EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000135968 (Gene tree)
Gene ID: 9648
Gene Symbol: GCC2
Alias: GCC185|KIAA0336
Full Name: GRIP and coiled-coil domain containing 2
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 60,855 bases
Position: chr2:108,448,561-108,509,415
Accession: 23218
RBP type: non-canonical RBP
Summary: The protein encoded by this gene is a peripheral membrane protein localized to the trans-Golgi network. It is sensitive to brefeldin A. This encoded protein contains a GRIP domain which is thought to be used in targeting. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2009]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000467566	GCC2-207	477	-	-	- (aa)	-	-
ENST00000462897	GCC2-206	982	-	ENSP00000475234	146 (aa)	-	U3KPU4
ENST00000481729	GCC2-210	634	-	-	- (aa)	-	-
ENST00000478207	GCC2-208	543	-	-	- (aa)	-	-
ENST00000409896	GCC2-204	2908	-	ENSP00000386997	916 (aa)	-	B8ZZW2
ENST00000480863	GCC2-209	5867	-	-	- (aa)	-	-
ENST00000447558	GCC2-205	540	-	ENSP00000392470	87 (aa)	-	H7C010
ENST00000393321	GCC2-202	1366	-	ENSP00000376996	247 (aa)	-	H7BYJ9
ENST00000409821	GCC2-203	786	XM_006712872	ENSP00000387350	247 (aa)	XP_006712935	B8ZZA5
ENST00000309863	GCC2-201	7537	XM_006712870	ENSP00000307939	1684 (aa)	XP_006712933	Q8IWJ2
ENST00000482325	GCC2-211	6772	-	ENSP00000419969	45 (aa)	-	Q8IWJ2
ENST00000485546	GCC2-212	610	-	-	- (aa)	-	-
ENST00000492785	GCC2-213	774	-	ENSP00000475798	127 (aa)	-	U3KQE0

Gene Model

Click here to download ENSG00000135968's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000135968's network

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	16885419.17543864.18195106.18243103.	IPI	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	18243103.	IDA	Component
GO:0005802	trans-Golgi network	16885419.17488291.	IDA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006622	protein targeting to lysosome	21873635.	IBA	Process
GO:0006622	protein targeting to lysosome	16885419.	IMP	Process
GO:0016020	membrane	19946888.	HDA	Component
GO:0031023	microtubule organizing center organization	21873635.	IBA	Process
GO:0031023	microtubule organizing center organization	17543864.	IMP	Process
GO:0034067	protein localization to Golgi apparatus	21873635.	IBA	Process
GO:0034067	protein localization to Golgi apparatus	16885419.17488291.	IMP	Process
GO:0034453	microtubule anchoring	17543864.	IMP	Process
GO:0034499	late endosome to Golgi transport	21873635.	IBA	Process
GO:0034499	late endosome to Golgi transport	16885419.	IMP	Process
GO:0042147	retrograde transport, endosome to Golgi	17488291.	IMP	Process
GO:0042802	identical protein binding	18243103.	IPI	Function
GO:0043001	Golgi to plasma membrane protein transport	16885419.	IMP	Process
GO:0070861	regulation of protein exit from endoplasmic reticulum	21873635.	IBA	Process
GO:0070861	regulation of protein exit from endoplasmic reticulum	17488291.	IMP	Process
GO:0071955	recycling endosome to Golgi transport	21873635.	IBA	Process
GO:0071955	recycling endosome to Golgi transport	17488291.	IMP	Process
GO:0090161	Golgi ribbon formation	21873635.	IBA	Process
GO:0090161	Golgi ribbon formation	16885419.17488291.	IMP	Process