EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000134987 (Gene tree)
Gene ID
134430
Gene Symbol
WDR36
Alias
TA-WDRP|UTP21|GLC1G
Full Name
WD repeat domain 36
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
38,787 bases
Position
chr5:111,091,716-111,130,502
Accession
30696
RBP type
canonical RBP
Summary
This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, apoptosis, and gene regulation. Mutations in this gene have been associated with adult-onset primary open-angle glaucoma (POAG). [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000424628Utp21PF04192.128.6e-6811
ENSP00000423067Utp21PF04192.129.6e-6811
ENSP00000479950Utp21PF04192.129.6e-6811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000505303WDR36-2022126--- (aa)--
ENST00000506538WDR36-2037048-ENSP00000423067951 (aa)-Q8NI36
ENST00000504122WDR36-201554--- (aa)--
ENST00000513710WDR36-2043140-ENSP00000424628895 (aa)-A0A0A0MTB8
ENST00000612402WDR36-2066592-ENSP00000479950951 (aa)-Q8NI36
ENST00000515784WDR36-205562--- (aa)--
Gene Model
Click here to download ENSG00000134987's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000134987Iron9.7110000E-00419880490
ENSG00000134987Iron8.9860000E-00419880490
ENSG00000134987Methadone6E-628115739
ENSG00000134987Opioid-Related Disorders6E-628115739
ENSG00000134987Asthma3E-1124388013
ENSG00000134987Rhinitis, Allergic, Seasonal3E-1124388013
ENSG00000134987Hypersensitivity3E-1727182965
ENSG00000134987Eosinophils1E-619198610
ENSG00000134987Hypersensitivity2E-2023817569
ENSG00000134987Periodontitis2E-624024966
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000134987rs24162575111099792GEosinophil counts19198610[3.7-8.6] % standard unit increase6.1EFO_0004842
ENSG00000134987rs798812015111092097TSum eosinophil basophil counts27863252[0.029-0.044] unit increase0.03636485EFO_0005090|EFO_0004842
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000134987's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000134987WDR3610094.196ENSAMEG00000012756WDR369991.958Ailuropoda_melanoleuca
ENSG00000134987WDR369959.009ENSACIG00000014835wdr369959.393Amphilophus_citrinellus
ENSG00000134987WDR369956.580ENSAOCG00000005280wdr369956.580Amphiprion_ocellaris
ENSG00000134987WDR369956.629ENSAPEG00000000335wdr369956.629Amphiprion_percula
ENSG00000134987WDR369958.559ENSATEG00000023085wdr369958.784Anabas_testudineus
ENSG00000134987WDR369474.083ENSAPLG00000012829WDR3610074.083Anas_platyrhynchos
ENSG00000134987WDR369972.748ENSACAG00000007141WDR369972.748Anolis_carolinensis
ENSG00000134987WDR3610097.542ENSANAG00000018849WDR3610097.542Aotus_nancymaae
ENSG00000134987WDR369957.995ENSACLG00000007577wdr369958.493Astatotilapia_calliptera
ENSG00000134987WDR369967.713ENSAMXG00000006706wdr369967.713Astyanax_mexicanus
ENSG00000134987WDR3610092.179ENSBTAG00000053476WDR3610092.179Bos_taurus
ENSG00000134987WDR369984.831ENSBTAG00000005489WDR369984.831Bos_taurus
ENSG00000134987WDR3610097.430ENSCJAG00000016277WDR3610096.534Callithrix_jacchus
ENSG00000134987WDR369992.360ENSCAFG00000007387WDR369992.360Canis_familiaris
ENSG00000134987WDR369992.601ENSCAFG00020013444WDR369992.601Canis_lupus_dingo
ENSG00000134987WDR3610092.179ENSCHIG00000026685WDR3610092.179Capra_hircus
ENSG00000134987WDR3610094.190ENSTSYG00000003163WDR3610094.190Carlito_syrichta
ENSG00000134987WDR367382.424ENSCAPG00000005041WDR368482.398Cavia_aperea
ENSG00000134987WDR369793.096ENSCPOG00000014638WDR369893.096Cavia_porcellus
ENSG00000134987WDR3610097.095ENSCCAG00000035644WDR3610097.095Cebus_capucinus
ENSG00000134987WDR3610098.883ENSCATG00000035085WDR369998.700Cercocebus_atys
ENSG00000134987WDR3610092.291ENSCLAG00000005745WDR3610092.316Chinchilla_lanigera
ENSG00000134987WDR3610098.994ENSCSAG00000014980WDR369998.808Chlorocebus_sabaeus
ENSG00000134987WDR369580.142ENSCHOG00000011273WDR369978.000Choloepus_hoffmanni
ENSG00000134987WDR369975.028ENSCPBG00000013928WDR369976.248Chrysemys_picta_bellii
ENSG00000134987WDR369946.239ENSCING00000005687-9946.239Ciona_intestinalis
ENSG00000134987WDR3610098.659ENSCANG00000034270WDR369998.267Colobus_angolensis_palliatus
ENSG00000134987WDR3610091.955ENSCGRG00001012983Wdr369991.638Cricetulus_griseus_chok1gshd
ENSG00000134987WDR369491.914ENSCGRG00000013589Wdr3610091.914Cricetulus_griseus_crigri
ENSG00000134987WDR369357.914ENSCSEG00000020460wdr369958.273Cynoglossus_semilaevis
ENSG00000134987WDR369958.474ENSCVAG00000022841wdr369958.586Cyprinodon_variegatus
ENSG00000134987WDR3610064.811ENSDARG00000004774wdr3610064.811Danio_rerio
ENSG00000134987WDR3610092.737ENSDNOG00000004563WDR3610092.737Dasypus_novemcinctus
ENSG00000134987WDR3610092.179ENSDORG00000005468-10092.179Dipodomys_ordii
ENSG00000134987WDR369839.866FBgn0038146CG97999839.646Drosophila_melanogaster
ENSG00000134987WDR369385.057ENSETEG00000016513WDR369381.667Echinops_telfairi
ENSG00000134987WDR369342.431ENSEBUG00000000461wdr369742.093Eptatretus_burgeri
ENSG00000134987WDR3610094.302ENSEASG00005015708WDR3610094.302Equus_asinus_asinus
ENSG00000134987WDR3610094.525ENSECAG00000017001WDR3610094.525Equus_caballus
ENSG00000134987WDR369993.131ENSEEUG00000008078WDR369989.368Erinaceus_europaeus
ENSG00000134987WDR369965.544ENSELUG00000003875wdr369965.544Esox_lucius
ENSG00000134987WDR3610094.413ENSFCAG00000022572WDR3610094.413Felis_catus
ENSG00000134987WDR369971.861ENSFALG00000010688WDR369972.197Ficedula_albicollis
ENSG00000134987WDR369993.326ENSFDAG00000009199WDR3610093.088Fukomys_damarensis
ENSG00000134987WDR368257.386ENSFHEG00000006019wdr3610057.386Fundulus_heteroclitus
ENSG00000134987WDR366854.198ENSGMOG00000009386wdr369554.198Gadus_morhua
ENSG00000134987WDR369973.073ENSGALG00000000247WDR369973.073Gallus_gallus
ENSG00000134987WDR365852.015ENSGAFG00000017276wdr369052.015Gambusia_affinis
ENSG00000134987WDR369956.708ENSGACG00000015461wdr369956.708Gasterosteus_aculeatus
ENSG00000134987WDR369974.299ENSGAGG00000016861WDR369874.299Gopherus_agassizii
ENSG00000134987WDR3610099.330ENSGGOG00000026914WDR3610099.264Gorilla_gorilla
ENSG00000134987WDR369558.265ENSHBUG00000010472wdr369958.802Haplochromis_burtoni
ENSG00000134987WDR3610093.855ENSHGLG00000008804WDR3610093.764Heterocephalus_glaber_female
ENSG00000134987WDR369993.624ENSHGLG00100004891WDR3610093.534Heterocephalus_glaber_male
ENSG00000134987WDR369955.906ENSHCOG00000001592wdr369956.067Hippocampus_comes
ENSG00000134987WDR369966.368ENSIPUG00000017751wdr369966.368Ictalurus_punctatus
ENSG00000134987WDR3610093.408ENSSTOG00000014672WDR369490.842Ictidomys_tridecemlineatus
ENSG00000134987WDR3610091.397ENSJJAG00000023683-10091.397Jaculus_jaculus
ENSG00000134987WDR367657.416ENSKMAG00000015303wdr3610057.416Kryptolebias_marmoratus
ENSG00000134987WDR369958.757ENSLBEG00000020493wdr369958.830Labrus_bergylta
ENSG00000134987WDR369969.016ENSLACG00000009326WDR3610070.286Latimeria_chalumnae
ENSG00000134987WDR369969.136ENSLOCG00000010374wdr369969.136Lepisosteus_oculatus
ENSG00000134987WDR3610091.732ENSLAFG00000009957WDR369991.750Loxodonta_africana
ENSG00000134987WDR3610098.994ENSMFAG00000001782WDR369998.808Macaca_fascicularis
ENSG00000134987WDR3610098.771ENSMMUG00000004670WDR3610098.771Macaca_mulatta
ENSG00000134987WDR3610098.994ENSMNEG00000037202WDR369998.700Macaca_nemestrina
ENSG00000134987WDR3610098.771ENSMLEG00000041259WDR3610098.771Mandrillus_leucophaeus
ENSG00000134987WDR369857.143ENSMAMG00000012989wdr369958.076Mastacembelus_armatus
ENSG00000134987WDR369958.446ENSMZEG00005023368wdr369958.446Maylandia_zebra
ENSG00000134987WDR369561.422ENSMGAG00000006803WDR3610061.422Meleagris_gallopavo
ENSG00000134987WDR368790.805ENSMAUG00000018806Wdr3610090.712Mesocricetus_auratus
ENSG00000134987WDR3610094.972ENSMICG00000000645WDR369893.615Microcebus_murinus
ENSG00000134987WDR3610090.838ENSMOCG00000012782Wdr369990.838Microtus_ochrogaster
ENSG00000134987WDR369956.902ENSMMOG00000021162wdr369956.902Mola_mola
ENSG00000134987WDR369980.894ENSMODG00000015652WDR369981.075Monodelphis_domestica
ENSG00000134987WDR369955.605ENSMALG00000013338wdr369955.605Monopterus_albus
ENSG00000134987WDR3610089.062MGP_CAROLIEiJ_G0022079Wdr369989.208Mus_caroli
ENSG00000134987WDR3610088.839ENSMUSG00000038299Wdr369988.978Mus_musculus
ENSG00000134987WDR3610089.955MGP_PahariEiJ_G0018813Wdr369990.011Mus_pahari
ENSG00000134987WDR3610089.062MGP_SPRETEiJ_G0022991Wdr369989.208Mus_spretus
ENSG00000134987WDR3610094.413ENSMPUG00000012646WDR3610094.413Mustela_putorius_furo
ENSG00000134987WDR3610093.980ENSMLUG00000002381WDR3610093.889Myotis_lucifugus
ENSG00000134987WDR3610091.955ENSNGAG00000015392Wdr3610091.759Nannospalax_galili
ENSG00000134987WDR369358.452ENSNBRG00000005131wdr369558.452Neolamprologus_brichardi
ENSG00000134987WDR3610098.633ENSNLEG00000011395WDR3610098.633Nomascus_leucogenys
ENSG00000134987WDR366580.220ENSMEUG00000009146-6580.220Notamacropus_eugenii
ENSG00000134987WDR366485.348ENSOPRG00000001327-7785.348Ochotona_princeps
ENSG00000134987WDR369992.282ENSODEG00000002759WDR3610092.196Octodon_degus
ENSG00000134987WDR369958.671ENSONIG00000012551wdr369958.943Oreochromis_niloticus
ENSG00000134987WDR3610075.028ENSOANG00000015157WDR3610075.028Ornithorhynchus_anatinus
ENSG00000134987WDR3610094.078ENSOCUG00000003129WDR3610094.078Oryctolagus_cuniculus
ENSG00000134987WDR369956.790ENSORLG00000019652wdr369956.902Oryzias_latipes
ENSG00000134987WDR369956.902ENSORLG00020018961wdr369957.015Oryzias_latipes_hni
ENSG00000134987WDR369957.030ENSORLG00015007362wdr369957.030Oryzias_latipes_hsok
ENSG00000134987WDR369957.255ENSOMEG00000005342wdr369957.368Oryzias_melastigma
ENSG00000134987WDR3610092.531ENSOGAG00000000608WDR3610092.333Otolemur_garnettii
ENSG00000134987WDR3610091.844ENSOARG00000018968WDR369988.168Ovis_aries
ENSG00000134987WDR3610099.441ENSPPAG00000023560WDR3610099.441Pan_paniscus
ENSG00000134987WDR3610094.525ENSPPRG00000005832WDR3610094.525Panthera_pardus
ENSG00000134987WDR3610094.302ENSPTIG00000009401WDR3610094.302Panthera_tigris_altaica
ENSG00000134987WDR3610099.474ENSPTRG00000017128WDR3610099.474Pan_troglodytes
ENSG00000134987WDR3610098.883ENSPANG00000004679WDR369798.883Papio_anubis
ENSG00000134987WDR369666.280ENSPKIG00000025589wdr369867.436Paramormyrops_kingsleyae
ENSG00000134987WDR369973.490ENSPSIG00000011688WDR369973.490Pelodiscus_sinensis
ENSG00000134987WDR369955.095ENSPMGG00000006948wdr369955.319Periophthalmus_magnuspinnatus
ENSG00000134987WDR3610091.397ENSPEMG00000017285Wdr369991.397Peromyscus_maniculatus_bairdii
ENSG00000134987WDR369450.879ENSPMAG00000007054wdr3610051.054Petromyzon_marinus
ENSG00000134987WDR369981.172ENSPCIG00000004387WDR369980.942Phascolarctos_cinereus
ENSG00000134987WDR369957.063ENSPFOG00000001899wdr369957.175Poecilia_formosa
ENSG00000134987WDR369457.227ENSPLAG00000008165wdr369857.346Poecilia_latipinna
ENSG00000134987WDR369957.175ENSPMEG00000014702wdr369957.287Poecilia_mexicana
ENSG00000134987WDR368956.713ENSPREG00000017144wdr369956.713Poecilia_reticulata
ENSG00000134987WDR3610098.883ENSPPYG00000015679WDR3610098.883Pongo_abelii
ENSG00000134987WDR369186.538ENSPCAG00000015799WDR368693.333Procavia_capensis
ENSG00000134987WDR3610079.188ENSPCOG00000020442WDR369579.188Propithecus_coquereli
ENSG00000134987WDR3610094.190ENSPVAG00000001900WDR369990.397Pteropus_vampyrus
ENSG00000134987WDR369957.883ENSPNYG00000011708wdr369958.380Pundamilia_nyererei
ENSG00000134987WDR368964.633ENSPNAG00000007572wdr369664.633Pygocentrus_nattereri
ENSG00000134987WDR3610089.162ENSRNOG00000027355Wdr3610089.075Rattus_norvegicus
ENSG00000134987WDR3610098.324ENSRBIG00000040788WDR369998.050Rhinopithecus_bieti
ENSG00000134987WDR368598.681ENSRROG00000042369WDR3610098.681Rhinopithecus_roxellana
ENSG00000134987WDR369531.884YLR409C-9431.884Saccharomyces_cerevisiae
ENSG00000134987WDR3610095.531ENSSBOG00000031972WDR3610094.742Saimiri_boliviensis_boliviensis
ENSG00000134987WDR369381.190ENSSHAG00000003687WDR3610081.190Sarcophilus_harrisii
ENSG00000134987WDR369967.455ENSSFOG00015011783wdr369967.455Scleropages_formosus
ENSG00000134987WDR369857.435ENSSMAG00000008869wdr369957.593Scophthalmus_maximus
ENSG00000134987WDR369358.065ENSSDUG00000002806wdr369658.145Seriola_dumerili
ENSG00000134987WDR369954.587ENSSLDG00000001712wdr3610053.677Seriola_lalandi_dorsalis
ENSG00000134987WDR369388.940ENSSARG00000014158WDR369388.940Sorex_araneus
ENSG00000134987WDR369974.103ENSSPUG00000015643WDR3610074.103Sphenodon_punctatus
ENSG00000134987WDR369956.580ENSSPAG00000011530wdr369956.693Stegastes_partitus
ENSG00000134987WDR3610093.855ENSSSCG00000014199WDR3610094.039Sus_scrofa
ENSG00000134987WDR369368.503ENSTGUG00000000989WDR3610068.862Taeniopygia_guttata
ENSG00000134987WDR369958.333ENSTRUG00000008438wdr369958.559Takifugu_rubripes
ENSG00000134987WDR369957.464ENSTNIG00000013251wdr369957.464Tetraodon_nigroviridis
ENSG00000134987WDR369385.800ENSTBEG00000013126WDR3610085.800Tupaia_belangeri
ENSG00000134987WDR3610092.291ENSTTRG00000000590WDR369989.989Tursiops_truncatus
ENSG00000134987WDR3610094.413ENSUAMG00000016133WDR3610094.413Ursus_americanus
ENSG00000134987WDR3610094.302ENSUMAG00000015661WDR3610094.302Ursus_maritimus
ENSG00000134987WDR3610093.743ENSVPAG00000011242WDR369991.254Vicugna_pacos
ENSG00000134987WDR3610090.838ENSVVUG00000012684WDR3610092.822Vulpes_vulpes
ENSG00000134987WDR369968.350ENSXETG00000011004wdr369968.687Xenopus_tropicalis
ENSG00000134987WDR369350.778ENSXCOG00000000434wdr3610049.222Xiphophorus_couchianus
ENSG00000134987WDR369957.175ENSXMAG00000005092wdr369957.287Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001895retina homeostasis-IEAProcess
GO:0003723RNA binding22658674.HDAFunction
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus-IDAComponent
GO:0006364rRNA processing21873635.IBAProcess
GO:0006364rRNA processing-TASProcess
GO:0007601visual perception-IEAProcess
GO:0008150biological_process-NDProcess
GO:0030516regulation of axon extension-IEAProcess
GO:0032040small-subunit processome21873635.IBAComponent
GO:0034388Pwp2p-containing subcomplex of 90S preribosome21873635.IBAComponent
GO:0050896response to stimulus-IEAProcess

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