EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000131848 (Gene tree)
Gene ID: 79149
Gene Symbol: ZSCAN5A
Alias: MGC4161|ZNF495|ZSCAN5
Full Name: zinc finger and SCAN domain containing 5A
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 148,714 bases
Position: chr19:56,219,670-56,368,383
Accession: 23710
RBP type: canonical RBP
Summary: ZSCAN5A (Zinc Finger And SCAN Domain Containing 5A) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and DNA-binding transcription factor activity, RNA polymerase II-specific. An important paralog of this gene is ZSCAN5C.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000466445	zf-C2H2	PF00096.26	5.3e-18	1	2
ENSP00000466445	zf-C2H2	PF00096.26	5.3e-18	2	2
ENSP00000467238	zf-C2H2	PF00096.26	3.4e-17	1	2
ENSP00000467238	zf-C2H2	PF00096.26	3.4e-17	2	2
ENSP00000375593	zf-C2H2	PF00096.26	3.5e-17	1	2
ENSP00000375593	zf-C2H2	PF00096.26	3.5e-17	2	2
ENSP00000467631	zf-C2H2	PF00096.26	3.5e-17	1	2
ENSP00000467631	zf-C2H2	PF00096.26	3.5e-17	2	2
ENSP00000466445	zf-met	PF12874.7	5.7e-08	1	2
ENSP00000466445	zf-met	PF12874.7	5.7e-08	2	2
ENSP00000467238	zf-met	PF12874.7	2.3e-06	1	2
ENSP00000467238	zf-met	PF12874.7	2.3e-06	2	2
ENSP00000375593	zf-met	PF12874.7	2.3e-06	1	2
ENSP00000375593	zf-met	PF12874.7	2.3e-06	2	2
ENSP00000467631	zf-met	PF12874.7	2.3e-06	1	2
ENSP00000467631	zf-met	PF12874.7	2.3e-06	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000592101	ZSCAN5A-213	1108	-	-	- (aa)	-	-
ENST00000592679	ZSCAN5A-216	923	-	ENSP00000466830	38 (aa)	-	K7EN85
ENST00000391713	ZSCAN5A-201	3562	XM_005259254	ENSP00000375593	496 (aa)	XP_005259311	Q9BUG6
ENST00000587075	ZSCAN5A-204	641	-	-	- (aa)	-	-
ENST00000586031	ZSCAN5A-203	544	-	-	- (aa)	-	-
ENST00000590675	ZSCAN5A-211	570	-	-	- (aa)	-	-
ENST00000587614	ZSCAN5A-207	589	-	-	- (aa)	-	-
ENST00000589279	ZSCAN5A-210	686	-	-	- (aa)	-	-
ENST00000592509	ZSCAN5A-215	589	-	ENSP00000468797	105 (aa)	-	K7ESN6
ENST00000588955	ZSCAN5A-209	576	-	ENSP00000468008	84 (aa)	-	K7EQW6
ENST00000585670	ZSCAN5A-202	314	-	-	- (aa)	-	-
ENST00000588442	ZSCAN5A-208	576	-	ENSP00000468675	42 (aa)	-	K7ESE4
ENST00000592355	ZSCAN5A-214	1813	XM_006723377	ENSP00000467238	495 (aa)	XP_006723440	A0A0C4DGQ1
ENST00000587492	ZSCAN5A-206	1542	-	ENSP00000466445	350 (aa)	-	K7EMC4
ENST00000587340	ZSCAN5A-205	2450	-	ENSP00000467631	496 (aa)	-	Q9BUG6
ENST00000591078	ZSCAN5A-212	686	-	-	- (aa)	-	-
ENST00000593106	ZSCAN5A-217	849	-	ENSP00000464936	190 (aa)	-	K7EIX9

Gene Model

Click here to download ENSG00000131848's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000131848	rs34259704	19	56339799	C	Pediatric bone mineral density (hip)	28181694	[0.36-0.9] unit increase	0.626107	EFO_0007702

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000131848's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000131848	ZSCAN5A	100	83.810	ENSANAG00000036793	-	99	68.200	Aotus_nancymaae
ENSG00000131848	ZSCAN5A	100	85.714	ENSANAG00000030428	-	88	84.444	Aotus_nancymaae
ENSG00000131848	ZSCAN5A	100	78.024	ENSCJAG00000038440	-	100	78.024	Callithrix_jacchus
ENSG00000131848	ZSCAN5A	100	79.048	ENSCJAG00000044165	-	99	75.960	Callithrix_jacchus
ENSG00000131848	ZSCAN5A	100	83.810	ENSCCAG00000021033	-	99	76.364	Cebus_capucinus
ENSG00000131848	ZSCAN5A	100	84.762	ENSCCAG00000028957	-	100	83.871	Cebus_capucinus
ENSG00000131848	ZSCAN5A	100	80.952	ENSCCAG00000036576	-	100	78.226	Cebus_capucinus
ENSG00000131848	ZSCAN5A	100	94.286	ENSCATG00000039708	ZSCAN5A	99	92.727	Cercocebus_atys
ENSG00000131848	ZSCAN5A	99	85.577	ENSCATG00000040802	ZSCAN5C	100	78.270	Cercocebus_atys
ENSG00000131848	ZSCAN5A	100	73.158	ENSCSAG00000001674	-	90	76.957	Chlorocebus_sabaeus
ENSG00000131848	ZSCAN5A	99	85.577	ENSCSAG00000001677	ZSCAN5C	100	79.234	Chlorocebus_sabaeus
ENSG00000131848	ZSCAN5A	100	95.238	ENSCSAG00000001675	ZSCAN5A	100	92.137	Chlorocebus_sabaeus
ENSG00000131848	ZSCAN5A	100	93.333	ENSCANG00000022972	ZSCAN5A	100	92.137	Colobus_angolensis_palliatus
ENSG00000131848	ZSCAN5A	100	87.619	ENSCANG00000004772	ZSCAN5C	100	82.661	Colobus_angolensis_palliatus
ENSG00000131848	ZSCAN5A	100	98.095	ENSGGOG00000024785	ZSCAN5A	100	97.172	Gorilla_gorilla
ENSG00000131848	ZSCAN5A	100	88.571	ENSGGOG00000014089	ZSCAN5C	100	84.677	Gorilla_gorilla
ENSG00000131848	ZSCAN5A	100	94.286	ENSMFAG00000039248	ZSCAN5A	99	92.929	Macaca_fascicularis
ENSG00000131848	ZSCAN5A	100	94.286	ENSMMUG00000045637	ZSCAN5A	99	92.929	Macaca_mulatta
ENSG00000131848	ZSCAN5A	100	95.238	ENSMNEG00000041679	ZSCAN5A	99	93.131	Macaca_nemestrina
ENSG00000131848	ZSCAN5A	100	95.238	ENSMLEG00000043375	ZSCAN5A	99	92.525	Mandrillus_leucophaeus
ENSG00000131848	ZSCAN5A	100	81.905	ENSNLEG00000010789	ZSCAN5C	100	81.452	Nomascus_leucogenys
ENSG00000131848	ZSCAN5A	100	95.238	ENSNLEG00000010791	ZSCAN5A	99	91.111	Nomascus_leucogenys
ENSG00000131848	ZSCAN5A	100	87.619	ENSPPAG00000027548	ZSCAN5C	100	83.065	Pan_paniscus
ENSG00000131848	ZSCAN5A	100	100.000	ENSPPAG00000035437	ZSCAN5A	100	98.589	Pan_paniscus
ENSG00000131848	ZSCAN5A	100	100.000	ENSPTRG00000050956	ZSCAN5A	100	98.790	Pan_troglodytes
ENSG00000131848	ZSCAN5A	100	87.619	ENSPTRG00000043651	ZSCAN5C	100	82.661	Pan_troglodytes
ENSG00000131848	ZSCAN5A	100	95.238	ENSPANG00000032661	ZSCAN5A	99	93.333	Papio_anubis
ENSG00000131848	ZSCAN5A	99	84.615	ENSPANG00000030358	ZSCAN5C	100	78.831	Papio_anubis
ENSG00000131848	ZSCAN5A	100	84.762	ENSPPYG00000010443	ZSCAN5C	100	82.460	Pongo_abelii
ENSG00000131848	ZSCAN5A	100	99.048	ENSPPYG00000010444	ZSCAN5A	100	95.161	Pongo_abelii
ENSG00000131848	ZSCAN5A	100	76.842	ENSRBIG00000036844	ZSCAN5C	99	73.265	Rhinopithecus_bieti
ENSG00000131848	ZSCAN5A	98	90.962	ENSRBIG00000033489	ZSCAN5A	85	90.962	Rhinopithecus_bieti
ENSG00000131848	ZSCAN5A	100	85.714	ENSRROG00000041783	ZSCAN5C	100	81.048	Rhinopithecus_roxellana
ENSG00000131848	ZSCAN5A	100	94.286	ENSRROG00000041579	ZSCAN5A	100	93.548	Rhinopithecus_roxellana
ENSG00000131848	ZSCAN5A	99	83.654	ENSSBOG00000027579	-	99	76.970	Saimiri_boliviensis_boliviensis
ENSG00000131848	ZSCAN5A	100	84.762	ENSSBOG00000017675	-	88	83.603	Saimiri_boliviensis_boliviensis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function