GO:0045944positive regulation of transcription by RNA polymerase II-IEAProcess
GO:0070062extracellular exosome18570454.HDAComponent
GO:0071028nuclear mRNA surveillance21873635.IBAProcess
GO:0071028nuclear mRNA surveillance17545563.IMPProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process21873635.IBAProcess
GO:0071035nuclear polyadenylation-dependent rRNA catabolic process16455498.IMPProcess
GO:0071038nuclear polyadenylation-dependent tRNA catabolic process21873635.IBAProcess
GO:0071042nuclear polyadenylation-dependent mRNA catabolic process21873635.IBAProcess

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