EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • PRI
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000137656 (Gene tree)
Gene ID
84811
Gene Symbol
BUD13
Alias
MGC13125|fSAP71|Cwc26
Full Name
BUD13 homolog
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
24,829 bases
Position
chr11:116,748,170-116,772,998
Accession
28199
RBP type
canonical RBP
Summary
(BUD13 Homolog) is a Protein Coding gene.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000364594Bud13PF09736.91.2e-4911
ENSP00000260210Bud13PF09736.91.8e-4911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Click here to download all RNA binding sites

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
24140279Methylation of the DNA/RNA-binding protein Kin17 by METTL22 affects its association with chromatin.J Proteomics2014 Apr 4Cloutier Pdoi: 10.1016/j.jprot.2013.10.008
30639243BUD13 Promotes a Type I Interferon Response by Countering Intron Retention in Irf7.Mol Cell2019 Feb 21Frankiw Ldoi: 10.1016/j.molcel.2018.11.038
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000419189BUD13-203947-ENSP00000415748118 (aa)-H7C462
ENST00000375445BUD13-2021793-ENSP00000364594485 (aa)-Q9BRD0
ENST00000260210BUD13-2012196XM_011543035ENSP00000260210619 (aa)XP_011541337Q9BRD0
Gene Model
Click here to download ENSG00000137656's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000137656Triglycerides7.793e-00519060910
ENSG00000137656Triglycerides4.4940000E-005-
ENSG00000137656alpha-Tocopherol4.3050000E-005-
ENSG00000137656Hypertriglyceridemia1.4550000E-015-
ENSG00000137656Hypertriglyceridemia1.6610000E-006-
ENSG00000137656Hypertriglyceridemia1.3950000E-006-
ENSG00000137656Hypertriglyceridemia2.1220000E-007-
ENSG00000137656Triglycerides3E-12824097068
ENSG00000137656Bronchodilator Agents2E-626634245
ENSG00000137656Lung Volume Measurements2E-626634245
ENSG00000137656Metabolism3E-1124816252
ENSG00000137656Bronchodilator Agents2E-626634245
ENSG00000137656Lung Volume Measurements2E-626634245
ENSG00000137656Blood Pressure3E-921386085
ENSG00000137656Triglycerides3E-921386085
ENSG00000137656Hypertriglyceridemia7E-2027599772
ENSG00000137656Influenza A Virus, H1N1 Subtype1E-1026379185
ENSG00000137656Triglycerides3E-724023261
ENSG00000137656Metabolic Syndrome X6E-921386085
ENSG00000137656Cholesterol, HDL9E-623251661
ENSG00000137656Triglycerides9E-623251661
ENSG00000137656Triglycerides2E-1718193044
ENSG00000137656Cholesterol, HDL3E-1521386085
ENSG00000137656Triglycerides3E-1521386085
ENSG00000137656Metabolic Syndrome X5E-921386085
ENSG00000137656Triglycerides7E-1621386085
ENSG00000137656Metabolic Syndrome X7E-1621386085
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000137656rs658956411116753437CBone mineral density (femoral neck) in inflammatory bowel disease29603369[NR] unit decrease0.4551EFO_0003767|EFO_0007785
ENSG00000137656rs18969312111116753379APost bronchodilator FEV1/FVC ratio26634245unit increase0.441GO_0097366|EFO_0004713
ENSG00000137656rs18129068811116753380APost bronchodilator FEV1/FVC ratio26634245unit increase0.441GO_0097366|EFO_0004713
ENSG00000137656rs2892768011116748357GLipid traits24023261unit increase0.22EFO_0004530
ENSG00000137656rs1121613111116762864?Severe influenza A (H1N1) infection26379185EFO_1001488
ENSG00000137656rs1182518111116755542ABlood metabolite levels24816252[0.054-0.098] unit increase0.076EFO_0005664
ENSG00000137656rs6650554211116752498TPlatelet count27863252[0.033-0.054] unit increase0.04332688EFO_0004309
ENSG00000137656rs18032611116753987CTriglyceride levels28371326[0.05-0.06] unit increase0.06EFO_0004530
ENSG00000137656rs2892768011116748357GTriglycerides18193044[0.20-0.32] unit increase0.26EFO_0004530
ENSG00000137656rs1079016211116768388AHDL Cholesterol - Triglycerides (HDLC-TG)21386085[0.28-0.48] unit increase0.38EFO_0004530|EFO_0004612
ENSG00000137656rs1079016211116768388AMetabolic syndrome21386085[0.17-0.33] unit increase0.25EFO_0000195
ENSG00000137656rs1182518111116755542ATriglycerides-Blood Pressure (TG-BP)21386085[0.22-0.42] unit increase0.32EFO_0004530|EFO_0004325
ENSG00000137656rs1182058911116763146AMetabolic syndrome (bivariate traits)21386085[0.20-0.44] unit increase0.32EFO_0000195
ENSG00000137656rs1079016211116768388AWaist Circumference - Triglycerides (WC-TG)21386085[0.29-0.49] unit increase0.39EFO_0004530|EFO_0000195
ENSG00000137656rs6650554211116752498TSum eosinophil basophil counts27863252[0.023-0.044] unit increase0.03347477EFO_0005090|EFO_0004842
ENSG00000137656rs1079016211116768388ATriglyceride levels28334899[0.19-0.24] unit increase0.214EFO_0004530
ENSG00000137656rs6650554211116752498TRed cell distribution width28957414[0.032-0.054] unit increase0.042759EFO_0005192
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000137656's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000137656BUD139950.000ENSAPOG00000013402si:dkeyp-69c1.69849.071Acanthochromis_polyacanthus
ENSG00000137656BUD1310083.125ENSAMEG00000008712BUD1310082.500Ailuropoda_melanoleuca
ENSG00000137656BUD139949.351ENSACIG00000003246si:dkeyp-69c1.69848.598Amphilophus_citrinellus
ENSG00000137656BUD139950.268ENSAOCG00000007679si:dkeyp-69c1.69848.932Amphiprion_ocellaris
ENSG00000137656BUD139950.854ENSAPEG00000023734si:dkeyp-69c1.69850.287Amphiprion_percula
ENSG00000137656BUD139951.648ENSATEG00000021254si:dkeyp-69c1.69850.909Anabas_testudineus
ENSG00000137656BUD139952.403ENSACAG00000001884BUD139950.356Anolis_carolinensis
ENSG00000137656BUD1310088.253ENSANAG00000035220BUD139985.759Aotus_nancymaae
ENSG00000137656BUD139949.192ENSACLG00000020797si:dkeyp-69c1.69848.309Astatotilapia_calliptera
ENSG00000137656BUD138150.192ENSACLG00000021004-9760.976Astatotilapia_calliptera
ENSG00000137656BUD1310054.721ENSAMXG00000004165si:dkeyp-69c1.69955.086Astyanax_mexicanus
ENSG00000137656BUD1310079.601ENSBTAG00000016855BUD1310079.601Bos_taurus
ENSG00000137656BUD139831.287WBGene00011142R08D7.19931.262Caenorhabditis_elegans
ENSG00000137656BUD1310082.774ENSCJAG00000012570BUD1310083.655Callithrix_jacchus
ENSG00000137656BUD1310084.026ENSCAFG00000013400BUD1310084.026Canis_familiaris
ENSG00000137656BUD1310072.865ENSCAFG00020002396BUD1310077.264Canis_lupus_dingo
ENSG00000137656BUD1310078.746ENSCHIG00000011480BUD1310078.746Capra_hircus
ENSG00000137656BUD1310087.107ENSTSYG00000007285BUD1310087.107Carlito_syrichta
ENSG00000137656BUD139278.441ENSCAPG00000009620BUD1310077.612Cavia_aperea
ENSG00000137656BUD1310078.187ENSCPOG00000014440BUD1310078.849Cavia_porcellus
ENSG00000137656BUD1310093.402ENSCCAG00000024422BUD1310093.402Cebus_capucinus
ENSG00000137656BUD1310094.992ENSCATG00000042919BUD1310094.669Cercocebus_atys
ENSG00000137656BUD1310073.761ENSCLAG00000014184BUD1310072.661Chinchilla_lanigera
ENSG00000137656BUD1310095.477ENSCSAG00000002732BUD1310095.477Chlorocebus_sabaeus
ENSG00000137656BUD1310082.035ENSCHOG00000008596BUD1310079.563Choloepus_hoffmanni
ENSG00000137656BUD139056.768ENSCPBG00000020276BUD1310055.179Chrysemys_picta_bellii
ENSG00000137656BUD139935.619ENSCING00000006692-9735.741Ciona_intestinalis
ENSG00000137656BUD135239.544ENSCSAVG00000000541-9740.152Ciona_savignyi
ENSG00000137656BUD1310093.538ENSCANG00000042795BUD1310093.538Colobus_angolensis_palliatus
ENSG00000137656BUD1310078.159ENSCGRG00001019626Bud1310074.351Cricetulus_griseus_chok1gshd
ENSG00000137656BUD1310078.438ENSCGRG00000013879Bud1310074.618Cricetulus_griseus_crigri
ENSG00000137656BUD139952.446ENSCSEG00000010161si:dkeyp-69c1.69452.767Cynoglossus_semilaevis
ENSG00000137656BUD139948.776ENSCVAG00000002633si:dkeyp-69c1.69851.252Cyprinodon_variegatus
ENSG00000137656BUD1310050.577ENSDARG00000006666si:dkeyp-69c1.69950.669Danio_rerio
ENSG00000137656BUD1310082.215ENSDNOG00000042988BUD1310082.215Dasypus_novemcinctus
ENSG00000137656BUD1310076.543ENSDORG00000012405Bud139981.407Dipodomys_ordii
ENSG00000137656BUD1310039.437FBgn0039210CG136259941.714Drosophila_melanogaster
ENSG00000137656BUD139568.297ENSETEG00000011902BUD1310072.727Echinops_telfairi
ENSG00000137656BUD1310036.496ENSEBUG00000012952si:dkeyp-69c1.610035.046Eptatretus_burgeri
ENSG00000137656BUD139273.582ENSEASG00005006650BUD1310072.239Equus_asinus_asinus
ENSG00000137656BUD1310078.855ENSECAG00000008863BUD1310075.035Equus_caballus
ENSG00000137656BUD138778.022ENSEEUG00000009332BUD1310078.022Erinaceus_europaeus
ENSG00000137656BUD139948.537ENSELUG00000011399si:dkeyp-69c1.69748.780Esox_lucius
ENSG00000137656BUD1310083.520ENSFCAG00000011856BUD1310083.520Felis_catus
ENSG00000137656BUD139058.397ENSFALG00000005527BUD1310054.259Ficedula_albicollis
ENSG00000137656BUD1310078.428ENSFDAG00000000853BUD1310077.966Fukomys_damarensis
ENSG00000137656BUD139951.257ENSFHEG00000017085si:dkeyp-69c1.69853.479Fundulus_heteroclitus
ENSG00000137656BUD139944.841ENSGMOG00000002316si:dkeyp-69c1.69744.533Gadus_morhua
ENSG00000137656BUD139954.816ENSGALG00000025882BUD139953.922Gallus_gallus
ENSG00000137656BUD139949.027ENSGAFG00000000968si:dkeyp-69c1.69849.605Gambusia_affinis
ENSG00000137656BUD139945.988ENSGACG00000020632si:dkeyp-69c1.69945.243Gasterosteus_aculeatus
ENSG00000137656BUD139956.886ENSGAGG00000010543BUD139960.857Gopherus_agassizii
ENSG00000137656BUD139599.151ENSGGOG00000000662BUD1310099.151Gorilla_gorilla
ENSG00000137656BUD1310080.435ENSHGLG00000013562BUD1310079.969Heterocephalus_glaber_female
ENSG00000137656BUD139945.328ENSHCOG00000000187si:dkeyp-69c1.69745.328Hippocampus_comes
ENSG00000137656BUD139951.625ENSIPUG00000001490bud139950.285Ictalurus_punctatus
ENSG00000137656BUD1310079.045ENSSTOG00000002302BUD1310078.101Ictidomys_tridecemlineatus
ENSG00000137656BUD1310075.194ENSJJAG00000010737Bud139973.367Jaculus_jaculus
ENSG00000137656BUD139951.951ENSKMAG00000022255si:dkeyp-69c1.69751.521Kryptolebias_marmoratus
ENSG00000137656BUD139951.710ENSLBEG00000015760si:dkeyp-69c1.69748.924Labrus_bergylta
ENSG00000137656BUD139958.621ENSLACG00000014576BUD139940.877Latimeria_chalumnae
ENSG00000137656BUD139459.441ENSLOCG00000005915si:dkeyp-69c1.69952.713Lepisosteus_oculatus
ENSG00000137656BUD1310076.176ENSLAFG00000010279BUD1310078.549Loxodonta_africana
ENSG00000137656BUD1310095.477ENSMFAG00000036204BUD1310095.477Macaca_fascicularis
ENSG00000137656BUD1310096.495ENSMMUG00000020002BUD1310096.495Macaca_mulatta
ENSG00000137656BUD1310090.792ENSMNEG00000039484BUD1310092.937Macaca_nemestrina
ENSG00000137656BUD1310095.315ENSMLEG00000010496BUD1310094.992Mandrillus_leucophaeus
ENSG00000137656BUD139949.813ENSMAMG00000018919si:dkeyp-69c1.69850.372Mastacembelus_armatus
ENSG00000137656BUD137752.593ENSMZEG00005018950-8349.872Maylandia_zebra
ENSG00000137656BUD136742.989ENSMZEG00005018935-8644.604Maylandia_zebra
ENSG00000137656BUD138150.000ENSMZEG00005018919-9154.857Maylandia_zebra
ENSG00000137656BUD139950.313ENSMZEG00005018890si:dkeyp-69c1.69853.285Maylandia_zebra
ENSG00000137656BUD136737.740ENSMZEG00005018954-8743.333Maylandia_zebra
ENSG00000137656BUD137051.163ENSMZEG00005018960si:dkeyp-69c1.68753.103Maylandia_zebra
ENSG00000137656BUD137158.113ENSMGAG00000003081BUD139764.530Meleagris_gallopavo
ENSG00000137656BUD139975.949ENSMAUG00000008604Bud1310076.312Mesocricetus_auratus
ENSG00000137656BUD1310088.008ENSMICG00000002320BUD1310087.340Microcebus_murinus
ENSG00000137656BUD1310076.553ENSMOCG00000020780Bud1310072.973Microtus_ochrogaster
ENSG00000137656BUD139954.268ENSMMOG00000018777si:dkeyp-69c1.69854.858Mola_mola
ENSG00000137656BUD1310060.667ENSMODG00000013825BUD139764.851Monodelphis_domestica
ENSG00000137656BUD139948.537ENSMALG00000007372si:dkeyp-69c1.69947.352Monopterus_albus
ENSG00000137656BUD1310074.962MGP_CAROLIEiJ_G0032160Bud1310073.939Mus_caroli
ENSG00000137656BUD1310076.615ENSMUSG00000032077Bud139096.988Mus_musculus
ENSG00000137656BUD1310077.586MGP_SPRETEiJ_G0033299Bud1310076.498Mus_spretus
ENSG00000137656BUD1310071.709ENSMPUG00000004040BUD1310070.000Mustela_putorius_furo
ENSG00000137656BUD1310073.692ENSMLUG00000030637-10073.692Myotis_lucifugus
ENSG00000137656BUD1310068.650ENSMLUG00000023889-10067.840Myotis_lucifugus
ENSG00000137656BUD1310078.529ENSMLUG00000014006-10078.529Myotis_lucifugus
ENSG00000137656BUD1310074.772ENSNGAG00000015401Bud1310074.962Nannospalax_galili
ENSG00000137656BUD139446.557ENSNBRG00000007225si:dkeyp-69c1.69850.400Neolamprologus_brichardi
ENSG00000137656BUD1310097.254ENSNLEG00000007329BUD1310097.254Nomascus_leucogenys
ENSG00000137656BUD138250.529ENSMEUG00000005039-10051.671Notamacropus_eugenii
ENSG00000137656BUD138761.679ENSMEUG00000002945-8764.216Notamacropus_eugenii
ENSG00000137656BUD1310071.474ENSOPRG00000016230BUD1310071.677Ochotona_princeps
ENSG00000137656BUD1310073.667ENSODEG00000009553BUD1310075.201Octodon_degus
ENSG00000137656BUD139949.645ENSONIG00000004913si:dkeyp-69c1.69749.433Oreochromis_niloticus
ENSG00000137656BUD137276.772ENSOANG00000004370-10076.772Ornithorhynchus_anatinus
ENSG00000137656BUD1310081.731ENSOCUG00000004615BUD1310081.090Oryctolagus_cuniculus
ENSG00000137656BUD139949.727ENSORLG00000005682si:dkeyp-69c1.69950.545Oryzias_latipes
ENSG00000137656BUD139949.346ENSORLG00020008669si:dkeyp-69c1.69949.722Oryzias_latipes_hni
ENSG00000137656BUD139951.673ENSORLG00015014456si:dkeyp-69c1.69951.201Oryzias_latipes_hsok
ENSG00000137656BUD139951.111ENSOMEG00000018921si:dkeyp-69c1.69751.866Oryzias_melastigma
ENSG00000137656BUD1310081.891ENSOGAG00000009973BUD1310081.891Otolemur_garnettii
ENSG00000137656BUD1310078.101ENSOARG00000001906BUD1310077.335Ovis_aries
ENSG00000137656BUD1310099.515ENSPPAG00000040801BUD1310099.515Pan_paniscus
ENSG00000137656BUD1310083.360ENSPPRG00000017223BUD1310083.360Panthera_pardus
ENSG00000137656BUD139085.588ENSPTIG00000010320BUD139584.989Panthera_tigris_altaica
ENSG00000137656BUD1310099.515ENSPTRG00000004311BUD1310099.515Pan_troglodytes
ENSG00000137656BUD1310095.477ENSPANG00000014015BUD1310095.153Papio_anubis
ENSG00000137656BUD139949.171ENSPKIG00000015986si:dkeyp-69c1.69049.171Paramormyrops_kingsleyae
ENSG00000137656BUD137358.824ENSPSIG00000013803BUD139058.824Pelodiscus_sinensis
ENSG00000137656BUD139949.038ENSPMGG00000005014si:dkeyp-69c1.69948.718Periophthalmus_magnuspinnatus
ENSG00000137656BUD139470.323ENSPEMG00000016113Bud139770.924Peromyscus_maniculatus_bairdii
ENSG00000137656BUD139431.856ENSPMAG00000009376si:dkeyp-69c1.610034.979Petromyzon_marinus
ENSG00000137656BUD139950.096ENSPFOG00000018569si:dkeyp-69c1.69850.388Poecilia_formosa
ENSG00000137656BUD139949.806ENSPLAG00000007067si:dkeyp-69c1.69850.097Poecilia_latipinna
ENSG00000137656BUD139949.904ENSPMEG00000002258si:dkeyp-69c1.69850.579Poecilia_mexicana
ENSG00000137656BUD139949.023ENSPREG00000017161si:dkeyp-69c1.69851.200Poecilia_reticulata
ENSG00000137656BUD139195.637ENSPPYG00000003900BUD139495.637Pongo_abelii
ENSG00000137656BUD1310078.056ENSPCAG00000011376BUD1310078.056Procavia_capensis
ENSG00000137656BUD138094.891ENSPCOG00000022101BUD1310094.891Propithecus_coquereli
ENSG00000137656BUD1310077.564ENSPVAG00000017826BUD1310077.564Pteropus_vampyrus
ENSG00000137656BUD139953.249ENSPNAG00000015803si:dkeyp-69c1.69851.444Pygocentrus_nattereri
ENSG00000137656BUD1310076.316ENSRNOG00000018665Bud1310075.387Rattus_norvegicus
ENSG00000137656BUD1310094.184ENSRBIG00000001857BUD1310094.184Rhinopithecus_bieti
ENSG00000137656BUD1310094.184ENSRROG00000034492BUD1310094.184Rhinopithecus_roxellana
ENSG00000137656BUD1310093.402ENSSBOG00000033988BUD1310093.402Saimiri_boliviensis_boliviensis
ENSG00000137656BUD1310063.419ENSSHAG00000001955-10063.578Sarcophilus_harrisii
ENSG00000137656BUD139950.476ENSSFOG00015005820si:dkeyp-69c1.69849.905Scleropages_formosus
ENSG00000137656BUD139953.606ENSSMAG00000010031si:dkeyp-69c1.69951.462Scophthalmus_maximus
ENSG00000137656BUD139950.547ENSSDUG00000004190si:dkeyp-69c1.69853.200Seriola_dumerili
ENSG00000137656BUD139952.481ENSSLDG00000017222si:dkeyp-69c1.69851.238Seriola_lalandi_dorsalis
ENSG00000137656BUD139150.282ENSSPUG00000005673BUD139951.154Sphenodon_punctatus
ENSG00000137656BUD139950.549ENSSPAG00000008190si:dkeyp-69c1.69849.634Stegastes_partitus
ENSG00000137656BUD139278.710ENSSSCG00000015065BUD1310078.871Sus_scrofa
ENSG00000137656BUD139252.316ENSTGUG00000000141-10054.197Taeniopygia_guttata
ENSG00000137656BUD139951.125ENSTRUG00000017101si:dkeyp-69c1.69951.012Takifugu_rubripes
ENSG00000137656BUD139947.818ENSTNIG00000009983si:dkeyp-69c1.69748.350Tetraodon_nigroviridis
ENSG00000137656BUD139995.025ENSTTRG00000011564BUD138895.025Tursiops_truncatus
ENSG00000137656BUD139577.052ENSUAMG00000019898BUD1310076.748Ursus_americanus
ENSG00000137656BUD1310078.086ENSUMAG00000003691BUD1310077.245Ursus_maritimus
ENSG00000137656BUD139092.115ENSVPAG00000007887BUD138892.500Vicugna_pacos
ENSG00000137656BUD1310065.073ENSVVUG00000025196BUD1310068.519Vulpes_vulpes
ENSG00000137656BUD139971.910ENSXETG00000003767bud138271.084Xenopus_tropicalis
ENSG00000137656BUD139949.133ENSXMAG00000010906si:dkeyp-69c1.69850.696Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome21873635.IBAProcess
GO:0000398mRNA splicing, via spliceosome29360106.IDAProcess
GO:0000398mRNA splicing, via spliceosome15565172.ISSProcess
GO:0003723RNA binding22658674.HDAFunction
GO:0005515protein binding22365833.25416956.IPIFunction
GO:0005634nucleus29360106.IDAComponent
GO:0005684U2-type spliceosomal complex21873635.IBAComponent
GO:0070274RES complex21873635.IBAComponent
GO:0070274RES complex15565172.ISSComponent
GO:0071005U2-type precatalytic spliceosome29360106.IDAComponent

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us