EuRBPDB

Description

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000136279 (Gene tree)
Gene ID: 28988
Gene Symbol: DBNL
Alias: SH3P7|HIP-55|ABP1
Full Name: drebrin like
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 24,817 bases
Position: chr7:44,044,640-44,069,456
Accession: 2696
RBP type: non-canonical RBP
Summary: (Drebrin Like) is a Protein Coding gene. Among its related pathways are T cell receptor signaling pathway and Protein-protein interactions at synapses. Gene Ontology (GO) annotations related to this gene include actin binding and protein C-terminus binding. An important paralog of this gene is DBN1.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
12565838	Mammalian actin binding protein 1 is essential for endocytosis but not lamellipodia formation: functional analysis by RNA interference.	Biochem Biophys Res Commun	2003 Feb 14	Mise-Omata S	-

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000494774	DBNL-220	2117	-	ENSP00000419992	431 (aa)	-	Q9UJU6
ENST00000441840	DBNL-208	1854	-	ENSP00000392113	50 (aa)	-	F8WC20
ENST00000439983	DBNL-206	615	-	-	- (aa)	-	-
ENST00000498733	DBNL-222	1401	-	ENSP00000418978	48 (aa)	-	F2Z3E3
ENST00000490734	DBNL-219	2004	-	ENSP00000417749	336 (aa)	-	Q9UJU6
ENST00000429716	DBNL-203	1622	-	ENSP00000400817	87 (aa)	-	F8WFE1
ENST00000441904	DBNL-209	878	-	ENSP00000415395	48 (aa)	-	F2Z3E3
ENST00000464762	DBNL-216	693	-	ENSP00000418006	128 (aa)	-	F8WBG8
ENST00000468694	DBNL-217	2068	XM_011515325	ENSP00000417653	439 (aa)	-	Q9UJU6
ENST00000449997	DBNL-211	2169	-	-	- (aa)	-	-
ENST00000439815	DBNL-205	561	-	ENSP00000410681	31 (aa)	-	F8WB73
ENST00000458579	DBNL-215	662	-	ENSP00000403372	27 (aa)	-	F2Z2V3
ENST00000448521	DBNL-210	1808	-	ENSP00000411701	430 (aa)	-	Q9UJU6
ENST00000452943	DBNL-213	1513	-	ENSP00000405343	406 (aa)	-	B4DDD6
ENST00000432854	DBNL-204	9618	-	ENSP00000398931	359 (aa)	-	H0Y5J4
ENST00000485932	DBNL-218	553	-	ENSP00000418301	40 (aa)	-	F8WCK3
ENST00000411855	DBNL-201	1447	-	ENSP00000390397	62 (aa)	-	F8WBB2
ENST00000497184	DBNL-221	4090	-	-	- (aa)	-	-
ENST00000440166	DBNL-207	1415	-	ENSP00000415173	327 (aa)	-	Q9UJU6
ENST00000452661	DBNL-212	897	-	ENSP00000397855	138 (aa)	-	H7C111
ENST00000423561	DBNL-202	634	-	-	- (aa)	-	-
ENST00000456905	DBNL-214	1241	-	ENSP00000416421	382 (aa)	-	Q9UJU6

Gene Model

Click here to download ENSG00000136279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000136279's network

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000139	Golgi membrane	-	IEA	Component
GO:0001726	ruffle	-	ISS	Component
GO:0002102	podosome	-	ISS	Component
GO:0002250	adaptive immune response	-	IEA	Process
GO:0003779	actin binding	-	ISS	Function
GO:0005515	protein binding	16189514.17306257.19060904.21044950.25416956.	IPI	Function
GO:0005576	extracellular region	-	TAS	Component
GO:0005737	cytoplasm	25468996.	IDA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0005769	early endosome	-	IEA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005938	cell cortex	-	ISS	Component
GO:0006898	receptor-mediated endocytosis	-	IEA	Process
GO:0007257	activation of JUN kinase activity	10567356.	TAS	Process
GO:0007416	synapse assembly	-	ISS	Process
GO:0008022	protein C-terminus binding	-	IEA	Function
GO:0008047	enzyme activator activity	10567356.	TAS	Function
GO:0014069	postsynaptic density	-	IEA	Component
GO:0016601	Rac protein signal transduction	-	ISS	Process
GO:0019904	protein domain specific binding	-	IEA	Function
GO:0030027	lamellipodium	-	ISS	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030425	dendrite	-	IEA	Component
GO:0030665	clathrin-coated vesicle membrane	-	IEA	Component
GO:0034774	secretory granule lumen	-	TAS	Component
GO:0043312	neutrophil degranulation	-	TAS	Process
GO:0045296	cadherin binding	25468996.	HDA	Function
GO:0048812	neuron projection morphogenesis	-	ISS	Process
GO:0051015	actin filament binding	-	ISS	Function
GO:0070062	extracellular exosome	19056867.	HDA	Component
GO:0071800	podosome assembly	-	ISS	Process
GO:0097178	ruffle assembly	-	IEA	Process
GO:1904724	tertiary granule lumen	-	TAS	Component
GO:1904813	ficolin-1-rich granule lumen	-	TAS	Component