EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000134597 (Gene tree)
Gene ID: 51634
Gene Symbol: RBMX2
Alias: CGI-79|Snu17
Full Name: RNA binding motif protein X-linked 2
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 11,375 bases
Position: chrX:130,401,969-130,413,343
Accession: 24282
RBP type: canonical RBP
Summary: (RNA Binding Motif Protein X-Linked 2) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is CSTF2.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000491200	RRM_1	PF00076.22	2.2e-19	1	1
ENSP00000339090	RRM_1	PF00076.22	2.8e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000370947	RBMX2-202	798	-	ENSP00000359985	58 (aa)	-	Q5JY83
ENST00000639890	RBMX2-205	871	-	ENSP00000491200	276 (aa)	-	A0A1W2PP04
ENST00000469953	RBMX2-203	729	-	-	- (aa)	-	-
ENST00000487274	RBMX2-204	358	-	-	- (aa)	-	-
ENST00000305536	RBMX2-201	1528	-	ENSP00000339090	322 (aa)	-	Q9Y388

Gene Model

Click here to download ENSG00000134597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000134597's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000134597	RBMX2	97	85.714	ENSAPOG00000018578	rbmx2	51	84.783	Acanthochromis_polyacanthus
ENSG00000134597	RBMX2	98	98.246	ENSAMEG00000014865	RBMX2	99	81.459	Ailuropoda_melanoleuca
ENSG00000134597	RBMX2	100	100.000	ENSANAG00000032814	RBMX2	100	94.099	Aotus_nancymaae
ENSG00000134597	RBMX2	98	58.559	ENSBTAG00000006252	-	98	58.519	Bos_taurus
ENSG00000134597	RBMX2	100	94.828	ENSBTAG00000014771	RBMX2	81	78.201	Bos_taurus
ENSG00000134597	RBMX2	100	94.828	ENSBTAG00000055095	-	88	77.509	Bos_taurus
ENSG00000134597	RBMX2	100	100.000	ENSCJAG00000002436	RBMX2	100	92.547	Callithrix_jacchus
ENSG00000134597	RBMX2	100	100.000	ENSCAFG00000018770	RBMX2	100	79.141	Canis_familiaris
ENSG00000134597	RBMX2	98	98.246	ENSCAFG00020001063	RBMX2	100	75.882	Canis_lupus_dingo
ENSG00000134597	RBMX2	100	93.103	ENSCHIG00000015832	-	83	79.668	Capra_hircus
ENSG00000134597	RBMX2	98	91.228	ENSCHIG00000024429	-	99	71.118	Capra_hircus
ENSG00000134597	RBMX2	98	94.737	ENSCHIG00000000167	-	98	81.022	Capra_hircus
ENSG00000134597	RBMX2	100	100.000	ENSTSYG00000010611	RBMX2	100	86.296	Carlito_syrichta
ENSG00000134597	RBMX2	100	96.552	ENSCPOG00000032744	RBMX2	86	76.471	Cavia_porcellus
ENSG00000134597	RBMX2	100	86.207	ENSCCAG00000024017	-	96	88.519	Cebus_capucinus
ENSG00000134597	RBMX2	100	98.276	ENSCCAG00000026471	-	100	88.820	Cebus_capucinus
ENSG00000134597	RBMX2	100	86.207	ENSCCAG00000033009	-	95	86.716	Cebus_capucinus
ENSG00000134597	RBMX2	99	74.818	ENSCATG00000033320	-	98	76.296	Cercocebus_atys
ENSG00000134597	RBMX2	100	93.103	ENSCATG00000030668	-	94	84.698	Cercocebus_atys
ENSG00000134597	RBMX2	100	100.000	ENSCATG00000005967	RBMX2	100	97.516	Cercocebus_atys
ENSG00000134597	RBMX2	100	96.552	ENSCLAG00000001141	RBMX2	88	77.352	Chinchilla_lanigera
ENSG00000134597	RBMX2	98	98.246	ENSCSAG00000007947	RBMX2	100	96.296	Chlorocebus_sabaeus
ENSG00000134597	RBMX2	100	93.103	ENSCANG00000040265	-	100	81.988	Colobus_angolensis_palliatus
ENSG00000134597	RBMX2	100	100.000	ENSCANG00000032597	RBMX2	100	98.137	Colobus_angolensis_palliatus
ENSG00000134597	RBMX2	100	96.552	ENSCGRG00001019209	Rbmx2	80	77.855	Cricetulus_griseus_chok1gshd
ENSG00000134597	RBMX2	88	70.000	ENSCGRG00000015474	Rbmx2	86	73.171	Cricetulus_griseus_crigri
ENSG00000134597	RBMX2	98	98.246	ENSDNOG00000037391	RBMX2	83	81.533	Dasypus_novemcinctus
ENSG00000134597	RBMX2	100	62.069	FBgn0032822	CG10466	89	65.468	Drosophila_melanogaster
ENSG00000134597	RBMX2	98	94.737	ENSETEG00000001763	RBMX2	77	75.000	Echinops_telfairi
ENSG00000134597	RBMX2	100	100.000	ENSEASG00005004412	RBMX2	100	84.098	Equus_asinus_asinus
ENSG00000134597	RBMX2	100	100.000	ENSECAG00000008257	RBMX2	100	84.098	Equus_caballus
ENSG00000134597	RBMX2	83	58.696	ENSEEUG00000000839	-	86	58.621	Erinaceus_europaeus
ENSG00000134597	RBMX2	100	100.000	ENSFCAG00000044242	RBMX2	100	83.180	Felis_catus
ENSG00000134597	RBMX2	100	96.552	ENSFDAG00000007597	RBMX2	100	80.480	Fukomys_damarensis
ENSG00000134597	RBMX2	98	82.456	ENSGMOG00000000253	rbmx2	64	82.014	Gadus_morhua
ENSG00000134597	RBMX2	84	44.689	ENSGALG00000051206	-	58	59.333	Gallus_gallus
ENSG00000134597	RBMX2	100	81.034	ENSGACG00000001855	rbmx2	64	80.576	Gasterosteus_aculeatus
ENSG00000134597	RBMX2	100	100.000	ENSGGOG00000023687	RBMX2	100	97.826	Gorilla_gorilla
ENSG00000134597	RBMX2	100	91.379	ENSGGOG00000016146	-	100	81.988	Gorilla_gorilla
ENSG00000134597	RBMX2	100	98.276	ENSGGOG00000026106	-	91	84.559	Gorilla_gorilla
ENSG00000134597	RBMX2	100	96.552	ENSHGLG00000008080	RBMX2	88	83.471	Heterocephalus_glaber_female
ENSG00000134597	RBMX2	100	96.552	ENSHGLG00100002516	RBMX2	100	79.511	Heterocephalus_glaber_male
ENSG00000134597	RBMX2	100	79.310	ENSHCOG00000011875	rbmx2	51	86.029	Hippocampus_comes
ENSG00000134597	RBMX2	100	84.483	ENSIPUG00000007230	rbmx2	87	58.042	Ictalurus_punctatus
ENSG00000134597	RBMX2	100	96.552	ENSSTOG00000015391	RBMX2	93	83.088	Ictidomys_tridecemlineatus
ENSG00000134597	RBMX2	100	98.276	ENSJJAG00000019621	Rbmx2	87	76.573	Jaculus_jaculus
ENSG00000134597	RBMX2	100	72.414	ENSLAFG00000028277	-	84	59.322	Loxodonta_africana
ENSG00000134597	RBMX2	98	96.491	ENSLAFG00000017625	RBMX2	99	79.027	Loxodonta_africana
ENSG00000134597	RBMX2	100	100.000	ENSMFAG00000041017	RBMX2	100	97.205	Macaca_fascicularis
ENSG00000134597	RBMX2	100	94.828	ENSMFAG00000024381	-	95	85.816	Macaca_fascicularis
ENSG00000134597	RBMX2	100	94.828	ENSMMUG00000020845	-	100	84.161	Macaca_mulatta
ENSG00000134597	RBMX2	100	100.000	ENSMMUG00000008389	RBMX2	100	97.205	Macaca_mulatta
ENSG00000134597	RBMX2	100	100.000	ENSMNEG00000030574	RBMX2	100	97.205	Macaca_nemestrina
ENSG00000134597	RBMX2	100	94.828	ENSMNEG00000043833	-	86	84.681	Macaca_nemestrina
ENSG00000134597	RBMX2	99	66.788	ENSMNEG00000028264	-	99	68.613	Macaca_nemestrina
ENSG00000134597	RBMX2	100	100.000	ENSMLEG00000028723	RBMX2	100	97.826	Mandrillus_leucophaeus
ENSG00000134597	RBMX2	100	94.828	ENSMLEG00000005751	-	100	83.230	Mandrillus_leucophaeus
ENSG00000134597	RBMX2	100	98.276	ENSMAUG00000019202	Rbmx2	86	79.931	Mesocricetus_auratus
ENSG00000134597	RBMX2	100	100.000	ENSMICG00000015139	RBMX2	100	85.015	Microcebus_murinus
ENSG00000134597	RBMX2	100	82.759	ENSMOCG00000000487	-	92	89.706	Microtus_ochrogaster
ENSG00000134597	RBMX2	98	89.474	ENSMODG00000012002	-	58	84.967	Monodelphis_domestica
ENSG00000134597	RBMX2	100	63.793	ENSMODG00000011981	-	86	70.714	Monodelphis_domestica
ENSG00000134597	RBMX2	100	94.828	MGP_CAROLIEiJ_G0033048	Rbmx2	88	77.778	Mus_caroli
ENSG00000134597	RBMX2	100	94.828	ENSMUSG00000031107	Rbmx2	87	73.171	Mus_musculus
ENSG00000134597	RBMX2	100	77.465	MGP_PahariEiJ_G0031593	-	88	74.751	Mus_pahari
ENSG00000134597	RBMX2	100	100.000	ENSMPUG00000002006	RBMX2	100	80.303	Mustela_putorius_furo
ENSG00000134597	RBMX2	100	86.207	ENSMLUG00000023163	-	89	79.355	Myotis_lucifugus
ENSG00000134597	RBMX2	100	96.552	ENSMLUG00000010298	-	86	80.139	Myotis_lucifugus
ENSG00000134597	RBMX2	98	96.491	ENSMLUG00000017095	-	86	79.514	Myotis_lucifugus
ENSG00000134597	RBMX2	97	96.429	ENSNGAG00000020108	Rbmx2	87	83.158	Nannospalax_galili
ENSG00000134597	RBMX2	100	96.552	ENSNLEG00000033746	-	97	81.550	Nomascus_leucogenys
ENSG00000134597	RBMX2	100	100.000	ENSNLEG00000015325	RBMX2	100	98.447	Nomascus_leucogenys
ENSG00000134597	RBMX2	100	96.552	ENSODEG00000012495	RBMX2	97	75.352	Octodon_degus
ENSG00000134597	RBMX2	100	75.862	ENSOCUG00000020937	-	80	80.000	Oryctolagus_cuniculus
ENSG00000134597	RBMX2	98	94.737	ENSOCUG00000011809	RBMX2	88	77.586	Oryctolagus_cuniculus
ENSG00000134597	RBMX2	100	81.034	ENSOMEG00000013873	RBMX2	90	73.770	Oryzias_melastigma
ENSG00000134597	RBMX2	100	100.000	ENSOGAG00000006237	-	98	80.685	Otolemur_garnettii
ENSG00000134597	RBMX2	100	96.552	ENSOARG00000017320	-	93	78.621	Ovis_aries
ENSG00000134597	RBMX2	84	64.189	ENSOARG00000000959	-	78	74.236	Ovis_aries
ENSG00000134597	RBMX2	100	100.000	ENSPPAG00000027227	-	100	74.534	Pan_paniscus
ENSG00000134597	RBMX2	100	94.828	ENSPPAG00000028959	-	95	79.710	Pan_paniscus
ENSG00000134597	RBMX2	100	100.000	ENSPPAG00000042194	RBMX2	100	98.137	Pan_paniscus
ENSG00000134597	RBMX2	100	100.000	ENSPPRG00000000601	RBMX2	100	83.486	Panthera_pardus
ENSG00000134597	RBMX2	100	100.000	ENSPTIG00000005563	RBMX2	100	83.486	Panthera_tigris_altaica
ENSG00000134597	RBMX2	100	94.828	ENSPTRG00000042769	-	91	84.342	Pan_troglodytes
ENSG00000134597	RBMX2	100	100.000	ENSPTRG00000022269	RBMX2	100	99.379	Pan_troglodytes
ENSG00000134597	RBMX2	100	100.000	ENSPANG00000021545	RBMX2	100	97.516	Papio_anubis
ENSG00000134597	RBMX2	100	94.828	ENSPANG00000006608	-	97	85.609	Papio_anubis
ENSG00000134597	RBMX2	100	79.310	ENSPKIG00000008614	-	92	67.939	Paramormyrops_kingsleyae
ENSG00000134597	RBMX2	100	98.276	ENSPEMG00000015660	Rbmx2	88	78.893	Peromyscus_maniculatus_bairdii
ENSG00000134597	RBMX2	100	86.207	ENSPCIG00000013378	-	90	84.173	Phascolarctos_cinereus
ENSG00000134597	RBMX2	87	96.441	ENSPPYG00000020717	RBMX2	100	96.441	Pongo_abelii
ENSG00000134597	RBMX2	87	71.429	ENSPCAG00000012903	RBMX2	85	70.383	Procavia_capensis
ENSG00000134597	RBMX2	100	100.000	ENSPCOG00000026182	RBMX2	100	84.404	Propithecus_coquereli
ENSG00000134597	RBMX2	100	100.000	ENSPVAG00000004425	RBMX2	85	81.533	Pteropus_vampyrus
ENSG00000134597	RBMX2	100	98.276	ENSRNOG00000007371	Rbmx2	87	75.958	Rattus_norvegicus
ENSG00000134597	RBMX2	100	93.103	ENSRBIG00000037215	-	100	83.230	Rhinopithecus_bieti
ENSG00000134597	RBMX2	100	100.000	ENSRBIG00000043718	RBMX2	100	96.584	Rhinopithecus_bieti
ENSG00000134597	RBMX2	100	100.000	ENSRROG00000044360	RBMX2	100	96.894	Rhinopithecus_roxellana
ENSG00000134597	RBMX2	100	93.103	ENSRROG00000042238	-	100	82.919	Rhinopithecus_roxellana
ENSG00000134597	RBMX2	84	52.000	YIR005W	IST3	75	56.637	Saccharomyces_cerevisiae
ENSG00000134597	RBMX2	100	100.000	ENSSBOG00000023007	RBMX2	100	91.925	Saimiri_boliviensis_boliviensis
ENSG00000134597	RBMX2	100	81.034	ENSSHAG00000002122	-	56	82.353	Sarcophilus_harrisii
ENSG00000134597	RBMX2	83	53.430	ENSSHAG00000016412	-	85	56.962	Sarcophilus_harrisii
ENSG00000134597	RBMX2	98	91.228	ENSSARG00000007350	RBMX2	80	76.727	Sorex_araneus
ENSG00000134597	RBMX2	100	98.276	ENSSSCG00000032739	RBMX2	96	82.154	Sus_scrofa
ENSG00000134597	RBMX2	67	82.051	ENSTRUG00000001699	rbmx2	61	62.500	Takifugu_rubripes
ENSG00000134597	RBMX2	98	80.702	ENSTNIG00000007672	rbmx2	87	85.294	Tetraodon_nigroviridis
ENSG00000134597	RBMX2	100	98.276	ENSTTRG00000016210	RBMX2	97	81.957	Tursiops_truncatus
ENSG00000134597	RBMX2	98	98.246	ENSUAMG00000000911	RBMX2	88	84.000	Ursus_americanus
ENSG00000134597	RBMX2	100	100.000	ENSVVUG00000009059	RBMX2	100	77.843	Vulpes_vulpes
ENSG00000134597	RBMX2	98	80.702	ENSXETG00000009623	rbmx2	57	77.778	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000384	first spliceosomal transesterification activity	21873635.	IBA	Function
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	29360106.	IDA	Process
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0005515	protein binding	22365833.	IPI	Function
GO:0005634	nucleus	29360106.	IDA	Component
GO:0005686	U2 snRNP	21873635.	IBA	Component
GO:0071005	U2-type precatalytic spliceosome	29360106.	IDA	Component