EuRBPDB

Description

Ensembl ID: ENSG00000137040 (Gene tree)
Gene ID: 26953
Gene Symbol: RANBP6
Alias: N
Full Name: RAN binding protein 6
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 4,622 bases
Position: chr9:6,011,019-6,015,640
Accession: 9851
RBP type: non-canonical RBP
Summary: (RAN Binding Protein 6) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include binding. An important paralog of this gene is IPO5.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000259569	RANBP6-201	4576	XM_017014624	ENSP00000259569	1105 (aa)	XP_016870113	O60518
ENST00000485372	RANBP6-202	1000	-	ENSP00000485188	68 (aa)	-	A0A096LNS2
ENST00000623170	RANBP6-203	704	-	ENSP00000485482	228 (aa)	-	A0A096LPA6

Gene Model

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000137040	Personality	4.763e-005	-
ENSG00000137040	Triglycerides	3.9150000E-005	-
ENSG00000137040	Triglycerides	1.4250000E-005	-
ENSG00000137040	Hypersensitivity	2E-9	23817569
ENSG00000137040	Asthma	2E-6	24388013
ENSG00000137040	Rhinitis, Allergic, Seasonal	2E-6	24388013
ENSG00000137040	Asthma	2E-9	24388013
ENSG00000137040	Rhinitis, Allergic, Seasonal	2E-9	24388013
ENSG00000137040	Asthma	9E-10	20860503
ENSG00000137040	Asthma	2E-12	21804549

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	22190034.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006610	ribosomal protein import into nucleus	21873635.	IBA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0031965	nuclear membrane	21873635.	IBA	Component
GO:0034399	nuclear periphery	21873635.	IBA	Component