EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact
  • Basic Information
  • Cancer Related Information

  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000138434 (Gene tree)
Gene ID
6744
Gene Symbol
ITPRID2
Alias
CS-1|SPAG13|KRAP|KIAA1927|SSFA2
Full Name
ITPR interacting domain containing 2
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
39,023 bases
Position
chr2:181,891,716-181,930,738
Accession
11319
RBP type
non-canonical RBP
Summary
(ITPR Interacting Domain Containing 2) is a Protein Coding gene. An important paralog of this gene is ITPRID1.
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000480753ITPRID2-2122526--- (aa)--
ENST00000491866ITPRID2-214718--- (aa)--
ENST00000470654ITPRID2-211578--- (aa)--
ENST00000467172ITPRID2-209860--- (aa)--
ENST00000451836ITPRID2-207747-ENSP00000387420201 (aa)-H7BZ26
ENST00000409001ITPRID2-2024987XM_011511701ENSP000003873191237 (aa)XP_011510003E9PHV5
ENST00000440623ITPRID2-2065420-ENSP0000040375446 (aa)-F2Z295
ENST00000416081ITPRID2-2045067-ENSP0000041562546 (aa)-F2Z295
ENST00000495248ITPRID2-215219--- (aa)--
ENST00000491720ITPRID2-2136473--- (aa)--
ENST00000409136ITPRID2-2033610XM_011511702ENSP00000386916768 (aa)XP_011510004E7EUL7
ENST00000320370ITPRID2-2014965XM_005246813ENSP000003146691256 (aa)XP_005246870P28290
ENST00000454579ITPRID2-2083772-ENSP0000039204946 (aa)-F2Z295
ENST00000431877ITPRID2-2055150XM_005246812ENSP000003887311259 (aa)XP_005246869P28290
ENST00000470129ITPRID2-210269--- (aa)--
Gene Model
Click here to download ENSG00000138434's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000138434Cholesterol, HDL1.32137080766321E-617903299
ENSG00000138434Muscle, Skeletal8.9140000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000138434's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005102signaling receptor binding-IEAFunction
GO:0005634nucleus-IDAComponent
GO:0005829cytosol-IDAComponent
GO:0005886plasma membrane-IDAComponent
GO:0051015actin filament binding14673706.IDAFunction

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr2181922305Missense_MutationnovelP1190A0.12
BLCAchr2181915283Missense_MutationnovelS548L0.07
BLCAchr2181892663Splice_Regionnovel0.14
BLCAchr2181916527Intronnovel0.55
BLCAchr2181913850SilentnovelL498L0.22
BLCAchr2181915627Missense_MutationnovelL663V0.28
BLCAchr2181922263Missense_MutationnovelE1176Q0.15
BLCAchr2181902074Nonsense_MutationNAQ341*0.25
BLCAchr2181920594Splice_Regionnovel0.2
BRCAchr2181900750Missense_MutationNAN186K0.56
BRCAchr2181916745Intronnovel0.19
BRCAchr2181916227Missense_MutationnovelR863G0.08
BRCAchr2181900810Missense_MutationnovelN206K0.06
BRCAchr2181900811Missense_MutationnovelS207P0.06
BRCAchr2181918653Missense_MutationNAS948L0.38
BRCAchr21819295663'UTRNA0.35
BRCAchr2181922389Missense_MutationNAE1218K0.19
BRCAchr2181901892Missense_MutationNAT280K0.36
BRCAchr2181916165Missense_MutationNAS842C0.14
BRCAchr2181902051Missense_MutationNAE333A0.29
BRCAchr2181909958Silentrs143398479T491T0.2
BRCAchr2181916415Missense_MutationnovelQ925H0.1
CESCchr21819303723'UTRnovel0.19
CESCchr2181915494Missense_MutationNAI618M0.3
CESCchr2181901842SilentnovelT263T0.15
CESCchr21819297173'UTRrs5303669650.25
CESCchr2181922138Missense_MutationNAS1134L0.33
CESCchr21819298683'UTRnovel0.26
CESCchr2181916161Missense_MutationNAQ841E0.35
COADchr2181916034Silentrs771762488S798S0.38
COADchr2181902042Missense_MutationnovelS330L0.18
COADchr2181896925Nonsense_MutationnovelG109*0.34
COADchr2181919300Nonsense_MutationNAE1000*0.71
COADchr2181916513Intronnovel0.12
COADchr2181928237Missense_MutationNAA1251V0.29
COADchr2181916090Missense_Mutationrs16867510A817V0.4
COADchr2181922328SilentNAG1197G0.31
COADchr2181902176Missense_MutationNAD375H0.43
COADchr2181915914Frame_Shift_InsnovelS759Lfs*160.24
COADchr2181922407Missense_Mutationrs140527145R1224W0.3
COADchr2181916381Missense_MutationNAR914Q0.2
COADchr2181902169Missense_MutationNAE372D0.15
COADchr2181916015Missense_Mutationrs778799913G792D0.25
COADchr2181902165Missense_Mutationrs200685358T371M0.33
COADchr2181902071Missense_Mutationrs771689403D340N0.33
COADchr2181901947Frame_Shift_InsnovelL299Pfs*90.02
COADchr2181922050Frame_Shift_InsnovelS1107Ffs*370.15
COADchr2181928192Missense_Mutationrs760899439R1236Q0.39
COADchr2181915751Missense_MutationNAS704N0.38
DLBCchr2181922206Missense_MutationnovelP1157S0.24
ESCAchr21819301283'UTRnovel0.36
ESCAchr2181902181In_Frame_DelnovelD377_D381del0.22
ESCAchr21819301743'UTRnovel0.18
ESCAchr2181902351Missense_MutationnovelS433N0.11
ESCAchr21819305673'UTRnovel0.08
ESCAchr21819299343'UTRnovel0.42
GBMchr2181915677SilentnovelE679E0.04
GBMchr2181902138Missense_Mutationrs776527250E362V0.07
GBMchr2181902139Missense_Mutationrs761720342E362D0.07
GBMchr2181915910Missense_Mutationrs141383567R757Q0.25
GBMchr2181915503SilentnovelI621I0.1
HNSCchr2181900834Missense_MutationNAI214M0.23
HNSCchr2181916017Missense_MutationnovelQ793E0.15
HNSCchr2181918653Nonsense_MutationnovelS948*0.4
HNSCchr2181899062SilentnovelG151G0.16
HNSCchr2181922263Missense_MutationnovelE1176Q0.16
HNSCchr2181915840Missense_MutationnovelL734V0.2
HNSCchr2181902306Missense_MutationnovelD418G0.14
HNSCchr2181915250Missense_MutationnovelA537V0.46
HNSCchr2181916509Intronnovel0.2
HNSCchr2181916510Intronnovel0.2
HNSCchr2181918840Missense_Mutationrs369300058R984H0.24
HNSCchr2181902293Missense_MutationnovelE414Q0.23
HNSCchr2181919446Missense_MutationnovelM1048I0.33
KIRCchr2181909956Missense_MutationNAT491A0.26
KIRCchr21819297303'UTRnovel0.02
KIRCchr2181892645Nonsense_MutationNAW81*0.23
KIRCchr2181918867Missense_MutationnovelM993R0.2
KIRCchr2181902245Missense_MutationNAE398Q0.17
KIRPchr2181909923Missense_MutationNAP480A0.43
KIRPchr2181916124SilentNAT828T0.43
KIRPchr2181922033Missense_MutationNAG1099A0.24
KIRPchr2181900706SilentNAL172L0.18
KIRPchr2181900890Frame_Shift_InsnovelY234Lfs*110.24
LGGchr2181918633In_Frame_DelnovelP942_V950del0.14
LGGchr2181915950SilentnovelS770S0.1
LIHCchr2181916528Intronnovel0.32
LUADchr2181901919Missense_MutationNAS289T0.31
LUADchr2181918787SilentnovelR966R0.33
LUADchr21819296103'UTRnovel0.15
LUADchr2181915697Missense_MutationNAS686F0.32
LUADchr2181909889Splice_SitenovelX472_splice0.06
LUADchr2181902464Missense_MutationnovelE471Q0.06
LUADchr2181922278Missense_MutationnovelA1181P0.24
LUADchr2181915551SilentNAL637L0.12
LUADchr2181901916Missense_MutationnovelR288L0.21
LUADchr2181901917SilentnovelR288R0.21
LUADchr2181922378Missense_MutationnovelV1214A0.29
LUADchr2181909910Silentrs771071833T475T0.07
LUADchr2181918872Missense_MutationNAE995K0.28
LUADchr21819297023'UTRnovel0.26
LUADchr2181922160SilentnovelP1141P0.16
LUADchr2181916427Missense_MutationnovelQ929H0.09
LUADchr2181915412Frame_Shift_DelnovelS591*0.08
LUADchr2181921981Nonsense_MutationnovelK1082*0.72
LUADchr2181915481Missense_MutationNAP614L0.16
LUADchr2181915249Missense_MutationNAA537S0.15
LUADchr2181901795Missense_MutationnovelT248S0.83
LUADchr2181896028Splice_SitenovelX86_splice0.18
LUADchr2181915847Missense_MutationnovelR736M0.25
LUADchr2181915215Splice_SiteNAX526_splice0.12
LUSCchr2181918872Missense_MutationNAE995K0.08
LUSCchr2181916019Missense_MutationnovelQ793H0.3
LUSCchr2181915513Nonsense_MutationnovelE625*0.36
LUSCchr2181922328Silentrs769638770G1197G0.17
LUSCchr2181922351Missense_MutationNAP1205L0.14
LUSCchr2181902396Frame_Shift_InsnovelC448Wfs*650.05
LUSCchr2181902071Missense_MutationNAD340Y0.14
LUSCchr2181915484Missense_Mutationrs141978094G615E0.2
LUSCchr2181916002Missense_MutationNAM788L0.14
LUSCchr2181909915Missense_MutationNAG477V0.3
LUSCchr2181901888Nonsense_MutationNAE279*0.28
LUSCchr2181915959SilentnovelY773Y0.18
LUSCchr2181915759Missense_MutationnovelN707H0.57
LUSCchr2181915589Missense_MutationnovelS650N0.45
LUSCchr2181892689Intronnovel0.59
LUSCchr2181915536SilentNAE632E0.35
LUSCchr2181899082Missense_MutationNAG158V0.28
LUSCchr2181915814Missense_MutationnovelY725F0.4
OVchr2181915402Frame_Shift_DelnovelR589Ifs*30.18
OVchr2181913871Missense_MutationNAH505N0.42
OVchr2181916044Missense_MutationnovelI802F0.08
OVchr2181902074Missense_MutationnovelQ341E0.09
OVchr2181916803Intronnovel0.67
OVchr2181922316Missense_MutationnovelE1193D0.14
OVchr2181900861Missense_MutationNAQ223H0.2
OVchr2181915435Missense_MutationnovelC599S0.04
PAADchr2181916284Missense_MutationnovelA882S0.23
PAADchr2181916415Missense_MutationnovelQ925H0.18
PAADchr2181918809Nonsense_MutationnovelQ974*0.17
PAADchr21819297333'UTRnovel0.05
PRADchr2181901809Silentrs145637080A252A0.38
READchr2181918821Missense_MutationNAL978V0.09
READchr2181902454Silentrs763088774F467F0.26
READchr2181909958Silentrs143398479T491T0.4
READchr2181892634Missense_MutationnovelK77N0.26
READchr2181915796Missense_MutationnovelD719A0.18
READchr2181918613Nonsense_MutationnovelG935*0.08
SARCchr2181922061SilentnovelQ1108Q0.28
SKCMchr2181916050Missense_Mutationrs540962657P804S0.31
SKCMchr2181915927Missense_MutationNAE763K0.39
SKCMchr2181902042Nonsense_MutationnovelS330*0.1
SKCMchr2181902283SilentNAS410S0.38
SKCMchr2181902032SilentnovelL327L0.32
SKCMchr2181916153Missense_MutationNAP838L0.27
SKCMchr2181916283Silentrs764295454F881F0.08
SKCMchr2181901774Missense_Mutationrs192229678R241C0.92
SKCMchr2181901774Missense_Mutationrs192229678R241C0.37
SKCMchr2181902151SilentNAS366S0.43
SKCMchr2181915218Splice_RegionNAV526V0.6
SKCMchr2181900818Missense_MutationNAS209F0.31
SKCMchr2181901835Missense_MutationNAS261F0.33
SKCMchr2181916204Missense_Mutationrs761238500E855G0.28
SKCMchr2181922245Missense_Mutationrs750129010P1170S0.39
SKCMchr2181922246Missense_MutationnovelP1170L0.37
SKCMchr2181916187SilentNAI849I0.45
SKCMchr2181922057Missense_MutationnovelS1107F0.23
SKCMchr2181918653Missense_MutationNAS948L0.42
SKCMchr2181922298SilentNAV1187V0.23
SKCMchr2181919418Missense_Mutationrs555805993P1039L0.42
SKCMchr2181915553Missense_MutationnovelR638K0.59
SKCMchr2181901765Splice_SiteNAX238_splice0.08
STADchr2181916223Missense_MutationnovelH861Q0.04
STADchr2181916096Missense_Mutationrs779882988R819Q0.15
STADchr2181915519Missense_MutationnovelD627Y0.13
STADchr2181919412Missense_Mutationrs150716378R1037H0.38
STADchr2181899016Missense_MutationNAN136I0.17
STADchr2181922051Frame_Shift_DelnovelS1107Pfs*360.39
STADchr2181899027Missense_MutationNAA140T0.24
STADchr2181901775Missense_MutationNAR241H0.26
STADchr2181902186Missense_MutationnovelR378I0.37
STADchr2181916280SilentnovelA880A0.13
STADchr2181916095Missense_Mutationrs112676123R819W0.14
STADchr21819296283'UTRnovel0.26
STADchr2181918676Splice_SitenovelX956_splice0.25
STADchr2181919438Missense_Mutationrs774758622A1046T0.16
STADchr2181916125Frame_Shift_DelnovelT830Vfs*350.43
STADchr2181919434SilentNAS1044S0.32
STADchr2181922204Missense_Mutationrs145518704T1156M0.36
STADchr2181915597Nonsense_MutationnovelE653*0.32
STADchr2181918777Missense_MutationNAV963A0.47
THCAchr2181902283Frame_Shift_InsnovelG411Ffs*70.05
UCECchr2181915775Missense_Mutationrs141071333R712H0.14
UCECchr21819282693'UTRnovel0.48
UCECchr2181915284SilentnovelS548S0.43
UCECchr2181922167Missense_MutationnovelA1144T0.34
UCECchr21819301443'UTRnovel0.07
UCECchr2181899020SilentnovelN137N0.26
UCECchr2181909958Silentrs143398479T491T0.48
UCECchr2181901842SilentnovelT263T0.43
UCECchr2181928169Silentrs544408429E1228E0.25
UCECchr2181915465Nonsense_MutationNAQ609*0.26
UCECchr2181916284Missense_Mutationrs765566356A882T0.52
UCECchr2181909958Silentrs143398479T491T0.14
UCECchr2181892235Missense_MutationnovelE57K0.15
UCECchr21819304453'UTRnovel0.14
UCECchr2181921981Missense_MutationNAK1082E0.54
UCECchr2181902086Missense_MutationnovelK345Q0.62
UCECchr2181901985Missense_MutationnovelK311T0.32
UCECchr2181928195Missense_MutationnovelE1237G0.3
UCECchr21819298323'UTRnovel0.29
UCECchr2181915996Missense_Mutationrs781661868R786W0.08
UCECchr21819298593'UTRnovel0.33
UCECchr2181920618Missense_Mutationrs1131495A1056T0.29
UCECchr2181915280Missense_MutationNAT547M0.34
UCECchr2181919411Missense_Mutationrs771813501R1037C0.67
UCECchr2181909958Silentrs143398479T491T0.44
UCECchr2181918618Silentrs112552248P936P0.21
UCECchr2181918836Missense_MutationnovelL983V0.4
UCECchr2181922051Frame_Shift_DelnovelS1107Pfs*360.39
UCECchr2181901981Missense_MutationnovelE310K0.33
UCECchr2181901809Silentrs145637080A252A0.53
UCECchr21819305933'UTRnovel0.1
UCECchr21819307253'UTRnovel0.64
UCECchr2181916368Nonsense_MutationnovelE910*0.33
UCECchr21819304593'UTRrs1415239510.4
UCECchr2181915910Missense_Mutationrs141383567R757Q0.32
UCECchr21819305373'UTRnovel0.34
UCECchr2181919438Missense_Mutationrs774758622A1046T0.32
UCECchr2181900720Silentrs531657002Y176Y0.2
UCECchr2181902455Missense_MutationnovelE468K0.37
UCECchr2181919325Missense_MutationnovelR1008I0.14
UCECchr21819297243'UTRnovel0.17
UCECchr2181919376Missense_MutationnovelR1025H0.38
UCECchr2181915984Missense_MutationnovelE782K0.37
UCECchr21819305073'UTRnovel0.12
UCECchr21819302783'UTRnovel0.29
UCECchr2181913857Missense_Mutationrs779124967R500H0.46
UCECchr2181916336Missense_Mutationrs759709689R899Q0.38
UCECchr21819296563'UTRnovel0.24
UCECchr2181916380Nonsense_MutationNAR914*0.44
UCECchr2181915910Missense_Mutationrs141383567R757Q0.29
UCECchr2181915472Missense_MutationnovelT611I0.4
UCECchr21819306183'UTRnovel0.28
UCECchr2181920663Splice_Siters777082632X1070_splice0.28
UCECchr2181916380Nonsense_MutationNAR914*0.33
UCECchr2181922198Missense_MutationnovelA1154D0.06
UCECchr2181892628SilentnovelN75N0.32
UCECchr2181916074Frame_Shift_Insrs751930387Q814Pfs*30.36
UCECchr2181922233Missense_MutationnovelV1166M0.35
UCECchr2181915499Missense_MutationNAE620G0.44
UCECchr2181928179Missense_MutationnovelG1232W0.22
UCECchr2181902455Missense_MutationnovelE468K0.45
UCECchr2181916803Intronnovel0.5
UCECchr2181913876Silentrs747013734S506S0.38
UCECchr2181915436Missense_MutationnovelC599Y0.27
UCECchr2181918864Missense_MutationnovelH992R0.18
UCECchr2181899040Missense_MutationnovelR144I0.45
UCECchr21819299503'UTRnovel0.75
UCECchr2181902468Splice_SiteNAX471_splice0.25
UCECchr2181915474Missense_MutationnovelC612R0.35
UCECchr2181928222Missense_MutationnovelV1246A0.41
UCECchr21819304553'UTRnovel0.48
UCECchr2181899094Missense_MutationNAS162N0.21
UCECchr2181916208SilentNAR856R0.37
UCECchr2181916315Missense_MutationnovelR892K0.31
UCECchr2181916183Missense_Mutationrs754804783S848F0.43
UCECchr21819305633'UTRnovel0.33
UCSchr2181902457Missense_MutationnovelE468D0.44

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
CESCAMP0.11860.012962
PAADAMP0.05980.1091
PAADDEL0.02720.2014

Survival Analysis
CancerP-value Q-value
SKCM0.011

Kaplan-Meier Survival Analysis

PRAD0.02

Kaplan-Meier Survival Analysis

ESCA0.029

Kaplan-Meier Survival Analysis

COAD0.042

Kaplan-Meier Survival Analysis

PAAD0.0011

Kaplan-Meier Survival Analysis

BLCA0.00074

Kaplan-Meier Survival Analysis

KICH0.048

Kaplan-Meier Survival Analysis

GBM0.04

Kaplan-Meier Survival Analysis

LUAD0.028

Kaplan-Meier Survival Analysis

OV0.016

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us