EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000143436 (Gene tree)
Gene ID: 65005
Gene Symbol: MRPL9
Alias: N
Full Name: mitochondrial ribosomal protein L9
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 4,274 bases
Position: chr1:151,759,643-151,763,916
Accession: 14277
RBP type: canonical RBP
Summary: This is a nuclear gene encoding a protein component of the 39S subunit of the mitochondrial ribosome. Alternative splicing results in multiple transcript variants. A pseudogene of this gene is found on chromosome 8. [provided by RefSeq, Jul 2014]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000491640	Ribosomal_L9_N	PF01281.19	4.5e-16	1	1
ENSP00000357823	Ribosomal_L9_N	PF01281.19	1e-15	1	1
ENSP00000357822	Ribosomal_L9_N	PF01281.19	1e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000481777	MRPL9-208	390	-	ENSP00000491640	130 (aa)	-	A0A1W2PQB6
ENST00000461182	MRPL9-203	348	-	-	- (aa)	-	-
ENST00000467306	MRPL9-205	1264	-	ENSP00000492374	122 (aa)	-	A0A1W2PRK9
ENST00000468006	MRPL9-206	531	-	-	- (aa)	-	-
ENST00000495867	MRPL9-211	403	-	-	- (aa)	-	-
ENST00000368830	MRPL9-202	1296	-	ENSP00000357823	267 (aa)	-	Q9BYD2
ENST00000368829	MRPL9-201	882	-	ENSP00000357822	233 (aa)	-	Q5SZR1
ENST00000478926	MRPL9-207	581	-	ENSP00000492707	153 (aa)	-	A0A1W2PS92
ENST00000492684	MRPL9-210	364	-	ENSP00000491506	87 (aa)	-	A0A1W2PPE5
ENST00000462783	MRPL9-204	693	-	-	- (aa)	-	-
ENST00000486707	MRPL9-209	503	-	ENSP00000491449	77 (aa)	-	A0A1W2PPK1

Gene Model

Click here to download ENSG00000143436's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000143436's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000143436	MRPL9	95	64.286	ENSAPOG00000000834	mrpl9	70	59.000	Acanthochromis_polyacanthus
ENSG00000143436	MRPL9	95	91.566	ENSAMEG00000000491	MRPL9	96	84.766	Ailuropoda_melanoleuca
ENSG00000143436	MRPL9	75	70.769	ENSACIG00000002519	mrpl9	76	55.682	Amphilophus_citrinellus
ENSG00000143436	MRPL9	95	65.476	ENSAOCG00000020766	mrpl9	75	56.561	Amphiprion_ocellaris
ENSG00000143436	MRPL9	95	65.476	ENSAPEG00000007650	mrpl9	75	56.561	Amphiprion_percula
ENSG00000143436	MRPL9	95	63.095	ENSATEG00000010505	mrpl9	72	55.111	Anabas_testudineus
ENSG00000143436	MRPL9	76	72.727	ENSACAG00000008908	MRPL9	96	69.608	Anolis_carolinensis
ENSG00000143436	MRPL9	98	95.294	ENSANAG00000022559	MRPL9	99	91.729	Aotus_nancymaae
ENSG00000143436	MRPL9	95	65.476	ENSACLG00000010920	mrpl9	77	56.000	Astatotilapia_calliptera
ENSG00000143436	MRPL9	95	60.714	ENSAMXG00000041268	mrpl9	85	58.852	Astyanax_mexicanus
ENSG00000143436	MRPL9	98	91.765	ENSBTAG00000000797	MRPL9	97	80.531	Bos_taurus
ENSG00000143436	MRPL9	98	92.941	ENSCJAG00000007926	MRPL9	99	91.729	Callithrix_jacchus
ENSG00000143436	MRPL9	89	90.083	ENSCAFG00020009687	-	98	58.514	Canis_lupus_dingo
ENSG00000143436	MRPL9	93	83.951	ENSCAFG00020015940	-	80	78.475	Canis_lupus_dingo
ENSG00000143436	MRPL9	98	91.765	ENSCHIG00000011797	MRPL9	93	88.306	Capra_hircus
ENSG00000143436	MRPL9	98	90.588	ENSTSYG00000006296	MRPL9	99	87.218	Carlito_syrichta
ENSG00000143436	MRPL9	98	90.588	ENSCPOG00000021168	MRPL9	96	83.588	Cavia_porcellus
ENSG00000143436	MRPL9	98	95.294	ENSCCAG00000021688	MRPL9	100	92.632	Cebus_capucinus
ENSG00000143436	MRPL9	100	93.258	ENSCATG00000043909	MRPL9	100	93.258	Cercocebus_atys
ENSG00000143436	MRPL9	98	87.059	ENSCLAG00000000458	MRPL9	99	83.459	Chinchilla_lanigera
ENSG00000143436	MRPL9	98	94.118	ENSCSAG00000001816	MRPL9	82	92.952	Chlorocebus_sabaeus
ENSG00000143436	MRPL9	93	92.593	ENSCHOG00000000258	-	99	80.269	Choloepus_hoffmanni
ENSG00000143436	MRPL9	97	94.048	ENSCHOG00000007166	-	99	79.503	Choloepus_hoffmanni
ENSG00000143436	MRPL9	95	73.494	ENSCPBG00000008844	MRPL9	87	75.771	Chrysemys_picta_bellii
ENSG00000143436	MRPL9	100	94.007	ENSCANG00000037263	MRPL9	100	94.007	Colobus_angolensis_palliatus
ENSG00000143436	MRPL9	98	88.235	ENSCGRG00001017649	Mrpl9	99	82.331	Cricetulus_griseus_chok1gshd
ENSG00000143436	MRPL9	98	88.235	ENSCGRG00000007695	Mrpl9	94	75.556	Cricetulus_griseus_crigri
ENSG00000143436	MRPL9	95	55.952	ENSCSEG00000006967	mrpl9	65	53.500	Cynoglossus_semilaevis
ENSG00000143436	MRPL9	95	61.905	ENSCVAG00000013421	mrpl9	70	57.000	Cyprinodon_variegatus
ENSG00000143436	MRPL9	98	56.154	ENSDARG00000063249	mrpl9	82	58.128	Danio_rerio
ENSG00000143436	MRPL9	98	92.941	ENSDNOG00000011403	-	99	84.270	Dasypus_novemcinctus
ENSG00000143436	MRPL9	95	68.675	ENSDNOG00000033935	-	99	59.908	Dasypus_novemcinctus
ENSG00000143436	MRPL9	98	89.412	ENSDORG00000015320	Mrpl9	99	84.791	Dipodomys_ordii
ENSG00000143436	MRPL9	98	85.882	ENSETEG00000016013	MRPL9	99	80.989	Echinops_telfairi
ENSG00000143436	MRPL9	98	92.941	ENSEASG00005005246	MRPL9	99	88.258	Equus_asinus_asinus
ENSG00000143436	MRPL9	98	91.765	ENSECAG00000016263	MRPL9	99	87.879	Equus_caballus
ENSG00000143436	MRPL9	95	61.905	ENSELUG00000014367	mrpl9	89	49.115	Esox_lucius
ENSG00000143436	MRPL9	95	90.361	ENSFCAG00000043355	MRPL9	98	86.454	Felis_catus
ENSG00000143436	MRPL9	92	86.250	ENSFDAG00000008439	MRPL9	99	80.488	Fukomys_damarensis
ENSG00000143436	MRPL9	95	55.952	ENSFHEG00000010344	mrpl9	76	51.818	Fundulus_heteroclitus
ENSG00000143436	MRPL9	95	65.882	ENSGMOG00000016956	mrpl9	84	60.199	Gadus_morhua
ENSG00000143436	MRPL9	95	73.494	ENSGALG00000042941	MRPL9	88	72.897	Gallus_gallus
ENSG00000143436	MRPL9	95	64.286	ENSGAFG00000006437	mrpl9	69	58.000	Gambusia_affinis
ENSG00000143436	MRPL9	94	66.265	ENSGACG00000004192	mrpl9	83	57.921	Gasterosteus_aculeatus
ENSG00000143436	MRPL9	95	72.289	ENSGAGG00000019667	MRPL9	67	75.281	Gopherus_agassizii
ENSG00000143436	MRPL9	100	99.625	ENSGGOG00000001902	MRPL9	100	99.625	Gorilla_gorilla
ENSG00000143436	MRPL9	95	65.476	ENSHBUG00000021568	mrpl9	77	56.000	Haplochromis_burtoni
ENSG00000143436	MRPL9	100	79.775	ENSHGLG00000004827	MRPL9	99	79.775	Heterocephalus_glaber_female
ENSG00000143436	MRPL9	91	88.608	ENSHGLG00100009279	MRPL9	99	79.401	Heterocephalus_glaber_male
ENSG00000143436	MRPL9	95	61.905	ENSHCOG00000020724	mrpl9	83	55.300	Hippocampus_comes
ENSG00000143436	MRPL9	95	60.714	ENSIPUG00000011538	mrpl9	84	60.096	Ictalurus_punctatus
ENSG00000143436	MRPL9	97	72.619	ENSSTOG00000020141	-	90	80.088	Ictidomys_tridecemlineatus
ENSG00000143436	MRPL9	95	61.905	ENSKMAG00000010267	mrpl9	81	55.455	Kryptolebias_marmoratus
ENSG00000143436	MRPL9	95	64.286	ENSLBEG00000025373	mrpl9	71	55.140	Labrus_bergylta
ENSG00000143436	MRPL9	94	53.226	ENSLBEG00000019811	mrpl9	82	50.847	Labrus_bergylta
ENSG00000143436	MRPL9	95	71.429	ENSLACG00000002611	MRPL9	90	63.229	Latimeria_chalumnae
ENSG00000143436	MRPL9	81	78.605	ENSLAFG00000028346	-	99	78.605	Loxodonta_africana
ENSG00000143436	MRPL9	98	90.588	ENSLAFG00000006271	-	99	85.393	Loxodonta_africana
ENSG00000143436	MRPL9	100	93.633	ENSMFAG00000000874	MRPL9	100	93.633	Macaca_fascicularis
ENSG00000143436	MRPL9	100	94.007	ENSMMUG00000009094	MRPL9	100	94.007	Macaca_mulatta
ENSG00000143436	MRPL9	100	94.757	ENSMNEG00000020504	MRPL9	100	94.757	Macaca_nemestrina
ENSG00000143436	MRPL9	100	94.007	ENSMLEG00000043239	MRPL9	100	94.007	Mandrillus_leucophaeus
ENSG00000143436	MRPL9	95	65.476	ENSMAMG00000016085	mrpl9	71	54.587	Mastacembelus_armatus
ENSG00000143436	MRPL9	95	65.476	ENSMZEG00005026632	mrpl9	77	56.000	Maylandia_zebra
ENSG00000143436	MRPL9	66	73.684	ENSMGAG00000003256	MRPL9	94	74.510	Meleagris_gallopavo
ENSG00000143436	MRPL9	98	88.235	ENSMAUG00000019833	Mrpl9	99	82.576	Mesocricetus_auratus
ENSG00000143436	MRPL9	98	89.412	ENSMICG00000010669	MRPL9	99	88.346	Microcebus_murinus
ENSG00000143436	MRPL9	98	87.059	ENSMOCG00000002992	Mrpl9	99	82.576	Microtus_ochrogaster
ENSG00000143436	MRPL9	95	63.095	ENSMMOG00000017931	mrpl9	83	54.315	Mola_mola
ENSG00000143436	MRPL9	95	69.048	ENSMALG00000008112	mrpl9	75	56.710	Monopterus_albus
ENSG00000143436	MRPL9	97	88.095	MGP_CAROLIEiJ_G0025312	Mrpl9	99	81.273	Mus_caroli
ENSG00000143436	MRPL9	97	88.095	ENSMUSG00000028140	Mrpl9	99	82.022	Mus_musculus
ENSG00000143436	MRPL9	98	87.059	MGP_PahariEiJ_G0026755	Mrpl9	99	81.648	Mus_pahari
ENSG00000143436	MRPL9	97	88.095	MGP_SPRETEiJ_G0026254	Mrpl9	99	80.899	Mus_spretus
ENSG00000143436	MRPL9	95	91.566	ENSMPUG00000003590	MRPL9	99	85.882	Mustela_putorius_furo
ENSG00000143436	MRPL9	98	90.588	ENSMLUG00000002204	MRPL9	96	85.441	Myotis_lucifugus
ENSG00000143436	MRPL9	97	86.905	ENSNGAG00000010578	Mrpl9	99	81.818	Nannospalax_galili
ENSG00000143436	MRPL9	95	64.286	ENSNBRG00000015276	mrpl9	78	54.667	Neolamprologus_brichardi
ENSG00000143436	MRPL9	100	97.753	ENSNLEG00000010275	MRPL9	100	97.753	Nomascus_leucogenys
ENSG00000143436	MRPL9	94	71.951	ENSMEUG00000006109	MRPL9	94	76.033	Notamacropus_eugenii
ENSG00000143436	MRPL9	96	79.767	ENSOPRG00000016025	MRPL9	98	78.707	Ochotona_princeps
ENSG00000143436	MRPL9	100	80.150	ENSODEG00000010962	MRPL9	99	80.150	Octodon_degus
ENSG00000143436	MRPL9	95	65.476	ENSONIG00000019778	mrpl9	77	56.000	Oreochromis_niloticus
ENSG00000143436	MRPL9	98	91.765	ENSOCUG00000001383	MRPL9	99	86.466	Oryctolagus_cuniculus
ENSG00000143436	MRPL9	95	64.286	ENSORLG00000026444	mrpl9	82	55.022	Oryzias_latipes
ENSG00000143436	MRPL9	95	64.286	ENSORLG00015009701	mrpl9	82	57.292	Oryzias_latipes_hsok
ENSG00000143436	MRPL9	95	59.524	ENSOMEG00000005486	mrpl9	88	51.837	Oryzias_melastigma
ENSG00000143436	MRPL9	98	92.941	ENSOGAG00000001834	-	99	86.364	Otolemur_garnettii
ENSG00000143436	MRPL9	98	83.529	ENSOGAG00000030456	-	99	79.775	Otolemur_garnettii
ENSG00000143436	MRPL9	98	90.588	ENSOARG00000021042	MRPL9	100	83.895	Ovis_aries
ENSG00000143436	MRPL9	100	100.000	ENSPPAG00000016172	MRPL9	100	100.000	Pan_paniscus
ENSG00000143436	MRPL9	95	89.157	ENSPPRG00000003556	MRPL9	98	85.657	Panthera_pardus
ENSG00000143436	MRPL9	95	89.157	ENSPTIG00000017020	MRPL9	96	80.934	Panthera_tigris_altaica
ENSG00000143436	MRPL9	100	100.000	ENSPTRG00000001295	MRPL9	100	100.000	Pan_troglodytes
ENSG00000143436	MRPL9	100	93.258	ENSPANG00000008737	MRPL9	100	93.258	Papio_anubis
ENSG00000143436	MRPL9	79	68.571	ENSPKIG00000021327	mrpl9	89	60.000	Paramormyrops_kingsleyae
ENSG00000143436	MRPL9	95	74.699	ENSPSIG00000007207	MRPL9	99	77.830	Pelodiscus_sinensis
ENSG00000143436	MRPL9	95	67.857	ENSPMGG00000021557	mrpl9	82	57.635	Periophthalmus_magnuspinnatus
ENSG00000143436	MRPL9	98	89.412	ENSPEMG00000011374	Mrpl9	99	84.270	Peromyscus_maniculatus_bairdii
ENSG00000143436	MRPL9	87	80.087	ENSPCIG00000021194	-	95	80.087	Phascolarctos_cinereus
ENSG00000143436	MRPL9	94	68.293	ENSPCIG00000023550	-	82	76.526	Phascolarctos_cinereus
ENSG00000143436	MRPL9	94	67.470	ENSPFOG00000007514	mrpl9	69	58.000	Poecilia_formosa
ENSG00000143436	MRPL9	94	67.470	ENSPLAG00000011446	mrpl9	69	57.500	Poecilia_latipinna
ENSG00000143436	MRPL9	94	67.470	ENSPMEG00000010560	mrpl9	69	58.000	Poecilia_mexicana
ENSG00000143436	MRPL9	75	73.846	ENSPREG00000012577	mrpl9	67	56.831	Poecilia_reticulata
ENSG00000143436	MRPL9	100	99.251	ENSPPYG00000000857	MRPL9	100	99.251	Pongo_abelii
ENSG00000143436	MRPL9	98	89.412	ENSPCOG00000006826	MRPL9	99	88.346	Propithecus_coquereli
ENSG00000143436	MRPL9	82	90.141	ENSPVAG00000005232	-	98	78.472	Pteropus_vampyrus
ENSG00000143436	MRPL9	95	65.476	ENSPNYG00000009390	mrpl9	77	56.444	Pundamilia_nyererei
ENSG00000143436	MRPL9	95	63.095	ENSPNAG00000025239	mrpl9	89	60.094	Pygocentrus_nattereri
ENSG00000143436	MRPL9	98	89.412	ENSRNOG00000020869	mrpl9	96	82.609	Rattus_norvegicus
ENSG00000143436	MRPL9	100	94.757	ENSRBIG00000036937	MRPL9	100	94.757	Rhinopithecus_bieti
ENSG00000143436	MRPL9	100	94.757	ENSRROG00000031111	MRPL9	100	94.757	Rhinopithecus_roxellana
ENSG00000143436	MRPL9	98	96.471	ENSSBOG00000018541	MRPL9	99	93.609	Saimiri_boliviensis_boliviensis
ENSG00000143436	MRPL9	93	68.651	ENSSHAG00000015810	MRPL9	97	68.651	Sarcophilus_harrisii
ENSG00000143436	MRPL9	95	63.529	ENSSFOG00015008036	mrpl9	84	60.550	Scleropages_formosus
ENSG00000143436	MRPL9	95	63.095	ENSSMAG00000004399	mrpl9	70	54.585	Scophthalmus_maximus
ENSG00000143436	MRPL9	95	59.524	ENSSDUG00000014433	mrpl9	78	56.983	Seriola_dumerili
ENSG00000143436	MRPL9	95	59.524	ENSSLDG00000015665	mrpl9	71	53.182	Seriola_lalandi_dorsalis
ENSG00000143436	MRPL9	95	68.675	ENSSPUG00000002439	MRPL9	90	66.102	Sphenodon_punctatus
ENSG00000143436	MRPL9	95	61.905	ENSSPAG00000019185	mrpl9	61	58.000	Stegastes_partitus
ENSG00000143436	MRPL9	97	92.857	ENSSSCG00000028343	MRPL9	99	84.644	Sus_scrofa
ENSG00000143436	MRPL9	95	64.286	ENSTRUG00000025906	mrpl9	81	51.261	Takifugu_rubripes
ENSG00000143436	MRPL9	95	61.905	ENSTNIG00000017532	mrpl9	84	50.000	Tetraodon_nigroviridis
ENSG00000143436	MRPL9	98	92.941	ENSTBEG00000010836	MRPL9	99	85.338	Tupaia_belangeri
ENSG00000143436	MRPL9	98	89.412	ENSTTRG00000003147	MRPL9	99	86.730	Tursiops_truncatus
ENSG00000143436	MRPL9	95	93.976	ENSUAMG00000019587	MRPL9	76	85.271	Ursus_americanus
ENSG00000143436	MRPL9	95	93.976	ENSUMAG00000001723	MRPL9	80	93.069	Ursus_maritimus
ENSG00000143436	MRPL9	67	91.379	ENSVPAG00000000664	MRPL9	99	90.741	Vicugna_pacos
ENSG00000143436	MRPL9	95	87.952	ENSVVUG00000013099	MRPL9	94	83.636	Vulpes_vulpes
ENSG00000143436	MRPL9	95	67.857	ENSXCOG00000019845	mrpl9	92	56.338	Xiphophorus_couchianus
ENSG00000143436	MRPL9	95	67.857	ENSXMAG00000028983	mrpl9	80	57.277	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22681889.	HDA	Function
GO:0003735	structural constituent of ribosome	11543634.	NAS	Function
GO:0005515	protein binding	25416956.	IPI	Function
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	28892042.	IDA	Component
GO:0005743	mitochondrial inner membrane	-	TAS	Component
GO:0005761	mitochondrial ribosome	11543634.	NAS	Component
GO:0005762	mitochondrial large ribosomal subunit	25278503.28892042.	IDA	Component
GO:0006412	translation	11543634.	NAS	Process
GO:0070125	mitochondrial translational elongation	-	TAS	Process
GO:0070126	mitochondrial translational termination	-	TAS	Process