EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000148688 (Gene tree)
Gene ID
10556
Gene Symbol
RPP30
Alias
TSG15
Full Name
ribonuclease P/MRP subunit p30
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
36,843 bases
Position
chr10:90,871,716-90,908,558
Accession
17688
RBP type
canonical RBP
Summary
(Ribonuclease P/MRP Subunit P30) is a Protein Coding gene. Diseases associated with RPP30 include Omenn Syndrome. Among its related pathways are Gene Expression and tRNA processing. Gene Ontology (GO) annotations related to this gene include ribonuclease P activity.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000360768RNase_P_p30PF01876.161.5e-6311
ENSP00000389182RNase_P_p30PF01876.162.7e-6311
ENSP00000277882RNase_P_p30PF01876.161.2e-6011
ENSP00000407972RNase_P_p30PF01876.169.6e-4511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
25361963The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA.Nucleic Acids Res2014 Dec 1Lai SMdoi: 10.1093/nar/gku994
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000413330RPP30-2031004-ENSP00000389182322 (aa)-P78346
ENST00000479678RPP30-207527--- (aa)--
ENST00000277882RPP30-201767-ENSP00000277882254 (aa)-Q5VU11
ENST00000487998RPP30-2091466--- (aa)--
ENST00000489806RPP30-2101315--- (aa)--
ENST00000371703RPP30-2022589-ENSP00000360768268 (aa)-P78346
ENST00000480406RPP30-208701--- (aa)--
ENST00000466462RPP30-205643--- (aa)--
ENST00000470933RPP30-206624--- (aa)--
ENST00000414836RPP30-204726-ENSP00000407972212 (aa)-Q5VU10
Gene Model
Click here to download ENSG00000148688's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
hsa03013RNA transportKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000148688Blood Glucose5.5420000E-005-
ENSG00000148688Surveys and Questionnaires5E-622566634
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000148688rs45860571090873142TEconomic and political preferences (time)22566634[0.080-0.202] unit increase0.141EFO_0004827
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000148688's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000148688RPP3010054.118ENSAPOG00000023156rpp309851.938Acanthochromis_polyacanthus
ENSG00000148688RPP3010093.657ENSAMEG00000016776RPP3010093.657Ailuropoda_melanoleuca
ENSG00000148688RPP3010052.941ENSACIG00000022810rpp308358.369Amphilophus_citrinellus
ENSG00000148688RPP309956.554ENSAOCG00000016438rpp308956.554Amphiprion_ocellaris
ENSG00000148688RPP309956.554ENSAPEG00000008697rpp308956.554Amphiprion_percula
ENSG00000148688RPP3010053.725ENSATEG00000015263rpp308960.324Anabas_testudineus
ENSG00000148688RPP3010071.622ENSAPLG00000009959RPP3010075.104Anas_platyrhynchos
ENSG00000148688RPP309970.189ENSACAG00000007996RPP309970.189Anolis_carolinensis
ENSG00000148688RPP309985.646ENSANAG00000009439RPP3010079.193Aotus_nancymaae
ENSG00000148688RPP309955.597ENSACLG00000015389-9955.597Astatotilapia_calliptera
ENSG00000148688RPP309957.463ENSAMXG00000040653rpp309857.463Astyanax_mexicanus
ENSG00000148688RPP309993.258ENSBTAG00000002973RPP309993.258Bos_taurus
ENSG00000148688RPP3010096.698ENSCJAG00000011045RPP3010095.896Callithrix_jacchus
ENSG00000148688RPP3010094.030ENSCAFG00000031801RPP3010094.030Canis_familiaris
ENSG00000148688RPP3010094.030ENSCAFG00020000258RPP3010094.030Canis_lupus_dingo
ENSG00000148688RPP309992.891ENSCHIG00000012901RPP309989.139Capra_hircus
ENSG00000148688RPP3010094.403ENSTSYG00000013903RPP3010094.403Carlito_syrichta
ENSG00000148688RPP3010072.170ENSCAPG00000001326RPP3010072.083Cavia_aperea
ENSG00000148688RPP3010092.164ENSCPOG00000033174RPP3010092.164Cavia_porcellus
ENSG00000148688RPP3010097.015ENSCCAG00000029514RPP3010097.015Cebus_capucinus
ENSG00000148688RPP309998.491ENSCATG00000042072RPP309998.491Cercocebus_atys
ENSG00000148688RPP3010093.284ENSCLAG00000008595RPP3010093.284Chinchilla_lanigera
ENSG00000148688RPP309998.876ENSCSAG00000006694RPP309998.876Chlorocebus_sabaeus
ENSG00000148688RPP3010058.203ENSCHOG00000007023-10058.203Choloepus_hoffmanni
ENSG00000148688RPP309976.692ENSCPBG00000026518RPP309976.692Chrysemys_picta_bellii
ENSG00000148688RPP308740.496ENSCING00000019714-8939.669Ciona_intestinalis
ENSG00000148688RPP309638.603ENSCSAVG00000011282-8738.603Ciona_savignyi
ENSG00000148688RPP309998.876ENSCANG00000041084RPP309998.876Colobus_angolensis_palliatus
ENSG00000148688RPP3010084.646ENSCGRG00001017068-9793.103Cricetulus_griseus_chok1gshd
ENSG00000148688RPP3010078.358ENSCGRG00001000834-10078.358Cricetulus_griseus_chok1gshd
ENSG00000148688RPP3010078.731ENSCGRG00000006196-10078.731Cricetulus_griseus_crigri
ENSG00000148688RPP3010092.910ENSCGRG00000002508-10092.910Cricetulus_griseus_crigri
ENSG00000148688RPP309952.381ENSCSEG00000001779rpp309451.986Cynoglossus_semilaevis
ENSG00000148688RPP309958.889ENSCVAG00000003139rpp3010058.456Cyprinodon_variegatus
ENSG00000148688RPP309961.049ENSDARG00000027428rpp309961.049Danio_rerio
ENSG00000148688RPP3010094.030ENSDNOG00000010186RPP309294.030Dasypus_novemcinctus
ENSG00000148688RPP3010092.537ENSDORG00000015333Rpp3010092.537Dipodomys_ordii
ENSG00000148688RPP308732.618FBgn0283652Rpp307832.618Drosophila_melanogaster
ENSG00000148688RPP3010089.179ENSETEG00000018823RPP3010089.179Echinops_telfairi
ENSG00000148688RPP305644.915ENSEBUG00000003989-8339.869Eptatretus_burgeri
ENSG00000148688RPP309993.633ENSEASG00005011050RPP309993.633Equus_asinus_asinus
ENSG00000148688RPP309993.633ENSECAG00000021917RPP309993.633Equus_caballus
ENSG00000148688RPP309969.231ENSEEUG00000009986-9965.900Erinaceus_europaeus
ENSG00000148688RPP309966.543ENSELUG00000003731rpp309566.543Esox_lucius
ENSG00000148688RPP3010093.284ENSFCAG00000029073RPP309393.284Felis_catus
ENSG00000148688RPP309974.906ENSFALG00000007711RPP309975.472Ficedula_albicollis
ENSG00000148688RPP309992.509ENSFDAG00000019241RPP309992.830Fukomys_damarensis
ENSG00000148688RPP3010051.575ENSFHEG00000014739rpp309754.733Fundulus_heteroclitus
ENSG00000148688RPP3010047.893ENSGMOG00000005379rpp3010054.365Gadus_morhua
ENSG00000148688RPP3010073.507ENSGALG00000006486RPP309875.410Gallus_gallus
ENSG00000148688RPP309657.143ENSGAFG00000001445rpp309457.143Gambusia_affinis
ENSG00000148688RPP309955.351ENSGACG00000010285rpp309655.351Gasterosteus_aculeatus
ENSG00000148688RPP309974.812ENSGAGG00000000980RPP306974.812Gopherus_agassizii
ENSG00000148688RPP3010099.254ENSGGOG00000026917RPP3010099.254Gorilla_gorilla
ENSG00000148688RPP309955.970ENSHBUG00000019332rpp309955.970Haplochromis_burtoni
ENSG00000148688RPP3010093.657ENSHGLG00000013072RPP3010093.657Heterocephalus_glaber_female
ENSG00000148688RPP3010093.657ENSHGLG00100017798RPP3010093.657Heterocephalus_glaber_male
ENSG00000148688RPP309950.177ENSHCOG00000004763-9950.177Hippocampus_comes
ENSG00000148688RPP309957.934ENSIPUG00000003863rpp309957.993Ictalurus_punctatus
ENSG00000148688RPP309992.884ENSSTOG00000027002RPP309992.884Ictidomys_tridecemlineatus
ENSG00000148688RPP3010094.403ENSJJAG00000020041Rpp3010094.403Jaculus_jaculus
ENSG00000148688RPP309955.597ENSKMAG00000015355rpp3010055.185Kryptolebias_marmoratus
ENSG00000148688RPP309954.613ENSLBEG00000019989rpp309954.613Labrus_bergylta
ENSG00000148688RPP308462.896ENSLACG00000002534RPP309662.896Latimeria_chalumnae
ENSG00000148688RPP309967.537ENSLOCG00000000031rpp309967.658Lepisosteus_oculatus
ENSG00000148688RPP3010093.657ENSLAFG00000015931RPP3010093.657Loxodonta_africana
ENSG00000148688RPP309998.876ENSMFAG00000031109RPP309998.876Macaca_fascicularis
ENSG00000148688RPP309998.876ENSMMUG00000006628RPP309998.876Macaca_mulatta
ENSG00000148688RPP309998.502ENSMNEG00000033838RPP309998.502Macaca_nemestrina
ENSG00000148688RPP309998.876ENSMLEG00000037578RPP309998.876Mandrillus_leucophaeus
ENSG00000148688RPP309956.827ENSMAMG00000010934rpp3010056.410Mastacembelus_armatus
ENSG00000148688RPP309955.970ENSMZEG00005018508-9955.970Maylandia_zebra
ENSG00000148688RPP3010068.284ENSMGAG00000008452RPP3010068.657Meleagris_gallopavo
ENSG00000148688RPP3010093.657ENSMAUG00000008797Rpp3010093.657Mesocricetus_auratus
ENSG00000148688RPP3010095.149ENSMICG00000012019RPP3010095.149Microcebus_murinus
ENSG00000148688RPP3010091.791ENSMOCG00000016872Rpp3010091.791Microtus_ochrogaster
ENSG00000148688RPP309756.098ENSMMOG00000009266rpp309852.239Mola_mola
ENSG00000148688RPP309971.161ENSMODG00000009342-9971.161Monodelphis_domestica
ENSG00000148688RPP309983.521ENSMODG00000006863-9983.521Monodelphis_domestica
ENSG00000148688RPP309956.827ENSMALG00000011718rpp309956.827Monopterus_albus
ENSG00000148688RPP309990.262MGP_CAROLIEiJ_G0022902Rpp309990.262Mus_caroli
ENSG00000148688RPP3010090.299ENSMUSG00000024800Rpp3010090.299Mus_musculus
ENSG00000148688RPP3010090.299MGP_PahariEiJ_G0014397Rpp3010090.299Mus_pahari
ENSG00000148688RPP3010090.299MGP_SPRETEiJ_G0023821Rpp3010090.299Mus_spretus
ENSG00000148688RPP309993.208ENSMPUG00000017258RPP309393.208Mustela_putorius_furo
ENSG00000148688RPP309995.131ENSMLUG00000017169RPP309995.131Myotis_lucifugus
ENSG00000148688RPP309882.949ENSNGAG00000014392-10075.373Nannospalax_galili
ENSG00000148688RPP3010094.030ENSNGAG00000012018-10094.030Nannospalax_galili
ENSG00000148688RPP3010045.669ENSNBRG00000024170-9151.220Neolamprologus_brichardi
ENSG00000148688RPP3010099.528ENSNLEG00000012383RPP3010099.254Nomascus_leucogenys
ENSG00000148688RPP309973.432ENSMEUG00000015587-10073.432Notamacropus_eugenii
ENSG00000148688RPP305692.958ENSOPRG00000007367-10092.958Ochotona_princeps
ENSG00000148688RPP309892.395ENSODEG00000004530-10092.395Octodon_degus
ENSG00000148688RPP3010069.776ENSODEG00000004560-10069.776Octodon_degus
ENSG00000148688RPP309051.092ENSONIG00000019140rpp3010057.005Oreochromis_niloticus
ENSG00000148688RPP309982.022ENSOANG00000003415RPP309982.022Ornithorhynchus_anatinus
ENSG00000148688RPP3010091.418ENSOCUG00000006896RPP309291.418Oryctolagus_cuniculus
ENSG00000148688RPP3010054.331ENSORLG00000020420rpp309058.015Oryzias_latipes
ENSG00000148688RPP309958.209ENSORLG00020009037-10057.778Oryzias_latipes_hni
ENSG00000148688RPP309958.209ENSORLG00015008300rpp309358.209Oryzias_latipes_hsok
ENSG00000148688RPP308147.573ENSOMEG00000012640-9853.804Oryzias_melastigma
ENSG00000148688RPP3010094.030ENSOGAG00000013963RPP3010094.030Otolemur_garnettii
ENSG00000148688RPP3010088.288ENSOARG00000015789RPP3010083.582Ovis_aries
ENSG00000148688RPP3010099.254ENSPPAG00000043779RPP3010099.254Pan_paniscus
ENSG00000148688RPP3010093.657ENSPPRG00000000115RPP3010093.657Panthera_pardus
ENSG00000148688RPP3010093.657ENSPTIG00000014949RPP3010093.657Panthera_tigris_altaica
ENSG00000148688RPP3010099.379ENSPTRG00000002742RPP3010099.379Pan_troglodytes
ENSG00000148688RPP309998.876ENSPANG00000021710RPP309998.876Papio_anubis
ENSG00000148688RPP306541.566ENSPKIG00000024858rpp307646.528Paramormyrops_kingsleyae
ENSG00000148688RPP309972.321ENSPSIG00000013213RPP309976.763Pelodiscus_sinensis
ENSG00000148688RPP3010040.551ENSPMGG00000014872rpp309344.828Periophthalmus_magnuspinnatus
ENSG00000148688RPP3010075.746ENSPEMG00000001948Rpp3010075.746Peromyscus_maniculatus_bairdii
ENSG00000148688RPP306444.311ENSPMAG00000001855-9944.311Petromyzon_marinus
ENSG00000148688RPP309983.895ENSPCIG00000015730RPP309983.895Phascolarctos_cinereus
ENSG00000148688RPP309956.618ENSPFOG00000000610rpp309956.618Poecilia_formosa
ENSG00000148688RPP309852.610ENSPLAG00000003728rpp308558.468Poecilia_latipinna
ENSG00000148688RPP309955.515ENSPMEG00000015692rpp309955.515Poecilia_mexicana
ENSG00000148688RPP309955.926ENSPREG00000001536rpp309955.926Poecilia_reticulata
ENSG00000148688RPP3010098.881ENSPPYG00000002473RPP3010098.881Pongo_abelii
ENSG00000148688RPP3010062.992ENSPCAG00000016930RPP3010061.189Procavia_capensis
ENSG00000148688RPP3010095.149ENSPCOG00000017865RPP3010095.149Propithecus_coquereli
ENSG00000148688RPP3010091.339ENSPVAG00000010524RPP309585.567Pteropus_vampyrus
ENSG00000148688RPP309453.431ENSPNYG00000016930-8848.249Pundamilia_nyererei
ENSG00000148688RPP309961.194ENSPNAG00000014804rpp309961.194Pygocentrus_nattereri
ENSG00000148688RPP3010090.672ENSRNOG00000018718Rpp3010090.672Rattus_norvegicus
ENSG00000148688RPP309995.094ENSRBIG00000036948RPP309794.649Rhinopithecus_bieti
ENSG00000148688RPP305396.429ENSRROG00000043939-9796.429Rhinopithecus_roxellana
ENSG00000148688RPP309977.612ENSSBOG00000025405RPP3010070.462Saimiri_boliviensis_boliviensis
ENSG00000148688RPP3010082.222ENSSHAG00000007452RPP3010082.222Sarcophilus_harrisii
ENSG00000148688RPP3010064.684ENSSFOG00015012510rpp309964.684Scleropages_formosus
ENSG00000148688RPP309956.808ENSSMAG00000013854rpp309856.296Scophthalmus_maximus
ENSG00000148688RPP309956.884ENSSDUG00000015086rpp309856.884Seriola_dumerili
ENSG00000148688RPP3010052.140ENSSLDG00000021234rpp309454.583Seriola_lalandi_dorsalis
ENSG00000148688RPP3010091.791ENSSARG00000007110RPP3010091.791Sorex_araneus
ENSG00000148688RPP309075.000ENSSPUG00000000595RPP309774.138Sphenodon_punctatus
ENSG00000148688RPP309991.386ENSSSCG00000010460RPP309991.386Sus_scrofa
ENSG00000148688RPP3010072.523ENSTGUG00000008399RPP309675.934Taeniopygia_guttata
ENSG00000148688RPP305341.958ENSTRUG00000020711-5741.958Takifugu_rubripes
ENSG00000148688RPP3010054.745ENSTNIG00000018540rpp309654.745Tetraodon_nigroviridis
ENSG00000148688RPP3010088.739ENSTBEG00000010734RPP3010092.342Tupaia_belangeri
ENSG00000148688RPP309977.880ENSTTRG00000014708RPP308981.933Tursiops_truncatus
ENSG00000148688RPP308183.415ENSUAMG00000001045RPP309093.989Ursus_americanus
ENSG00000148688RPP3010093.657ENSUMAG00000000971RPP3010093.657Ursus_maritimus
ENSG00000148688RPP3010080.315ENSVPAG00000002077RPP3010077.003Vicugna_pacos
ENSG00000148688RPP3010090.868ENSVVUG00000021784RPP3010085.448Vulpes_vulpes
ENSG00000148688RPP309970.776ENSXETG00000021785rpp308972.917Xenopus_tropicalis
ENSG00000148688RPP309557.143ENSXCOG00000017864rpp309454.264Xiphophorus_couchianus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000172ribonuclease MRP complex16723659.IDAComponent
GO:0001682tRNA 5'-leader removal16723659.30454648.IDAProcess
GO:0001682tRNA 5'-leader removal-TASProcess
GO:0003723RNA binding22658674.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0004526ribonuclease P activity21873635.IBAFunction
GO:0004526ribonuclease P activity16723659.30454648.IDAFunction
GO:0005515protein binding25416956.IPIFunction
GO:0005634nucleus9630247.TASComponent
GO:0005654nucleoplasm-TASComponent
GO:0005655nucleolar ribonuclease P complex21873635.IBAComponent
GO:0008033tRNA processing21873635.IBAProcess
GO:0030681multimeric ribonuclease P complex16723659.30454648.IDAComponent
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic-IEAProcess

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