EuRBPDB

Description

Ensembl ID: ENSG00000149929 (Gene tree)
Gene ID: 8479
Gene Symbol: HIRIP3
Alias: N
Full Name: HIRA interacting protein 3
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 4,116 bases
Position: chr16:29,992,321-29,996,436
Accession: 4917
RBP type: non-canonical RBP
Summary: The HIRA protein shares sequence similarity with Hir1p and Hir2p, the two corepressors of histone gene transcription characterized in the yeast, Saccharomyces cerevisiae. The structural features of the HIRA protein suggest that it may function as part of a multiprotein complex. Several cDNAs encoding HIRA-interacting proteins, or HIRIPs, have been identified. In vitro, the protein encoded by this gene binds HIRA, as well as H2B and H3 core histones, indicating that a complex containing HIRA-HIRIP3 could function in some aspects of chromatin and histone metabolism. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.[provided by RefSeq, Aug 2011]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000568880	HIRIP3-207	738	-	-	- (aa)	-	-
ENST00000279392	HIRIP3-201	3388	-	ENSP00000279392	556 (aa)	-	Q9BW71
ENST00000563053	HIRIP3-202	1686	-	-	- (aa)	-	-
ENST00000566471	HIRIP3-206	607	-	-	- (aa)	-	-
ENST00000563680	HIRIP3-203	755	-	-	- (aa)	-	-
ENST00000564026	HIRIP3-204	988	-	ENSP00000456824	175 (aa)	-	Q9BW71
ENST00000565996	HIRIP3-205	582	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	9710638.	IPI	Function
GO:0005634	nucleus	17391060.	IDA	Component
GO:0005730	nucleolus	-	IDA	Component
GO:0006333	chromatin assembly or disassembly	9710638.	TAS	Process