EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000148606 (Gene tree)
Gene ID
11128
Gene Symbol
POLR3A
Alias
RPC1|RPC155|hRPC155
Full Name
RNA polymerase III subunit A
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
60,295 bases
Position
chr10:77,969,251-78,029,545
Accession
30074
RBP type
canonical RBP
Summary
The protein encoded by this gene is the catalytic component of RNA polymerase III, which synthesizes small RNAs. The encoded protein also acts as a sensor to detect foreign DNA and trigger an innate immune response. [provided by RefSeq, Aug 2011]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000361446RNA_pol_Rpb1_5PF04998.171.3e-8811
ENSP00000483738RNA_pol_Rpb1_5PF04998.171.3e-2211
ENSP00000361446RNA_pol_Rpb1_4PF05000.171.9e-3111
ENSP00000361446RNA_pol_Rpb1_2PF00623.205.3e-7511
ENSP00000361446RNA_pol_Rpb1_3PF04983.181.2e-4111
ENSP00000361446RNA_pol_Rpb1_1PF04997.127.4e-9711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000372371POLR3A-2016640-ENSP000003614461390 (aa)-O14802
ENST00000472014POLR3A-202699--- (aa)--
ENST00000484760POLR3A-2041859--- (aa)--
ENST00000473588POLR3A-2031022-ENSP00000473389199 (aa)-R4GMX2
ENST00000616246POLR3A-2051668-ENSP00000483738162 (aa)-Q7Z755
Gene Model
Click here to download ENSG00000148606's gene model file
Pathways
Pathway IDPathway NameSource
hsa03020RNA polymeraseKEGG
hsa04623Cytosolic DNA-sensing pathwayKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000148606Platelet Function Tests8.0900000E-006-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000148606's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000148606POLR3A8145.342ENSG00000181222POLR2A9637.634
ENSG00000148606POLR3A9438.916ENSG00000068654POLR1A6532.902
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000148606POLR3A9586.842ENSAPOG00000022727polr3a9986.179Acanthochromis_polyacanthus
ENSG00000148606POLR3A9892.405ENSAPOG00000017553-9493.038Acanthochromis_polyacanthus
ENSG00000148606POLR3A10098.492ENSAMEG00000017801POLR3A10098.492Ailuropoda_melanoleuca
ENSG00000148606POLR3A9390.517ENSACIG00000024504polr3a9790.517Amphilophus_citrinellus
ENSG00000148606POLR3A10087.194ENSAOCG00000003949-10087.194Amphiprion_ocellaris
ENSG00000148606POLR3A7179.130ENSAOCG00000019295-9477.778Amphiprion_ocellaris
ENSG00000148606POLR3A10090.504ENSAOCG00000002071polr3a10090.504Amphiprion_ocellaris
ENSG00000148606POLR3A5988.542ENSAOCG00000004721-7488.542Amphiprion_ocellaris
ENSG00000148606POLR3A8079.845ENSAOCG00000021484-9579.845Amphiprion_ocellaris
ENSG00000148606POLR3A5988.542ENSAOCG00000011482-7588.542Amphiprion_ocellaris
ENSG00000148606POLR3A8072.308ENSAOCG00000011392-9672.308Amphiprion_ocellaris
ENSG00000148606POLR3A7575.806ENSAPEG00000004431-7875.806Amphiprion_percula
ENSG00000148606POLR3A7575.806ENSAPEG00000001594-7875.806Amphiprion_percula
ENSG00000148606POLR3A7575.806ENSAPEG00000004452-7875.806Amphiprion_percula
ENSG00000148606POLR3A7478.333ENSAPEG00000011670-8378.333Amphiprion_percula
ENSG00000148606POLR3A10090.360ENSAPEG00000001966-10090.360Amphiprion_percula
ENSG00000148606POLR3A7179.130ENSAPEG00000004479-9477.778Amphiprion_percula
ENSG00000148606POLR3A9492.157ENSAPEG00000004262-9884.211Amphiprion_percula
ENSG00000148606POLR3A7180.000ENSAPEG00000019224-9478.632Amphiprion_percula
ENSG00000148606POLR3A6290.099ENSAPEG00000024794-7691.919Amphiprion_percula
ENSG00000148606POLR3A10090.504ENSAPEG00000013351polr3a10090.504Amphiprion_percula
ENSG00000148606POLR3A8080.620ENSAPEG00000020449-9580.620Amphiprion_percula
ENSG00000148606POLR3A7575.806ENSAPEG00000021935-7875.806Amphiprion_percula
ENSG00000148606POLR3A9892.405ENSATEG00000023277polr3a10090.072Anabas_testudineus
ENSG00000148606POLR3A9996.145ENSAPLG00000015878POLR3A9996.145Anas_platyrhynchos
ENSG00000148606POLR3A9594.737ENSACAG00000007985POLR3A9993.736Anolis_carolinensis
ENSG00000148606POLR3A10098.765ENSANAG00000028922POLR3A9998.765Aotus_nancymaae
ENSG00000148606POLR3A9891.772ENSACLG00000005914polr3a10089.640Astatotilapia_calliptera
ENSG00000148606POLR3A9891.139ENSAMXG00000018852polr3a10087.482Astyanax_mexicanus
ENSG00000148606POLR3A10098.417ENSBTAG00000013259POLR3A10098.417Bos_taurus
ENSG00000148606POLR3A9463.492WBGene00004411rpc-19956.868Caenorhabditis_elegans
ENSG00000148606POLR3A10099.712ENSCJAG00000001015POLR3A10099.712Callithrix_jacchus
ENSG00000148606POLR3A10098.849ENSCAFG00000015546POLR3A10098.849Canis_familiaris
ENSG00000148606POLR3A10098.849ENSCAFG00020014711POLR3A10098.849Canis_lupus_dingo
ENSG00000148606POLR3A10098.129ENSCHIG00000000352POLR3A10098.129Capra_hircus
ENSG00000148606POLR3A10098.921ENSTSYG00000006671POLR3A10098.921Carlito_syrichta
ENSG00000148606POLR3A9997.455ENSCAPG00000016031POLR3A10097.455Cavia_aperea
ENSG00000148606POLR3A10097.338ENSCPOG00000022387POLR3A10097.338Cavia_porcellus
ENSG00000148606POLR3A10099.383ENSCCAG00000032995POLR3A9999.383Cebus_capucinus
ENSG00000148606POLR3A10099.784ENSCATG00000035842POLR3A10099.784Cercocebus_atys
ENSG00000148606POLR3A10097.266ENSCLAG00000009629POLR3A10097.266Chinchilla_lanigera
ENSG00000148606POLR3A10099.928ENSCSAG00000009292POLR3A10099.928Chlorocebus_sabaeus
ENSG00000148606POLR3A8583.277ENSCHOG00000008368POLR3A10083.277Choloepus_hoffmanni
ENSG00000148606POLR3A9896.835ENSCPBG00000002079POLR3A9995.464Chrysemys_picta_bellii
ENSG00000148606POLR3A9676.433ENSCSAVG00000009925-9969.524Ciona_savignyi
ENSG00000148606POLR3A10098.765ENSCANG00000041071POLR3A10099.505Colobus_angolensis_palliatus
ENSG00000148606POLR3A9597.895ENSCGRG00001015599-9298.718Cricetulus_griseus_chok1gshd
ENSG00000148606POLR3A10078.182ENSCGRG00001005169-10078.182Cricetulus_griseus_chok1gshd
ENSG00000148606POLR3A9597.895ENSCGRG00000001019Polr3a10097.654Cricetulus_griseus_crigri
ENSG00000148606POLR3A9893.038ENSCSEG00000016653polr3a10089.928Cynoglossus_semilaevis
ENSG00000148606POLR3A9892.405ENSCVAG00000023049polr3a10089.568Cyprinodon_variegatus
ENSG00000148606POLR3A9990.274ENSDARG00000102569polr3a9990.274Danio_rerio
ENSG00000148606POLR3A10098.129ENSDNOG00000010194POLR3A10098.129Dasypus_novemcinctus
ENSG00000148606POLR3A10098.777ENSDORG00000000184Polr3a10098.777Dipodomys_ordii
ENSG00000148606POLR3A9567.368FBgn0030687CG172099957.308Drosophila_melanogaster
ENSG00000148606POLR3A9898.734ENSETEG00000007477POLR3A8998.785Echinops_telfairi
ENSG00000148606POLR3A9570.455ENSEBUG00000013761polr3a9876.347Eptatretus_burgeri
ENSG00000148606POLR3A10099.137ENSEASG00005023053POLR3A10099.137Equus_asinus_asinus
ENSG00000148606POLR3A98100.000ENSECAG00000019416POLR3A10099.065Equus_caballus
ENSG00000148606POLR3A9694.109ENSEEUG00000001774POLR3A10094.109Erinaceus_europaeus
ENSG00000148606POLR3A9891.139ENSELUG00000014016polr3a10088.155Esox_lucius
ENSG00000148606POLR3A10099.137ENSFCAG00000000843POLR3A10099.137Felis_catus
ENSG00000148606POLR3A10095.902ENSFALG00000006913POLR3A10095.902Ficedula_albicollis
ENSG00000148606POLR3A10097.626ENSFDAG00000007813POLR3A10097.626Fukomys_damarensis
ENSG00000148606POLR3A9891.772ENSFHEG00000011922polr3a9990.000Fundulus_heteroclitus
ENSG00000148606POLR3A9893.038ENSGMOG00000000291polr3a9985.067Gadus_morhua
ENSG00000148606POLR3A10096.259ENSGALG00000004947POLR3A10096.259Gallus_gallus
ENSG00000148606POLR3A9892.405ENSGAFG00000005112polr3a10089.856Gambusia_affinis
ENSG00000148606POLR3A9891.772ENSGACG00000002304polr3a10089.496Gasterosteus_aculeatus
ENSG00000148606POLR3A9896.835ENSGAGG00000010386POLR3A9895.458Gopherus_agassizii
ENSG00000148606POLR3A100100.000ENSGGOG00000027729POLR3A100100.000Gorilla_gorilla
ENSG00000148606POLR3A9891.772ENSHBUG00000018098polr3a10089.640Haplochromis_burtoni
ENSG00000148606POLR3A10097.626ENSHGLG00000017899POLR3A10097.626Heterocephalus_glaber_female
ENSG00000148606POLR3A10097.626ENSHGLG00100008483POLR3A10097.626Heterocephalus_glaber_male
ENSG00000148606POLR3A9891.139ENSHCOG00000001075polr3a10088.993Hippocampus_comes
ENSG00000148606POLR3A9586.772ENSIPUG00000001706polr3a9686.950Ictalurus_punctatus
ENSG00000148606POLR3A9891.772ENSIPUG00000001736-9992.405Ictalurus_punctatus
ENSG00000148606POLR3A10098.921ENSSTOG00000012983POLR3A10098.921Ictidomys_tridecemlineatus
ENSG00000148606POLR3A9898.101ENSJJAG00000006291-9198.734Jaculus_jaculus
ENSG00000148606POLR3A9565.789ENSJJAG00000016217-9887.736Jaculus_jaculus
ENSG00000148606POLR3A9892.405ENSKMAG00000015290polr3a10089.784Kryptolebias_marmoratus
ENSG00000148606POLR3A9893.038ENSLBEG00000017214polr3a9989.057Labrus_bergylta
ENSG00000148606POLR3A9894.304ENSLACG00000018557POLR3A9989.814Latimeria_chalumnae
ENSG00000148606POLR3A9894.937ENSLOCG00000004942polr3a10092.032Lepisosteus_oculatus
ENSG00000148606POLR3A10097.484ENSLAFG00000016719POLR3A10097.484Loxodonta_africana
ENSG00000148606POLR3A10099.856ENSMFAG00000032218POLR3A10099.856Macaca_fascicularis
ENSG00000148606POLR3A10099.856ENSMMUG00000005514POLR3A10099.856Macaca_mulatta
ENSG00000148606POLR3A9797.938ENSMNEG00000035163POLR3A9999.733Macaca_nemestrina
ENSG00000148606POLR3A10099.383ENSMLEG00000030014POLR3A9999.383Mandrillus_leucophaeus
ENSG00000148606POLR3A9892.405ENSMAMG00000017497polr3a10090.000Mastacembelus_armatus
ENSG00000148606POLR3A9891.772ENSMZEG00005000576polr3a10089.640Maylandia_zebra
ENSG00000148606POLR3A8197.516ENSMGAG00000016849-9996.250Meleagris_gallopavo
ENSG00000148606POLR3A9896.835ENSMGAG00000005713-10078.214Meleagris_gallopavo
ENSG00000148606POLR3A9898.734ENSMAUG00000016247Polr3a10096.043Mesocricetus_auratus
ENSG00000148606POLR3A10099.424ENSMICG00000005937POLR3A10099.479Microcebus_murinus
ENSG00000148606POLR3A10097.914ENSMOCG00000012185Polr3a10097.914Microtus_ochrogaster
ENSG00000148606POLR3A10089.281ENSMMOG00000013822polr3a10089.281Mola_mola
ENSG00000148606POLR3A10097.266ENSMODG00000001036POLR3A10097.266Monodelphis_domestica
ENSG00000148606POLR3A9893.038ENSMALG00000001249polr3a10089.424Monopterus_albus
ENSG00000148606POLR3A10098.129MGP_CAROLIEiJ_G0019016Polr3a10098.129Mus_caroli
ENSG00000148606POLR3A10097.986ENSMUSG00000025280Polr3a10097.986Mus_musculus
ENSG00000148606POLR3A10098.129MGP_PahariEiJ_G0030029Polr3a10098.129Mus_pahari
ENSG00000148606POLR3A9898.734MGP_SPRETEiJ_G0019894Polr3a9799.010Mus_spretus
ENSG00000148606POLR3A10098.146ENSMPUG00000003790POLR3A10098.146Mustela_putorius_furo
ENSG00000148606POLR3A10097.914ENSMLUG00000011522POLR3A10097.914Myotis_lucifugus
ENSG00000148606POLR3A9899.367ENSNGAG00000015863Polr3a10096.619Nannospalax_galili
ENSG00000148606POLR3A9891.772ENSNBRG00000014262polr3a10088.273Neolamprologus_brichardi
ENSG00000148606POLR3A95100.000ENSNLEG00000010501POLR3A9294.805Nomascus_leucogenys
ENSG00000148606POLR3A9894.304ENSMEUG00000012446POLR3A10084.727Notamacropus_eugenii
ENSG00000148606POLR3A9898.101ENSOPRG00000001880-10093.453Ochotona_princeps
ENSG00000148606POLR3A9898.101ENSODEG00000015146POLR3A10095.899Octodon_degus
ENSG00000148606POLR3A10090.000ENSONIG00000016129polr3a10090.000Oreochromis_niloticus
ENSG00000148606POLR3A9898.734ENSOANG00000007013POLR3A10096.932Ornithorhynchus_anatinus
ENSG00000148606POLR3A10098.129ENSOCUG00000012450POLR3A10098.129Oryctolagus_cuniculus
ENSG00000148606POLR3A9893.038ENSORLG00000008958polr3a10089.928Oryzias_latipes
ENSG00000148606POLR3A9893.038ENSORLG00020007525polr3a9890.164Oryzias_latipes_hni
ENSG00000148606POLR3A9893.038ENSORLG00015006633polr3a10089.784Oryzias_latipes_hsok
ENSG00000148606POLR3A9893.038ENSOMEG00000012865polr3a10088.921Oryzias_melastigma
ENSG00000148606POLR3A10098.993ENSOGAG00000010995POLR3A10098.993Otolemur_garnettii
ENSG00000148606POLR3A10098.060ENSOARG00000009656POLR3A10098.060Ovis_aries
ENSG00000148606POLR3A100100.000ENSPPAG00000031986-100100.000Pan_paniscus
ENSG00000148606POLR3A95100.000ENSPPAG00000041726-9998.438Pan_paniscus
ENSG00000148606POLR3A10099.137ENSPPRG00000002128POLR3A10099.137Panthera_pardus
ENSG00000148606POLR3A10099.137ENSPTIG00000020916POLR3A10099.137Panthera_tigris_altaica
ENSG00000148606POLR3A100100.000ENSPTRG00000002664POLR3A100100.000Pan_troglodytes
ENSG00000148606POLR3A10099.784ENSPANG00000022508POLR3A10099.784Papio_anubis
ENSG00000148606POLR3A10091.727ENSPKIG00000008140polr3a10091.727Paramormyrops_kingsleyae
ENSG00000148606POLR3A9896.203ENSPSIG00000002092POLR3A10095.471Pelodiscus_sinensis
ENSG00000148606POLR3A9991.925ENSPMGG00000015856-9991.925Periophthalmus_magnuspinnatus
ENSG00000148606POLR3A7988.608ENSPMGG00000010601polr3a9781.656Periophthalmus_magnuspinnatus
ENSG00000148606POLR3A10098.058ENSPEMG00000006768Polr3a10098.058Peromyscus_maniculatus_bairdii
ENSG00000148606POLR3A10097.554ENSPCIG00000015842POLR3A10097.554Phascolarctos_cinereus
ENSG00000148606POLR3A9587.895ENSPFOG00000021951polr3a10088.994Poecilia_formosa
ENSG00000148606POLR3A9891.772ENSPFOG00000006458polr3a10091.275Poecilia_formosa
ENSG00000148606POLR3A9587.895ENSPFOG00000022090POLR3A9988.994Poecilia_formosa
ENSG00000148606POLR3A9587.895ENSPLAG00000008311-9688.994Poecilia_latipinna
ENSG00000148606POLR3A10090.072ENSPLAG00000000997polr3a10090.072Poecilia_latipinna
ENSG00000148606POLR3A10090.000ENSPMEG00000006821polr3a10090.000Poecilia_mexicana
ENSG00000148606POLR3A9892.405ENSPREG00000002385polr3a10089.856Poecilia_reticulata
ENSG00000148606POLR3A9899.367ENSPPYG00000002305POLR3A9999.691Pongo_abelii
ENSG00000148606POLR3A8486.450ENSPCAG00000005690POLR3A8786.450Procavia_capensis
ENSG00000148606POLR3A10099.137ENSPCOG00000028311POLR3A10099.137Propithecus_coquereli
ENSG00000148606POLR3A10097.914ENSPVAG00000015553POLR3A10097.914Pteropus_vampyrus
ENSG00000148606POLR3A9891.772ENSPNYG00000020987polr3a10089.640Pundamilia_nyererei
ENSG00000148606POLR3A9891.139ENSPNAG00000006629polr3a9986.393Pygocentrus_nattereri
ENSG00000148606POLR3A10097.986ENSRNOG00000010008Polr3a10097.986Rattus_norvegicus
ENSG00000148606POLR3A10099.383ENSRBIG00000034967POLR3A99100.000Rhinopithecus_bieti
ENSG00000148606POLR3A10099.712ENSRROG00000025527POLR3A10099.712Rhinopithecus_roxellana
ENSG00000148606POLR3A9662.821YOR116CRPO319850.943Saccharomyces_cerevisiae
ENSG00000148606POLR3A10099.928ENSSBOG00000022199POLR3A10099.928Saimiri_boliviensis_boliviensis
ENSG00000148606POLR3A10097.410ENSSHAG00000007588POLR3A9497.410Sarcophilus_harrisii
ENSG00000148606POLR3A10091.871ENSSFOG00015014357polr3a10091.871Scleropages_formosus
ENSG00000148606POLR3A9892.405ENSSMAG00000001780polr3a10089.640Scophthalmus_maximus
ENSG00000148606POLR3A9892.405ENSSDUG00000019840polr3a10090.288Seriola_dumerili
ENSG00000148606POLR3A9892.405ENSSLDG00000023908polr3a10090.288Seriola_lalandi_dorsalis
ENSG00000148606POLR3A9598.421ENSSARG00000009916POLR3A8998.433Sorex_araneus
ENSG00000148606POLR3A9896.835ENSSPUG00000013209POLR3A10093.381Sphenodon_punctatus
ENSG00000148606POLR3A9893.038ENSSPAG00000017712polr3a10090.360Stegastes_partitus
ENSG00000148606POLR3A10098.273ENSSSCG00000010327POLR3A10098.273Sus_scrofa
ENSG00000148606POLR3A7093.805ENSTGUG00000013919-10095.405Taeniopygia_guttata
ENSG00000148606POLR3A10095.827ENSTGUG00000006423-10095.827Taeniopygia_guttata
ENSG00000148606POLR3A9892.405ENSTRUG00000013488polr3a10089.353Takifugu_rubripes
ENSG00000148606POLR3A9893.038ENSTNIG00000013151polr3a10089.727Tetraodon_nigroviridis
ENSG00000148606POLR3A9898.734ENSTBEG00000015288POLR3A7597.872Tupaia_belangeri
ENSG00000148606POLR3A9899.367ENSTTRG00000007817POLR3A10098.844Tursiops_truncatus
ENSG00000148606POLR3A9899.367ENSUAMG00000011283POLR3A10096.475Ursus_americanus
ENSG00000148606POLR3A10098.849ENSUMAG00000013913POLR3A10098.849Ursus_maritimus
ENSG00000148606POLR3A9598.947ENSVPAG00000003285POLR3A10090.255Vicugna_pacos
ENSG00000148606POLR3A10098.777ENSVVUG00000025523POLR3A10098.777Vulpes_vulpes
ENSG00000148606POLR3A9593.158ENSXETG00000018101polr3a10092.398Xenopus_tropicalis
ENSG00000148606POLR3A7052.212ENSXETG00000014329-10061.596Xenopus_tropicalis
ENSG00000148606POLR3A9588.421ENSXCOG00000006098polr3a9888.836Xiphophorus_couchianus
ENSG00000148606POLR3A10090.000ENSXMAG00000015213polr3a10090.000Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001056RNA polymerase III activity21873635.IBAFunction
GO:0003677DNA binding-IEAFunction
GO:0003682chromatin binding-IEAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity21873635.IBAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity9331371.NASFunction
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005666RNA polymerase III complex21873635.IBAComponent
GO:0005666RNA polymerase III complex24107381.IDAComponent
GO:0005829cytosol-TASComponent
GO:0006351transcription, DNA-templated9331371.NASProcess
GO:0006383transcription by RNA polymerase III-IEAProcess
GO:0016020membrane19946888.HDAComponent
GO:0032481positive regulation of type I interferon production-TASProcess
GO:0032728positive regulation of interferon-beta production19609254.IMPProcess
GO:0045087innate immune response19609254.IMPProcess
GO:0046872metal ion binding-IEAFunction
GO:0051607defense response to virus-IEAProcess

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