EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000134108 (Gene tree)
Gene ID
55207
Gene Symbol
ARL8B
Alias
FLJ10702|Gie1|ARL10C
Full Name
ADP ribosylation factor like GTPase 8B
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
58,697 bases
Position
chr3:5,122,220-5,180,916
Accession
25564
RBP type
canonical RBP
Summary
ARL8B (ADP Ribosylation Factor Like GTPase 8B) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include GTP binding and obsolete signal transducer activity. An important paralog of this gene is ARL8A.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000256496MMR_HSR1PF01926.233.4e-0511
ENSP00000479202MMR_HSR1PF01926.233.4e-0511
ENSP00000402996MMR_HSR1PF01926.230.0001511

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
25908847The small GTPase Arl8b regulates assembly of the mammalian HOPS complex on lysosomes.J Cell Sci2015 May 1Khatter Ddoi: 10.1242/jcs.162651
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000476343ARL8B-207207--- (aa)--
ENST00000455168ARL8B-2051641-ENSP00000400831103 (aa)-F2Z344
ENST00000444332ARL8B-204732--- (aa)--
ENST00000429403ARL8B-203709-ENSP00000405196102 (aa)-F8WAW5
ENST00000419534ARL8B-2021684-ENSP00000402996163 (aa)-Q9NVJ2
ENST00000256496ARL8B-2013005-ENSP00000256496186 (aa)-Q9NVJ2
ENST00000611208ARL8B-2082981-ENSP00000479202186 (aa)-Q9NVJ2
ENST00000468010ARL8B-206452--- (aa)--
Gene Model
Click here to download ENSG00000134108's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000134108Intervertebral disc disease7E-622993228
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000134108rs1191865435146561CDisc degeneration (lumbar)22993228[0.063-0.157] unit decrease0.11EFO_0004994
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000134108's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000134108ARL8B10096.237ENSAPOG00000018714arl8ba10096.237Acanthochromis_polyacanthus
ENSG00000134108ARL8B10098.387ENSAPOG00000013328arl8bb10098.387Acanthochromis_polyacanthus
ENSG00000134108ARL8B10096.774ENSACIG00000008614arl8ba10096.774Amphilophus_citrinellus
ENSG00000134108ARL8B10097.849ENSACIG00000009595arl8bb10097.849Amphilophus_citrinellus
ENSG00000134108ARL8B10096.237ENSAOCG00000002781arl8ba10096.237Amphiprion_ocellaris
ENSG00000134108ARL8B10098.387ENSAOCG00000024419arl8bb10098.387Amphiprion_ocellaris
ENSG00000134108ARL8B10096.237ENSAPEG00000002399arl8ba10096.237Amphiprion_percula
ENSG00000134108ARL8B10098.387ENSAPEG00000022867arl8bb10098.387Amphiprion_percula
ENSG00000134108ARL8B10096.237ENSATEG00000024817arl8ba10096.237Anabas_testudineus
ENSG00000134108ARL8B10098.387ENSATEG00000009204arl8bb10098.387Anabas_testudineus
ENSG00000134108ARL8B10098.387ENSACAG00000012512ARL8B9998.387Anolis_carolinensis
ENSG00000134108ARL8B100100.000ENSANAG00000021118ARL8B100100.000Aotus_nancymaae
ENSG00000134108ARL8B10096.237ENSACLG00000013597arl8ba10096.237Astatotilapia_calliptera
ENSG00000134108ARL8B10098.387ENSACLG00000021872arl8bb10098.387Astatotilapia_calliptera
ENSG00000134108ARL8B10095.699ENSAMXG00000032775arl8bb10095.699Astyanax_mexicanus
ENSG00000134108ARL8B10095.161ENSAMXG00000030683arl8ba10095.161Astyanax_mexicanus
ENSG00000134108ARL8B100100.000ENSBTAG00000012902ARL8B100100.000Bos_taurus
ENSG00000134108ARL8B100100.000ENSCJAG00000046554ARL8B100100.000Callithrix_jacchus
ENSG00000134108ARL8B100100.000ENSCAFG00000005617ARL8B100100.000Canis_familiaris
ENSG00000134108ARL8B100100.000ENSCAFG00020009368ARL8B100100.000Canis_lupus_dingo
ENSG00000134108ARL8B10099.462ENSCPOG00000031098ARL8B10099.462Cavia_porcellus
ENSG00000134108ARL8B100100.000ENSCCAG00000028492ARL8B100100.000Cebus_capucinus
ENSG00000134108ARL8B100100.000ENSCATG00000039869ARL8B100100.000Cercocebus_atys
ENSG00000134108ARL8B100100.000ENSCSAG00000010899ARL8B78100.000Chlorocebus_sabaeus
ENSG00000134108ARL8B10097.849ENSCPBG00000014937ARL8B10097.849Chrysemys_picta_bellii
ENSG00000134108ARL8B10086.559ENSCING00000024495-10086.559Ciona_intestinalis
ENSG00000134108ARL8B10086.631ENSCSAVG00000008336-10087.059Ciona_savignyi
ENSG00000134108ARL8B100100.000ENSCANG00000032641ARL8B100100.000Colobus_angolensis_palliatus
ENSG00000134108ARL8B100100.000ENSCGRG00001018115Arl8b100100.000Cricetulus_griseus_chok1gshd
ENSG00000134108ARL8B100100.000ENSCGRG00000016383Arl8b100100.000Cricetulus_griseus_crigri
ENSG00000134108ARL8B10096.237ENSCSEG00000014248-8896.237Cynoglossus_semilaevis
ENSG00000134108ARL8B10095.699ENSCSEG00000021772arl8ba10095.699Cynoglossus_semilaevis
ENSG00000134108ARL8B10096.774ENSCVAG00000020378arl8ba10096.774Cyprinodon_variegatus
ENSG00000134108ARL8B8998.795ENSCVAG00000005239ARL8B10098.795Cyprinodon_variegatus
ENSG00000134108ARL8B10097.312ENSDARG00000006915arl8ba10097.312Danio_rerio
ENSG00000134108ARL8B10094.086ENSDARG00000070318arl8bb10094.086Danio_rerio
ENSG00000134108ARL8B100100.000ENSDNOG00000046163ARL8B78100.000Dasypus_novemcinctus
ENSG00000134108ARL8B10099.462ENSDORG00000023904Arl8b10099.462Dipodomys_ordii
ENSG00000134108ARL8B9185.882ENSETEG00000011407ARL8B10085.882Echinops_telfairi
ENSG00000134108ARL8B10094.086ENSEBUG00000009183arl8ba10094.086Eptatretus_burgeri
ENSG00000134108ARL8B100100.000ENSEASG00005013084ARL8B100100.000Equus_asinus_asinus
ENSG00000134108ARL8B100100.000ENSECAG00000013084ARL8B100100.000Equus_caballus
ENSG00000134108ARL8B9197.647ENSEEUG00000000612ARL8B10097.647Erinaceus_europaeus
ENSG00000134108ARL8B10095.161ENSELUG00000003984arl8bb7795.161Esox_lucius
ENSG00000134108ARL8B10096.774ENSELUG00000009390arl8ba10096.774Esox_lucius
ENSG00000134108ARL8B100100.000ENSFCAG00000000736ARL8B100100.000Felis_catus
ENSG00000134108ARL8B10099.462ENSFDAG00000001253ARL8B10099.462Fukomys_damarensis
ENSG00000134108ARL8B10097.849ENSFHEG00000019579arl8bb8997.849Fundulus_heteroclitus
ENSG00000134108ARL8B10097.312ENSFHEG00000020247arl8ba10097.312Fundulus_heteroclitus
ENSG00000134108ARL8B10097.312ENSGMOG00000002416arl8bb10097.312Gadus_morhua
ENSG00000134108ARL8B10098.387ENSGALG00000008314ARL8B10098.387Gallus_gallus
ENSG00000134108ARL8B10097.312ENSGAFG00000008497arl8bb10097.312Gambusia_affinis
ENSG00000134108ARL8B9197.059ENSGAFG00000010938arl8ba9397.059Gambusia_affinis
ENSG00000134108ARL8B10096.237ENSGACG00000011972arl8bb10096.237Gasterosteus_aculeatus
ENSG00000134108ARL8B10094.086ENSGACG00000012267arl8ba10094.086Gasterosteus_aculeatus
ENSG00000134108ARL8B100100.000ENSGGOG00000004952ARL8B100100.000Gorilla_gorilla
ENSG00000134108ARL8B10096.237ENSHBUG00000002201arl8ba10096.237Haplochromis_burtoni
ENSG00000134108ARL8B10098.387ENSHBUG00000014610arl8bb10098.387Haplochromis_burtoni
ENSG00000134108ARL8B10099.462ENSHGLG00000001846ARL8B10099.462Heterocephalus_glaber_female
ENSG00000134108ARL8B10099.462ENSHGLG00100001048ARL8B10099.462Heterocephalus_glaber_male
ENSG00000134108ARL8B10095.161ENSHCOG00000000920arl8ba10095.161Hippocampus_comes
ENSG00000134108ARL8B10096.774ENSHCOG00000010468arl8bb10096.774Hippocampus_comes
ENSG00000134108ARL8B10094.624ENSIPUG00000000931arl8ba10094.624Ictalurus_punctatus
ENSG00000134108ARL8B10094.624ENSIPUG00000021761arl8bb10094.624Ictalurus_punctatus
ENSG00000134108ARL8B10099.462ENSSTOG00000009294ARL8B10099.462Ictidomys_tridecemlineatus
ENSG00000134108ARL8B10095.699ENSKMAG00000006196arl8ba10095.699Kryptolebias_marmoratus
ENSG00000134108ARL8B10097.312ENSKMAG00000020329arl8bb10097.312Kryptolebias_marmoratus
ENSG00000134108ARL8B10087.634ENSLBEG00000019016arl8bb10087.634Labrus_bergylta
ENSG00000134108ARL8B10096.237ENSLBEG00000022310arl8ba8596.237Labrus_bergylta
ENSG00000134108ARL8B10096.791ENSLOCG00000010957arl8bb9996.791Lepisosteus_oculatus
ENSG00000134108ARL8B100100.000ENSLAFG00000007764ARL8B100100.000Loxodonta_africana
ENSG00000134108ARL8B100100.000ENSMFAG00000035233ARL8B100100.000Macaca_fascicularis
ENSG00000134108ARL8B100100.000ENSMMUG00000008810ARL8B100100.000Macaca_mulatta
ENSG00000134108ARL8B100100.000ENSMNEG00000029717ARL8B100100.000Macaca_nemestrina
ENSG00000134108ARL8B100100.000ENSMLEG00000038749ARL8B100100.000Mandrillus_leucophaeus
ENSG00000134108ARL8B10095.161ENSMAMG00000016958arl8ba10095.161Mastacembelus_armatus
ENSG00000134108ARL8B10097.849ENSMAMG00000023379arl8bb10097.849Mastacembelus_armatus
ENSG00000134108ARL8B10098.387ENSMZEG00005010708arl8bb10098.387Maylandia_zebra
ENSG00000134108ARL8B10096.237ENSMZEG00005015103arl8ba10096.237Maylandia_zebra
ENSG00000134108ARL8B100100.000ENSMAUG00000016691Arl8b100100.000Mesocricetus_auratus
ENSG00000134108ARL8B100100.000ENSMICG00000029477-100100.000Microcebus_murinus
ENSG00000134108ARL8B9687.151ENSMICG00000028928-9987.151Microcebus_murinus
ENSG00000134108ARL8B100100.000ENSMOCG00000018769Arl8b100100.000Microtus_ochrogaster
ENSG00000134108ARL8B8998.193ENSMMOG00000010994arl8bb10098.193Mola_mola
ENSG00000134108ARL8B8995.783ENSMMOG00000011045arl8ba10095.783Mola_mola
ENSG00000134108ARL8B10098.387ENSMALG00000008164arl8bb10098.387Monopterus_albus
ENSG00000134108ARL8B10096.237ENSMALG00000001217arl8ba10096.237Monopterus_albus
ENSG00000134108ARL8B100100.000MGP_CAROLIEiJ_G0028705Arl8b100100.000Mus_caroli
ENSG00000134108ARL8B100100.000ENSMUSG00000030105Arl8b100100.000Mus_musculus
ENSG00000134108ARL8B100100.000MGP_PahariEiJ_G0022456Arl8b100100.000Mus_pahari
ENSG00000134108ARL8B100100.000MGP_SPRETEiJ_G0029733Arl8b100100.000Mus_spretus
ENSG00000134108ARL8B100100.000ENSNGAG00000012594Arl8b100100.000Nannospalax_galili
ENSG00000134108ARL8B10096.237ENSNBRG00000018737arl8ba10096.237Neolamprologus_brichardi
ENSG00000134108ARL8B10098.387ENSNBRG00000023542arl8bb10098.387Neolamprologus_brichardi
ENSG00000134108ARL8B100100.000ENSNLEG00000034641ARL8B100100.000Nomascus_leucogenys
ENSG00000134108ARL8B100100.000ENSOPRG00000003294ARL8B100100.000Ochotona_princeps
ENSG00000134108ARL8B100100.000ENSODEG00000009293ARL8B100100.000Octodon_degus
ENSG00000134108ARL8B10098.387ENSONIG00000020279arl8bb10098.387Oreochromis_niloticus
ENSG00000134108ARL8B10096.237ENSONIG00000004057arl8ba10096.237Oreochromis_niloticus
ENSG00000134108ARL8B10096.774ENSORLG00000012782arl8bb10096.774Oryzias_latipes
ENSG00000134108ARL8B10095.161ENSORLG00000027941arl8ba10095.161Oryzias_latipes
ENSG00000134108ARL8B10096.774ENSORLG00020002055arl8bb10096.774Oryzias_latipes_hni
ENSG00000134108ARL8B10095.161ENSORLG00020021398arl8ba10095.161Oryzias_latipes_hni
ENSG00000134108ARL8B10094.086ENSORLG00015017615arl8ba10094.086Oryzias_latipes_hsok
ENSG00000134108ARL8B10096.774ENSORLG00015018436arl8bb10096.774Oryzias_latipes_hsok
ENSG00000134108ARL8B10095.161ENSOMEG00000001959arl8ba10095.161Oryzias_melastigma
ENSG00000134108ARL8B10097.312ENSOMEG00000023857arl8bb10097.312Oryzias_melastigma
ENSG00000134108ARL8B100100.000ENSOGAG00000026863ARL8B76100.000Otolemur_garnettii
ENSG00000134108ARL8B95100.000ENSOARG00000007805ARL8B100100.000Ovis_aries
ENSG00000134108ARL8B100100.000ENSPPAG00000043156ARL8B100100.000Pan_paniscus
ENSG00000134108ARL8B100100.000ENSPPRG00000022808ARL8B100100.000Panthera_pardus
ENSG00000134108ARL8B100100.000ENSPTRG00000014572ARL8B100100.000Pan_troglodytes
ENSG00000134108ARL8B100100.000ENSPANG00000009815ARL8B100100.000Papio_anubis
ENSG00000134108ARL8B10097.312ENSPKIG00000025083arl8ba10097.312Paramormyrops_kingsleyae
ENSG00000134108ARL8B10097.849ENSPKIG00000019809arl8bb6997.849Paramormyrops_kingsleyae
ENSG00000134108ARL8B10097.312ENSPMGG00000017975arl8ba10097.312Periophthalmus_magnuspinnatus
ENSG00000134108ARL8B8997.590ENSPMGG00000021129arl8bb10097.590Periophthalmus_magnuspinnatus
ENSG00000134108ARL8B10090.860ENSPMAG00000007507arl8ba10090.860Petromyzon_marinus
ENSG00000134108ARL8B10099.462ENSPCIG00000028258ARL8B10099.462Phascolarctos_cinereus
ENSG00000134108ARL8B10097.312ENSPFOG00000016361arl8ba10097.312Poecilia_formosa
ENSG00000134108ARL8B10097.312ENSPFOG00000003916arl8bb10097.312Poecilia_formosa
ENSG00000134108ARL8B10097.312ENSPLAG00000007941-10097.312Poecilia_latipinna
ENSG00000134108ARL8B10097.312ENSPLAG00000020975arl8ba10097.312Poecilia_latipinna
ENSG00000134108ARL8B10097.312ENSPMEG00000004015arl8bb10097.312Poecilia_mexicana
ENSG00000134108ARL8B10097.312ENSPMEG00000009058arl8ba10097.312Poecilia_mexicana
ENSG00000134108ARL8B10096.774ENSPREG00000004191arl8ba10096.774Poecilia_reticulata
ENSG00000134108ARL8B10097.312ENSPREG00000021315arl8bb10097.312Poecilia_reticulata
ENSG00000134108ARL8B10099.462ENSPPYG00000013694ARL8B10099.462Pongo_abelii
ENSG00000134108ARL8B100100.000ENSPCOG00000013027ARL8B100100.000Propithecus_coquereli
ENSG00000134108ARL8B100100.000ENSPVAG00000015922ARL8B100100.000Pteropus_vampyrus
ENSG00000134108ARL8B10098.387ENSPNYG00000015445arl8bb10098.387Pundamilia_nyererei
ENSG00000134108ARL8B10096.237ENSPNYG00000016248arl8ba10096.237Pundamilia_nyererei
ENSG00000134108ARL8B10095.699ENSPNAG00000007931arl8ba10095.699Pygocentrus_nattereri
ENSG00000134108ARL8B10096.237ENSPNAG00000017354arl8bb10096.237Pygocentrus_nattereri
ENSG00000134108ARL8B100100.000ENSRNOG00000055860Arl8b100100.000Rattus_norvegicus
ENSG00000134108ARL8B100100.000ENSRBIG00000040961ARL8B100100.000Rhinopithecus_bieti
ENSG00000134108ARL8B100100.000ENSRROG00000010772ARL8B100100.000Rhinopithecus_roxellana
ENSG00000134108ARL8B100100.000ENSSBOG00000032344ARL8B100100.000Saimiri_boliviensis_boliviensis
ENSG00000134108ARL8B10098.387ENSSFOG00015020131arl8bb10098.387Scleropages_formosus
ENSG00000134108ARL8B10097.312ENSSFOG00015019411arl8ba10097.312Scleropages_formosus
ENSG00000134108ARL8B10096.774ENSSMAG00000015130arl8bb10096.774Scophthalmus_maximus
ENSG00000134108ARL8B10095.699ENSSMAG00000016740arl8ba10095.699Scophthalmus_maximus
ENSG00000134108ARL8B10096.774ENSSDUG00000021055arl8ba8496.774Seriola_dumerili
ENSG00000134108ARL8B10097.849ENSSDUG00000012529arl8bb10097.849Seriola_dumerili
ENSG00000134108ARL8B10097.849ENSSLDG00000009588arl8bb10097.849Seriola_lalandi_dorsalis
ENSG00000134108ARL8B9196.471ENSSLDG00000001636-6596.471Seriola_lalandi_dorsalis
ENSG00000134108ARL8B10096.237ENSSPAG00000005746arl8ba10096.237Stegastes_partitus
ENSG00000134108ARL8B9197.647ENSSPAG00000020792arl8bb10098.193Stegastes_partitus
ENSG00000134108ARL8B10099.462ENSSSCG00000011535-10099.462Sus_scrofa
ENSG00000134108ARL8B10094.086ENSTRUG00000023169arl8ba10094.086Takifugu_rubripes
ENSG00000134108ARL8B10097.312ENSTRUG00000011496arl8bb10097.312Takifugu_rubripes
ENSG00000134108ARL8B10097.312ENSTNIG00000007336arl8bb10097.312Tetraodon_nigroviridis
ENSG00000134108ARL8B10095.161ENSTNIG00000014751arl8ba10095.161Tetraodon_nigroviridis
ENSG00000134108ARL8B10099.462ENSUMAG00000019574ARL8B10099.462Ursus_maritimus
ENSG00000134108ARL8B100100.000ENSVVUG00000009760ARL8B100100.000Vulpes_vulpes
ENSG00000134108ARL8B10096.237ENSXETG00000005212arl8b10096.237Xenopus_tropicalis
ENSG00000134108ARL8B10097.312ENSXCOG00000004543arl8bb10097.312Xiphophorus_couchianus
ENSG00000134108ARL8B8997.590ENSXCOG00000013402arl8ba10097.590Xiphophorus_couchianus
ENSG00000134108ARL8B10097.312ENSXMAG00000016669arl8ba10097.312Xiphophorus_maculatus
ENSG00000134108ARL8B10097.312ENSXMAG00000008092arl8bb10097.312Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003924GTPase activity15331635.NASFunction
GO:0005515protein binding25898167.IPIFunction
GO:0005525GTP binding15331635.IDAFunction
GO:0005737cytoplasm15331635.IDAComponent
GO:0005765lysosomal membrane21873635.IBAComponent
GO:0005765lysosomal membrane25898167.IDAComponent
GO:0005774vacuolar membrane21873635.IBAComponent
GO:0007049cell cycle-IEAProcess
GO:0007059chromosome segregation14871887.IMPProcess
GO:0008089anterograde axonal transport-IEAProcess
GO:0015031protein transport-IEAProcess
GO:0016020membrane19946888.HDAComponent
GO:0019003GDP binding15331635.IDAFunction
GO:0030054cell junction-IEAComponent
GO:0030496midbody15331635.IDAComponent
GO:0031902late endosome membrane-IEAComponent
GO:0032418lysosome localization25898167.IMPProcess
GO:0043014alpha-tubulin binding15331635.IDAFunction
GO:0045202synapse-IEAComponent
GO:0048487beta-tubulin binding15331635.IDAFunction
GO:0051233spindle midzone15331635.IDAComponent
GO:0051301cell division-IEAProcess
GO:0070062extracellular exosome19056867.HDAComponent
GO:1904115axon cytoplasm-IEAComponent

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us