EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000134697 (Gene tree)
Gene ID
29889
Gene Symbol
GNL2
Alias
Ngp-1|HUMAUANTIG|Nog2|Nug2
Full Name
G protein nucleolar 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
29,174 bases
Position
chr1:37,566,812-37,595,985
Accession
29925
RBP type
canonical RBP
Summary
(G Protein Nucleolar 2) is a Protein Coding gene. Diseases associated with GNL2 include Noonan Syndrome 2 and Noonan Syndrome 1. Among its related pathways are Ribosome biogenesis in eukaryotes. Gene Ontology (GO) annotations related to this gene include GTPase activity. An important paralog of this gene is GNL3L.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000362153MMR_HSR1PF01926.231.1e-1411
ENSP00000441288MMR_HSR1PF01926.233e-1311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000463351GNL2-203493--- (aa)--
ENST00000490029GNL2-208635--- (aa)--
ENST00000462812GNL2-2022409--- (aa)--
ENST00000373062GNL2-2012334XM_024446591ENSP00000362153731 (aa)XP_024302359Q13823
ENST00000479255GNL2-205422--- (aa)--
ENST00000469191GNL2-204533--- (aa)--
ENST00000488496GNL2-206539--- (aa)--
ENST00000489146GNL2-207630--- (aa)--
ENST00000538069GNL2-209698-ENSP00000441288233 (aa)-H0YG10
Gene Model
Click here to download ENSG00000134697's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000134697Insulin-Like Growth Factor Binding Protein 31.2640000E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000134697rs2294875137586844?Lung function (FEV1/FVC)30595370EFO_0004713
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000134697's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000134697GNL29930.000ENSG00000163938GNL35333.677
ENSG00000134697GNL29931.602ENSG00000130119GNL3L5633.234
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000134697GNL29979.000ENSAPOG00000024507gnl29967.824Acanthochromis_polyacanthus
ENSG00000134697GNL299100.000ENSAMEG00000001032GNL210088.283Ailuropoda_melanoleuca
ENSG00000134697GNL29979.000ENSACIG00000018346gnl29865.323Amphilophus_citrinellus
ENSG00000134697GNL29979.000ENSAOCG00000014396gnl29967.423Amphiprion_ocellaris
ENSG00000134697GNL29979.000ENSAPEG00000005375gnl29967.423Amphiprion_percula
ENSG00000134697GNL29977.000ENSATEG00000009311gnl29965.323Anabas_testudineus
ENSG00000134697GNL210076.022ENSAPLG00000006508GNL210075.886Anas_platyrhynchos
ENSG00000134697GNL210069.388ENSACAG00000017224GNL210070.161Anolis_carolinensis
ENSG00000134697GNL299100.000ENSANAG00000023449GNL210096.443Aotus_nancymaae
ENSG00000134697GNL28091.860ENSAMXG00000020288gnl29965.359Astyanax_mexicanus
ENSG00000134697GNL29998.837ENSBTAG00000003849GNL210087.193Bos_taurus
ENSG00000134697GNL27073.256WBGene00003596ngp-18852.390Caenorhabditis_elegans
ENSG00000134697GNL299100.000ENSCJAG00000001980GNL210095.879Callithrix_jacchus
ENSG00000134697GNL29998.837ENSCAFG00000003289GNL210086.531Canis_familiaris
ENSG00000134697GNL299100.000ENSCAFG00020008050GNL210086.803Canis_lupus_dingo
ENSG00000134697GNL299100.000ENSCHIG00000015731GNL210087.466Capra_hircus
ENSG00000134697GNL29998.837ENSTSYG00000004537GNL210090.834Carlito_syrichta
ENSG00000134697GNL29776.676ENSCAPG00000017481GNL210076.676Cavia_aperea
ENSG00000134697GNL29998.837ENSCPOG00000026804GNL210087.482Cavia_porcellus
ENSG00000134697GNL299100.000ENSCCAG00000034952GNL210096.027Cebus_capucinus
ENSG00000134697GNL29998.837ENSCATG00000026503GNL210097.264Cercocebus_atys
ENSG00000134697GNL29998.837ENSCLAG00000012504GNL210088.677Chinchilla_lanigera
ENSG00000134697GNL299100.000ENSCSAG00000001110GNL210097.811Chlorocebus_sabaeus
ENSG00000134697GNL27497.959ENSCHOG00000009509GNL27397.959Choloepus_hoffmanni
ENSG00000134697GNL210078.261ENSCPBG00000018483GNL210077.989Chrysemys_picta_bellii
ENSG00000134697GNL27479.070ENSCING00000010696-9958.244Ciona_intestinalis
ENSG00000134697GNL29746.229ENSCSAVG00000001583-9945.694Ciona_savignyi
ENSG00000134697GNL299100.000ENSCANG00000036748GNL210094.391Colobus_angolensis_palliatus
ENSG00000134697GNL29997.674ENSCGRG00001016733Gnl210086.357Cricetulus_griseus_chok1gshd
ENSG00000134697GNL29997.674ENSCGRG00000017418Gnl210086.357Cricetulus_griseus_crigri
ENSG00000134697GNL29987.209ENSCSEG00000020296gnl29967.560Cynoglossus_semilaevis
ENSG00000134697GNL29978.000ENSCVAG00000017712gnl29963.465Cyprinodon_variegatus
ENSG00000134697GNL29987.209ENSDARG00000098080gnl210091.111Danio_rerio
ENSG00000134697GNL29995.349ENSDNOG00000033314-10087.858Dasypus_novemcinctus
ENSG00000134697GNL29996.512ENSDNOG00000016466-10088.556Dasypus_novemcinctus
ENSG00000134697GNL29997.674ENSDORG00000014429Gnl210082.297Dipodomys_ordii
ENSG00000134697GNL27785.897FBgn0034243Ns29848.199Drosophila_melanogaster
ENSG00000134697GNL28885.000ENSETEG00000016674GNL210081.789Echinops_telfairi
ENSG00000134697GNL28083.721ENSEBUG00000005300gnl29960.552Eptatretus_burgeri
ENSG00000134697GNL29998.837ENSEASG00005012227GNL210089.237Equus_asinus_asinus
ENSG00000134697GNL29998.837ENSECAG00000008068GNL210089.373Equus_caballus
ENSG00000134697GNL29981.881ENSEEUG00000011345GNL29981.328Erinaceus_europaeus
ENSG00000134697GNL29976.000ENSELUG00000000675gnl29963.922Esox_lucius
ENSG00000134697GNL299100.000ENSFCAG00000008760GNL210088.509Felis_catus
ENSG00000134697GNL210073.954ENSFALG00000000909GNL210074.528Ficedula_albicollis
ENSG00000134697GNL29996.512ENSFDAG00000013274GNL210087.027Fukomys_damarensis
ENSG00000134697GNL28091.860ENSFHEG00000022857gnl29960.291Fundulus_heteroclitus
ENSG00000134697GNL28091.860ENSGMOG00000004427gnl29962.195Gadus_morhua
ENSG00000134697GNL210075.272ENSGALG00000001973GNL29275.272Gallus_gallus
ENSG00000134697GNL29979.000ENSGAFG00000008794gnl29867.168Gambusia_affinis
ENSG00000134697GNL29382.558ENSGACG00000013692gnl29775.292Gasterosteus_aculeatus
ENSG00000134697GNL29961.207ENSGAGG00000003905GNL210074.803Gopherus_agassizii
ENSG00000134697GNL210099.179ENSGGOG00000007704GNL210099.179Gorilla_gorilla
ENSG00000134697GNL29997.674ENSHGLG00000013728GNL210088.798Heterocephalus_glaber_female
ENSG00000134697GNL210072.033ENSHGLG00000007433-10072.306Heterocephalus_glaber_female
ENSG00000134697GNL29997.674ENSHGLG00100002593GNL210088.798Heterocephalus_glaber_male
ENSG00000134697GNL210072.033ENSHGLG00100001365-10072.306Heterocephalus_glaber_male
ENSG00000134697GNL28588.889ENSHGLG00100016036-9588.889Heterocephalus_glaber_male
ENSG00000134697GNL28091.860ENSHCOG00000012109gnl29961.879Hippocampus_comes
ENSG00000134697GNL29980.000ENSIPUG00000017079gnl29967.116Ictalurus_punctatus
ENSG00000134697GNL29998.837ENSSTOG00000005217GNL210088.540Ictidomys_tridecemlineatus
ENSG00000134697GNL29997.674ENSJJAG00000010798Gnl210086.183Jaculus_jaculus
ENSG00000134697GNL29987.209ENSKMAG00000018855gnl29966.045Kryptolebias_marmoratus
ENSG00000134697GNL29976.000ENSLBEG00000008518gnl29966.667Labrus_bergylta
ENSG00000134697GNL29872.764ENSLACG00000016998GNL210073.585Latimeria_chalumnae
ENSG00000134697GNL29997.674ENSLAFG00000018723GNL29988.356Loxodonta_africana
ENSG00000134697GNL299100.000ENSMFAG00000039033GNL210097.811Macaca_fascicularis
ENSG00000134697GNL299100.000ENSMMUG00000008419GNL210097.948Macaca_mulatta
ENSG00000134697GNL299100.000ENSMNEG00000043438GNL210097.538Macaca_nemestrina
ENSG00000134697GNL299100.000ENSMLEG00000044421GNL210094.126Mandrillus_leucophaeus
ENSG00000134697GNL29978.000ENSMAMG00000007823gnl29967.604Mastacembelus_armatus
ENSG00000134697GNL28089.535ENSMZEG00005008412GNL27974.234Maylandia_zebra
ENSG00000134697GNL28089.535ENSMZEG00005007393gnl29964.286Maylandia_zebra
ENSG00000134697GNL210069.459ENSMGAG00000003267GNL210069.324Meleagris_gallopavo
ENSG00000134697GNL29997.674ENSMAUG00000018529Gnl210085.812Mesocricetus_auratus
ENSG00000134697GNL28695.607ENSMOCG00000016365Gnl29695.607Microtus_ochrogaster
ENSG00000134697GNL29979.000ENSMMOG00000018551gnl210065.259Mola_mola
ENSG00000134697GNL299100.000ENSMODG00000017773GNL210079.891Monodelphis_domestica
ENSG00000134697GNL28090.698ENSMALG00000011736gnl29867.667Monopterus_albus
ENSG00000134697GNL210085.675MGP_CAROLIEiJ_G0026458Gnl210084.836Mus_caroli
ENSG00000134697GNL29998.837ENSMUSG00000028869Gnl210085.363Mus_musculus
ENSG00000134697GNL29998.837MGP_PahariEiJ_G0028789Gnl210085.089Mus_pahari
ENSG00000134697GNL29998.837MGP_SPRETEiJ_G0027437Gnl210085.363Mus_spretus
ENSG00000134697GNL29998.837ENSMPUG00000014709GNL210088.283Mustela_putorius_furo
ENSG00000134697GNL299100.000ENSMLUG00000017139GNL210088.211Myotis_lucifugus
ENSG00000134697GNL210087.228ENSNGAG00000005990Gnl210086.667Nannospalax_galili
ENSG00000134697GNL28089.535ENSNBRG00000010291gnl29966.578Neolamprologus_brichardi
ENSG00000134697GNL299100.000ENSNLEG00000011599GNL210098.906Nomascus_leucogenys
ENSG00000134697GNL29171.940ENSMEUG00000015141GNL29971.749Notamacropus_eugenii
ENSG00000134697GNL299100.000ENSOPRG00000002625GNL210072.888Ochotona_princeps
ENSG00000134697GNL29997.674ENSOANG00000002057GNL29975.267Ornithorhynchus_anatinus
ENSG00000134697GNL299100.000ENSOCUG00000010877GNL210085.115Oryctolagus_cuniculus
ENSG00000134697GNL29988.372ENSORLG00000014645gnl29967.215Oryzias_latipes
ENSG00000134697GNL29988.372ENSORLG00020018867gnl29965.613Oryzias_latipes_hni
ENSG00000134697GNL29988.372ENSORLG00015003936gnl29965.831Oryzias_latipes_hsok
ENSG00000134697GNL29979.000ENSOMEG00000019611gnl29967.513Oryzias_melastigma
ENSG00000134697GNL29998.837ENSOGAG00000008643GNL210083.333Otolemur_garnettii
ENSG00000134697GNL299100.000ENSOARG00000019788GNL210086.821Ovis_aries
ENSG00000134697GNL210099.590ENSPPAG00000001559GNL29299.590Pan_paniscus
ENSG00000134697GNL299100.000ENSPPRG00000010528GNL210088.372Panthera_pardus
ENSG00000134697GNL299100.000ENSPTIG00000015095GNL210088.509Panthera_tigris_altaica
ENSG00000134697GNL210099.316ENSPTRG00000000549GNL210099.316Pan_troglodytes
ENSG00000134697GNL299100.000ENSPANG00000025285GNL210097.948Papio_anubis
ENSG00000134697GNL29976.000ENSPKIG00000005438gnl210065.897Paramormyrops_kingsleyae
ENSG00000134697GNL29776.934ENSPSIG00000007800GNL210077.918Pelodiscus_sinensis
ENSG00000134697GNL29979.000ENSPMGG00000002306gnl29962.483Periophthalmus_magnuspinnatus
ENSG00000134697GNL29997.674ENSPEMG00000021234Gnl210086.122Peromyscus_maniculatus_bairdii
ENSG00000134697GNL28083.721ENSPMAG00000000974gnl210062.566Petromyzon_marinus
ENSG00000134697GNL299100.000ENSPCIG00000000135GNL210079.235Phascolarctos_cinereus
ENSG00000134697GNL29979.000ENSPFOG00000012893gnl29866.442Poecilia_formosa
ENSG00000134697GNL29979.000ENSPLAG00000012483gnl29866.761Poecilia_latipinna
ENSG00000134697GNL29979.000ENSPMEG00000019133gnl29867.236Poecilia_mexicana
ENSG00000134697GNL29979.000ENSPREG00000005988gnl29865.952Poecilia_reticulata
ENSG00000134697GNL210098.769ENSPPYG00000001529GNL210098.769Pongo_abelii
ENSG00000134697GNL29997.674ENSPCAG00000015772GNL28597.531Procavia_capensis
ENSG00000134697GNL299100.000ENSPCOG00000016681GNL210091.120Propithecus_coquereli
ENSG00000134697GNL28696.226ENSPVAG00000010131GNL28896.226Pteropus_vampyrus
ENSG00000134697GNL29979.000ENSPNAG00000005426gnl210067.423Pygocentrus_nattereri
ENSG00000134697GNL29996.512ENSRNOG00000009430Gnl210083.582Rattus_norvegicus
ENSG00000134697GNL299100.000ENSRBIG00000038390GNL210098.085Rhinopithecus_bieti
ENSG00000134697GNL299100.000ENSRROG00000014347GNL210097.401Rhinopithecus_roxellana
ENSG00000134697GNL29962.000YNR053CNOG29255.778Saccharomyces_cerevisiae
ENSG00000134697GNL29998.837ENSSBOG00000020194GNL210096.027Saimiri_boliviensis_boliviensis
ENSG00000134697GNL29998.837ENSSHAG00000012267GNL210078.533Sarcophilus_harrisii
ENSG00000134697GNL29988.372ENSSFOG00015020300gnl29868.094Scleropages_formosus
ENSG00000134697GNL29383.721ENSSMAG00000003472gnl29967.711Scophthalmus_maximus
ENSG00000134697GNL29979.000ENSSDUG00000010382gnl29967.962Seriola_dumerili
ENSG00000134697GNL29988.372ENSSLDG00000003122gnl29968.231Seriola_lalandi_dorsalis
ENSG00000134697GNL29997.674ENSSARG00000011342GNL210082.201Sorex_araneus
ENSG00000134697GNL29993.023ENSSPUG00000003826GNL210076.107Sphenodon_punctatus
ENSG00000134697GNL29978.000ENSSPAG00000017473gnl29968.182Stegastes_partitus
ENSG00000134697GNL210088.131ENSSSCG00000031631GNL210088.540Sus_scrofa
ENSG00000134697GNL210074.355ENSTGUG00000001547GNL210074.355Taeniopygia_guttata
ENSG00000134697GNL28090.698ENSTRUG00000009789gnl29867.125Takifugu_rubripes
ENSG00000134697GNL29986.047ENSTNIG00000003733gnl29966.265Tetraodon_nigroviridis
ENSG00000134697GNL29998.837ENSTBEG00000003443GNL210080.848Tupaia_belangeri
ENSG00000134697GNL29997.674ENSTTRG00000008600GNL210087.075Tursiops_truncatus
ENSG00000134697GNL299100.000ENSUAMG00000014123GNL210087.891Ursus_americanus
ENSG00000134697GNL299100.000ENSUMAG00000000413GNL210084.311Ursus_maritimus
ENSG00000134697GNL29881.743ENSVPAG00000001579GNL210081.335Vicugna_pacos
ENSG00000134697GNL299100.000ENSVVUG00000023157GNL210086.803Vulpes_vulpes
ENSG00000134697GNL29990.698ENSXETG00000002161gnl210071.448Xenopus_tropicalis
ENSG00000134697GNL29979.000ENSXCOG00000001649gnl29864.374Xiphophorus_couchianus
ENSG00000134697GNL29988.372ENSXMAG00000026406-9683.262Xiphophorus_maculatus
ENSG00000134697GNL29979.000ENSXMAG00000014898gnl29866.346Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003924GTPase activity8822211.NASFunction
GO:0005525GTP binding8822211.NASFunction
GO:0005634nucleus8822211.TASComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus-IDAComponent
GO:0008150biological_process-NDProcess
GO:0016020membrane19946888.HDAComponent
GO:0042254ribosome biogenesis-IEAProcess

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