EuRBPDB

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  • Basic Information
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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000162851 (Gene tree)
Gene ID
64216
Gene Symbol
TFB2M
Alias
FLJ23182|FLJ22661|Hkp1
Full Name
transcription factor B2, mitochondrial
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
25,765 bases
Position
chr1:246,540,560-246,566,324
Accession
18559
RBP type
canonical RBP
Summary
(Transcription Factor B2, Mitochondrial) is a Protein Coding gene. Among its related pathways are Mitochondrial Gene Expression and Organelle biogenesis and maintenance. Gene Ontology (GO) annotations related to this gene include rRNA methyltransferase activity. An important paralog of this gene is TFB1M.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000355471RrnaADPF00398.203.1e-1911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
17557812Relative abundance of the human mitochondrial transcription system and distinct roles for h-mtTFB1 and h-mtTFB2 in mitochondrial biogenesis and gene expression.Nucleic Acids Res2007Cotney J-
17337445Human mitochondrial ribosomal protein MRPL12 interacts directly with mitochondrial RNA polymerase to modulate mitochondrial gene expression.J Biol Chem2007 Apr 27Wang Z-
25800739A model for transcription initiation in human mitochondria.Nucleic Acids Res2015 Apr 20Morozov YIdoi: 10.1093/nar/gkv235
30190598Structural basis of mitochondrial transcription.Nat Struct Mol Biol2018 SepHillen HSdoi: 10.1038/s41594-018-0122-9
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000366514TFB2M-2011848XM_011544248ENSP00000355471396 (aa)XP_011542550Q9H5Q4
Gene Model
Click here to download ENSG00000162851's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000162851's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000162851TFB2M8339.394ENSAPOG00000020846tfb2m7239.394Acanthochromis_polyacanthus
ENSG00000162851TFB2M9952.826ENSAMEG00000006593TFB2M9952.736Ailuropoda_melanoleuca
ENSG00000162851TFB2M8440.419ENSACIG00000008758tfb2m7440.419Amphilophus_citrinellus
ENSG00000162851TFB2M7541.472ENSAOCG00000008467tfb2m6541.806Amphiprion_ocellaris
ENSG00000162851TFB2M7541.472ENSAPEG00000004298tfb2m6541.806Amphiprion_percula
ENSG00000162851TFB2M8239.759ENSATEG00000020372tfb2m7139.759Anabas_testudineus
ENSG00000162851TFB2M8444.776ENSACAG00000011940TFB2M9844.776Anolis_carolinensis
ENSG00000162851TFB2M10067.758ENSANAG00000038040TFB2M9967.758Aotus_nancymaae
ENSG00000162851TFB2M8240.491ENSACLG00000009801tfb2m7140.491Astatotilapia_calliptera
ENSG00000162851TFB2M8241.104ENSAMXG00000001243tfb2m8041.104Astyanax_mexicanus
ENSG00000162851TFB2M9953.924ENSBTAG00000000072TFB2M9953.924Bos_taurus
ENSG00000162851TFB2M10067.003ENSCJAG00000016845TFB2M10067.003Callithrix_jacchus
ENSG00000162851TFB2M9952.381ENSCAFG00000032694TFB2M9952.381Canis_familiaris
ENSG00000162851TFB2M9952.381ENSCAFG00020001084TFB2M9952.381Canis_lupus_dingo
ENSG00000162851TFB2M9954.430ENSCHIG00000017458TFB2M9954.430Capra_hircus
ENSG00000162851TFB2M9969.873ENSTSYG00000010006TFB2M9969.873Carlito_syrichta
ENSG00000162851TFB2M9949.010ENSCPOG00000013225-9949.010Cavia_porcellus
ENSG00000162851TFB2M10066.499ENSCCAG00000028811TFB2M9966.499Cebus_capucinus
ENSG00000162851TFB2M9970.886ENSCATG00000043081-9971.646Cercocebus_atys
ENSG00000162851TFB2M9977.215ENSCATG00000041118TFB2M9977.215Cercocebus_atys
ENSG00000162851TFB2M9952.020ENSCLAG00000008614TFB2M9952.020Chinchilla_lanigera
ENSG00000162851TFB2M9985.823ENSCSAG00000009135TFB2M9985.823Chlorocebus_sabaeus
ENSG00000162851TFB2M9955.612ENSCHOG00000001296TFB2M9955.612Choloepus_hoffmanni
ENSG00000162851TFB2M8444.880ENSCPBG00000016975TFB2M8144.880Chrysemys_picta_bellii
ENSG00000162851TFB2M9971.465ENSCANG00000023198-9971.465Colobus_angolensis_palliatus
ENSG00000162851TFB2M9953.418ENSCGRG00001000953Tfb2m9953.418Cricetulus_griseus_chok1gshd
ENSG00000162851TFB2M9953.418ENSCGRG00000013379Tfb2m9953.418Cricetulus_griseus_crigri
ENSG00000162851TFB2M7933.439ENSCSEG00000008303TFB2M6935.197Cynoglossus_semilaevis
ENSG00000162851TFB2M8437.425ENSCVAG00000010328tfb2m7437.425Cyprinodon_variegatus
ENSG00000162851TFB2M8239.939ENSDARG00000074756tfb2m7439.939Danio_rerio
ENSG00000162851TFB2M9960.401ENSDNOG00000035182TFB2M10060.401Dasypus_novemcinctus
ENSG00000162851TFB2M9956.313ENSDORG00000026012Tfb2m9956.313Dipodomys_ordii
ENSG00000162851TFB2M8650.442ENSETEG00000007294-10050.442Echinops_telfairi
ENSG00000162851TFB2M10064.141ENSEASG00005005729TFB2M9964.141Equus_asinus_asinus
ENSG00000162851TFB2M10064.394ENSECAG00000016462TFB2M9964.394Equus_caballus
ENSG00000162851TFB2M8441.317ENSELUG00000002046tfb2m9239.701Esox_lucius
ENSG00000162851TFB2M9757.623ENSFCAG00000021951TFB2M9957.623Felis_catus
ENSG00000162851TFB2M7645.151ENSFALG00000011573TFB2M8945.151Ficedula_albicollis
ENSG00000162851TFB2M9950.886ENSFDAG00000005822TFB2M9950.886Fukomys_damarensis
ENSG00000162851TFB2M8439.118ENSFHEG00000019185tfb2m7439.118Fundulus_heteroclitus
ENSG00000162851TFB2M5833.188ENSGMOG00000013664tfb2m9733.188Gadus_morhua
ENSG00000162851TFB2M8742.693ENSGALG00000010651TFB2M8842.693Gallus_gallus
ENSG00000162851TFB2M8439.412ENSGAFG00000008503tfb2m7439.412Gambusia_affinis
ENSG00000162851TFB2M5838.261ENSGACG00000016236tfb2m9738.261Gasterosteus_aculeatus
ENSG00000162851TFB2M7644.186ENSGAGG00000023556TFB2M7244.186Gopherus_agassizii
ENSG00000162851TFB2M10098.232ENSGGOG00000001095TFB2M10098.232Gorilla_gorilla
ENSG00000162851TFB2M8439.820ENSHBUG00000000565tfb2m7339.820Haplochromis_burtoni
ENSG00000162851TFB2M9950.000ENSHGLG00000015476-9950.000Heterocephalus_glaber_female
ENSG00000162851TFB2M9950.000ENSHGLG00100004104-9950.000Heterocephalus_glaber_male
ENSG00000162851TFB2M8239.091ENSHCOG00000018851tfb2m7039.091Hippocampus_comes
ENSG00000162851TFB2M8244.343ENSIPUG00000015951TFB2M7544.343Ictalurus_punctatus
ENSG00000162851TFB2M9956.345ENSSTOG00000034162TFB2M10056.345Ictidomys_tridecemlineatus
ENSG00000162851TFB2M9958.481ENSJJAG00000019285Tfb2m9958.481Jaculus_jaculus
ENSG00000162851TFB2M8438.922ENSKMAG00000019736tfb2m7438.922Kryptolebias_marmoratus
ENSG00000162851TFB2M8439.157ENSLBEG00000003846tfb2m7239.157Labrus_bergylta
ENSG00000162851TFB2M6141.736ENSLACG00000016461tfb2m9540.828Latimeria_chalumnae
ENSG00000162851TFB2M8444.910ENSLOCG00000016646tfb2m7944.910Lepisosteus_oculatus
ENSG00000162851TFB2M9863.104ENSLAFG00000015061TFB2M9763.104Loxodonta_africana
ENSG00000162851TFB2M9985.316ENSMFAG00000000959TFB2M9985.316Macaca_fascicularis
ENSG00000162851TFB2M9985.316ENSMMUG00000022915TFB2M9985.316Macaca_mulatta
ENSG00000162851TFB2M9971.139ENSMMUG00000041253-9971.899Macaca_mulatta
ENSG00000162851TFB2M9985.316ENSMNEG00000034600TFB2M9985.316Macaca_nemestrina
ENSG00000162851TFB2M9966.582ENSMNEG00000045067-9967.342Macaca_nemestrina
ENSG00000162851TFB2M9985.570ENSMLEG00000031716TFB2M9985.570Mandrillus_leucophaeus
ENSG00000162851TFB2M8439.521ENSMAMG00000020525tfb2m6639.521Mastacembelus_armatus
ENSG00000162851TFB2M8240.491ENSMZEG00005010491tfb2m7140.491Maylandia_zebra
ENSG00000162851TFB2M7344.674ENSMGAG00000011408TFB2M9844.674Meleagris_gallopavo
ENSG00000162851TFB2M9954.523ENSMAUG00000015170Tfb2m9954.523Mesocricetus_auratus
ENSG00000162851TFB2M9968.354ENSMICG00000016790TFB2M9968.354Microcebus_murinus
ENSG00000162851TFB2M9955.919ENSMOCG00000016864Tfb2m9955.919Microtus_ochrogaster
ENSG00000162851TFB2M8439.820ENSMMOG00000001118tfb2m7439.820Mola_mola
ENSG00000162851TFB2M7346.528ENSMODG00000029299-9846.528Monodelphis_domestica
ENSG00000162851TFB2M9139.410ENSMALG00000007148tfb2m8139.410Monopterus_albus
ENSG00000162851TFB2M5845.041ENSMALG00000020355-6345.041Monopterus_albus
ENSG00000162851TFB2M5844.856ENSMALG00000015323-8244.856Monopterus_albus
ENSG00000162851TFB2M9954.337MGP_CAROLIEiJ_G0014966-9854.337Mus_caroli
ENSG00000162851TFB2M9954.337MGP_CAROLIEiJ_G0014967-9854.337Mus_caroli
ENSG00000162851TFB2M9953.061ENSMUSG00000026492Tfb2m9853.061Mus_musculus
ENSG00000162851TFB2M9954.337MGP_PahariEiJ_G0028197-9854.337Mus_pahari
ENSG00000162851TFB2M9953.827MGP_SPRETEiJ_G0015765-9853.827Mus_spretus
ENSG00000162851TFB2M9954.135ENSMPUG00000015810TFB2M9954.135Mustela_putorius_furo
ENSG00000162851TFB2M9952.405ENSMLUG00000003923TFB2M9952.405Myotis_lucifugus
ENSG00000162851TFB2M9958.186ENSNGAG00000018240Tfb2m9958.186Nannospalax_galili
ENSG00000162851TFB2M5938.356ENSNBRG00000003110-6138.356Neolamprologus_brichardi
ENSG00000162851TFB2M6044.813ENSNBRG00000000213tfb2m9744.813Neolamprologus_brichardi
ENSG00000162851TFB2M10093.687ENSNLEG00000004146TFB2M10093.687Nomascus_leucogenys
ENSG00000162851TFB2M9948.500ENSODEG00000013735-9948.500Octodon_degus
ENSG00000162851TFB2M8440.719ENSONIG00000017120tfb2m7340.719Oreochromis_niloticus
ENSG00000162851TFB2M7547.826ENSOANG00000010246-9847.945Ornithorhynchus_anatinus
ENSG00000162851TFB2M9965.063ENSOCUG00000013727-9965.063Oryctolagus_cuniculus
ENSG00000162851TFB2M9963.544ENSOCUG00000022792-9963.544Oryctolagus_cuniculus
ENSG00000162851TFB2M8438.922ENSORLG00000011263tfb2m5938.922Oryzias_latipes
ENSG00000162851TFB2M8438.623ENSORLG00020003041tfb2m7238.623Oryzias_latipes_hni
ENSG00000162851TFB2M8239.385ENSORLG00015001311tfb2m7039.385Oryzias_latipes_hsok
ENSG00000162851TFB2M8239.692ENSOMEG00000010814tfb2m7039.692Oryzias_melastigma
ENSG00000162851TFB2M9965.063ENSOGAG00000007823TFB2M9965.063Otolemur_garnettii
ENSG00000162851TFB2M9953.924ENSOARG00000004242-9953.924Ovis_aries
ENSG00000162851TFB2M7656.173ENSOARG00000020149-9956.173Ovis_aries
ENSG00000162851TFB2M10098.737ENSPPAG00000036577TFB2M10098.737Pan_paniscus
ENSG00000162851TFB2M9757.364ENSPPRG00000007350TFB2M9857.364Panthera_pardus
ENSG00000162851TFB2M9756.555ENSPTIG00000007649TFB2M9856.555Panthera_tigris_altaica
ENSG00000162851TFB2M10098.737ENSPTRG00000002188TFB2M10098.737Pan_troglodytes
ENSG00000162851TFB2M9971.139ENSPANG00000033033-9971.139Papio_anubis
ENSG00000162851TFB2M9384.824ENSPANG00000024989TFB2M8684.824Papio_anubis
ENSG00000162851TFB2M9638.579ENSPKIG00000007071tfb2m8838.579Paramormyrops_kingsleyae
ENSG00000162851TFB2M7147.222ENSPSIG00000005507TFB2M9847.222Pelodiscus_sinensis
ENSG00000162851TFB2M7541.472ENSPMGG00000002042tfb2m6641.472Periophthalmus_magnuspinnatus
ENSG00000162851TFB2M9952.645ENSPEMG00000018713Tfb2m9952.645Peromyscus_maniculatus_bairdii
ENSG00000162851TFB2M8134.154ENSPMAG00000007459tfb2m9634.154Petromyzon_marinus
ENSG00000162851TFB2M9946.482ENSPCIG00000003268-9746.482Phascolarctos_cinereus
ENSG00000162851TFB2M8440.120ENSPFOG00000010834tfb2m8540.120Poecilia_formosa
ENSG00000162851TFB2M8438.323ENSPLAG00000000382tfb2m7338.323Poecilia_latipinna
ENSG00000162851TFB2M8440.120ENSPMEG00000011437tfb2m7440.120Poecilia_mexicana
ENSG00000162851TFB2M8439.820ENSPREG00000010841tfb2m7439.820Poecilia_reticulata
ENSG00000162851TFB2M10094.192ENSPPYG00000000046TFB2M10094.192Pongo_abelii
ENSG00000162851TFB2M8562.130ENSPCAG00000014525TFB2M10062.130Procavia_capensis
ENSG00000162851TFB2M9966.835ENSPCOG00000017595TFB2M9866.835Propithecus_coquereli
ENSG00000162851TFB2M10062.121ENSPVAG00000000353TFB2M9962.121Pteropus_vampyrus
ENSG00000162851TFB2M8439.521ENSPNYG00000017560tfb2m7339.521Pundamilia_nyererei
ENSG00000162851TFB2M8245.706ENSPNAG00000006270tfb2m6245.706Pygocentrus_nattereri
ENSG00000162851TFB2M9854.639ENSRNOG00000002695Tfb2m9754.639Rattus_norvegicus
ENSG00000162851TFB2M9987.342ENSRBIG00000007430TFB2M9987.342Rhinopithecus_bieti
ENSG00000162851TFB2M9969.697ENSRBIG00000032518-9969.697Rhinopithecus_bieti
ENSG00000162851TFB2M9987.089ENSRROG00000011991TFB2M9987.089Rhinopithecus_roxellana
ENSG00000162851TFB2M10064.232ENSSBOG00000033950TFB2M9964.232Saimiri_boliviensis_boliviensis
ENSG00000162851TFB2M9943.325ENSSHAG00000010044-9843.325Sarcophilus_harrisii
ENSG00000162851TFB2M8342.378ENSSFOG00015019107tfb2m7442.378Scleropages_formosus
ENSG00000162851TFB2M8344.207ENSSFOG00015019121tfb2m7344.207Scleropages_formosus
ENSG00000162851TFB2M8440.597ENSSMAG00000005476tfb2m7340.597Scophthalmus_maximus
ENSG00000162851TFB2M8439.759ENSSDUG00000001650tfb2m7439.759Seriola_dumerili
ENSG00000162851TFB2M8440.240ENSSLDG00000024489tfb2m7440.240Seriola_lalandi_dorsalis
ENSG00000162851TFB2M8657.602ENSSARG00000003285TFB2M8657.602Sorex_araneus
ENSG00000162851TFB2M8445.833ENSSPUG00000011591TFB2M8345.833Sphenodon_punctatus
ENSG00000162851TFB2M8339.697ENSSPAG00000010535tfb2m7239.697Stegastes_partitus
ENSG00000162851TFB2M9953.418ENSSSCG00000023775TFB2M10053.529Sus_scrofa
ENSG00000162851TFB2M8143.034ENSTGUG00000008396TFB2M9843.034Taeniopygia_guttata
ENSG00000162851TFB2M8639.474ENSTRUG00000010411tfb2m7539.474Takifugu_rubripes
ENSG00000162851TFB2M8242.025ENSTNIG00000017700tfb2m9942.025Tetraodon_nigroviridis
ENSG00000162851TFB2M9959.241ENSTBEG00000008705TFB2M10059.241Tupaia_belangeri
ENSG00000162851TFB2M9951.646ENSTTRG00000005299TFB2M9951.646Tursiops_truncatus
ENSG00000162851TFB2M6755.472ENSUAMG00000009323-9155.472Ursus_americanus
ENSG00000162851TFB2M9953.133ENSUMAG00000013324TFB2M9953.133Ursus_maritimus
ENSG00000162851TFB2M9958.376ENSVPAG00000009586TFB2M9958.376Vicugna_pacos
ENSG00000162851TFB2M7355.593ENSVVUG00000000650-7854.730Vulpes_vulpes
ENSG00000162851TFB2M8642.899ENSXETG00000033343TFB2M9342.899Xenopus_tropicalis
ENSG00000162851TFB2M8439.222ENSXCOG00000012233tfb2m7539.222Xiphophorus_couchianus
ENSG00000162851TFB2M8439.820ENSXMAG00000017710tfb2m7439.820Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity21873635.IBAFunction
GO:0003712transcription coregulator activity12068295.IDAFunction
GO:0003723RNA binding22681889.HDAFunction
GO:0005739mitochondrion-IDAComponent
GO:0005759mitochondrial matrix21873635.IBAComponent
GO:0005759mitochondrial matrix12068295.IDAComponent
GO:0005759mitochondrial matrix-TASComponent
GO:0006390mitochondrial transcription21873635.IBAProcess
GO:0006390mitochondrial transcription12068295.IDAProcess
GO:0006391transcription initiation from mitochondrial promoter20410300.IDAProcess
GO:0006391transcription initiation from mitochondrial promoter-TASProcess
GO:0007005mitochondrion organization-TASProcess
GO:0031167rRNA methylation21873635.IBAProcess
GO:0042645mitochondrial nucleoid18063578.IDAComponent
GO:0045893positive regulation of transcription, DNA-templated20410300.IDAProcess

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr12465409463'UTRnovel0.39
BLCAchr1246548549Missense_Mutationrs746323608R285H0.31RrnaAD
BLCAchr1246564384Missense_MutationnovelA122T0.89RrnaAD
BLCAchr1246566005Missense_MutationNAS45F0.19
BLCAchr1246541181Silentrs369141918A347A0.33
BRCAchr1246551224Missense_MutationNAV262I0.36RrnaAD
BRCAchr1246557527Missense_MutationnovelG137E0.04RrnaAD
BRCAchr12465409153'UTRnovel0.09
BRCAchr1246566041Missense_MutationnovelR33P0.08
BRCAchr12465409183'UTRnovel0.21
BRCAchr1246565895Missense_MutationNAE82K0.11
BRCAchr12465662275'UTRnovel0.33
CESCchr12465410073'UTRnovel0.1
CESCchr12465409463'UTRnovel0.5
CESCchr1246544619SilentnovelL307L0.38
CESCchr1246541120Missense_Mutationrs778994953Q368E0.07RrnaAD
CESCchr1246551249Missense_MutationnovelI253M0.29RrnaAD
COADchr1246544543Missense_Mutationrs776314909A333T0.12RrnaAD
COADchr1246557386Missense_MutationnovelT184I0.05RrnaAD
COADchr1246556619Missense_MutationNAF220C0.17RrnaAD
COADchr1246548567Missense_Mutationrs373807670P279L0.32RrnaAD
COADchr12465410183'UTRrs7803020340.39
COADchr1246556604Missense_MutationNAV225E0.1RrnaAD
COADchr1246541181Silentrs369141918A347A0.9
COADchr1246556591SilentNAI229I0.34
COADchr1246541193SilentNAT343T0.23
COADchr12465410123'UTRnovel0.46
COADchr1246566069Frame_Shift_DelnovelC24Afs*30.19
COADchr12465661475'UTRnovel0.31
COADchr1246548608Splice_SiteNAX266_splice0.22
GBMchr1246556652Missense_MutationnovelY209F0.09RrnaAD
GBMchr1246544630Missense_Mutationrs780893269R304C0.42RrnaAD
GBMchr1246557403Missense_MutationnovelI178M0.42RrnaAD
GBMchr12465410043'UTRrs3715548420.34
GBMchr1246557504Nonsense_Mutationrs763735264R145*0.41RrnaAD
HNSCchr1246564378Missense_MutationNAE124K0.16RrnaAD
HNSCchr1246541139SilentnovelK361K0.07
HNSCchr1246541142SilentnovelE360E0.09
HNSCchr12465661515'UTRnovel0.21
HNSCchr1246566093Missense_Mutationrs143392079A16S0.52
HNSCchr12465410003'UTRnovel0.29
KIRCchr1246544535SilentNAV335V0.21
LGGchr1246566126Missense_MutationnovelV5L0.43
LIHCchr12465661675'UTRnovel0.23
LUADchr1246566083Missense_MutationnovelG19V0.11
LUADchr1246551275Missense_MutationNAD245H0.09RrnaAD
LUADchr1246541147Missense_MutationnovelD359Y0.28RrnaAD
LUADchr1246551268Missense_MutationNAY247C0.24RrnaAD
LUADchr1246544616SilentnovelF308F0.34
LUADchr1246556635Missense_Mutationrs770593847T215A0.06RrnaAD
LUSCchr1246565910Missense_MutationnovelD77H0.2
LUSCchr1246566093Missense_Mutationrs143392079A16S0.48
LUSCchr1246556629Missense_MutationNAI217V0.14RrnaAD
LUSCchr1246566114Missense_MutationnovelP9S0.33
LUSCchr1246544576Missense_MutationnovelH322Y0.07RrnaAD
LUSCchr1246556685Missense_MutationnovelR198T0.51RrnaAD
LUSCchr1246541186Missense_MutationnovelD346N0.19RrnaAD
LUSCchr1246541147Missense_MutationNAD359N0.35RrnaAD
OVchr1246541165Missense_MutationNAQ353E0.76RrnaAD
OVchr1246541062Missense_MutationNAW387S0.09
OVchr12465409783'UTRnovel0.14
OVchr1246551266Frame_Shift_InsnovelH248Efs*180.04RrnaAD
OVchr1246557429Frame_Shift_DelnovelR170Efs*90.15RrnaAD
OVchr1246544589Nonsense_MutationnovelY317*0.38RrnaAD
OVchr1246566021Missense_MutationnovelN40Y0.11
PAADchr12465410043'UTRrs3715548420.27
PAADchr1246544522Missense_Mutationrs778528523R340C0.14RrnaAD
PAADchr1246541059Missense_MutationnovelL388Q0.11
READchr1246565878SilentNAI87I0.4
READchr1246557411Missense_MutationnovelL176V0.05RrnaAD
SKCMchr1246548597Missense_MutationnovelS269L0.46RrnaAD
SKCMchr1246551287Missense_MutationNAP241S0.34RrnaAD
SKCMchr1246541095Missense_MutationnovelT376S0.21RrnaAD
SKCMchr1246544576Missense_MutationnovelH322Y0.46RrnaAD
STADchr1246544606Missense_MutationNAL312I0.22RrnaAD
STADchr1246566029Missense_MutationNAP37L0.22
STADchr1246565898Missense_MutationNAA81T0.27
STADchr1246544548Missense_Mutationrs770122933R331H0.26RrnaAD
STADchr1246564362Missense_MutationNAF129C0.33RrnaAD
STADchr1246564378Missense_MutationNAE124K0.17RrnaAD
STADchr1246566132Missense_MutationNAI3F0.17
STADchr1246548576Missense_Mutationrs545105645R276Q0.07RrnaAD
UCECchr1246548549Missense_Mutationrs746323608R285H0.17RrnaAD
UCECchr12465408983'UTRnovel0.22
UCECchr12465661655'UTRnovel0.1
UCECchr1246548550Missense_Mutationrs772712500R285C0.42RrnaAD
UCECchr1246565907SilentnovelR78R0.14
UCECchr1246541099Nonsense_MutationnovelE375*0.47RrnaAD
UCECchr12465405973'UTRnovel0.74
UCECchr1246556618Missense_MutationnovelF220L0.38RrnaAD
UCECchr1246557484Missense_MutationnovelF151L0.19RrnaAD
UCECchr1246544581Missense_MutationnovelF320S0.39RrnaAD
UCECchr1246566091Frame_Shift_DelNAL17Wfs*100.42
UCECchr1246544570Silentrs373909454L324L0.49
UCECchr1246544549Missense_Mutationrs200729611R331C0.2RrnaAD
UCECchr1246544621Missense_MutationnovelL307V0.48RrnaAD
UCECchr12465409743'UTRnovel0.24
UCECchr1246541182Missense_Mutationrs754216735A347V0.3RrnaAD
UCECchr12465410043'UTRrs3715548420.17
UCECchr12465407033'UTRnovel0.31
UCECchr1246548566Silentrs146116264P279P0.13
UCECchr1246551212Splice_SitenovelX265_splice0.31
UCECchr1246565842SilentnovelL99L0.33
UCECchr12465409273'UTRnovel0.25
UCECchr1246541117Missense_Mutationrs757317881D369Y0.56RrnaAD
UCECchr1246556657Silentrs373504632L207L0.55
UCECchr12465661565'UTRnovel0.4
UCECchr1246548570Missense_MutationnovelG278V0.09RrnaAD
UCECchr1246565988SilentNAL51L0.34
UCECchr12465410183'UTRrs7803020340.28
UCECchr1246544621Missense_MutationnovelL307V0.38RrnaAD
UCECchr1246557429Nonsense_Mutationrs745408018R170*0.38RrnaAD
UCECchr12465409813'UTRnovel0.13

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
BRCAAMP0.69351.4246e-20
DLBCDEL0.14580.0017831
ESCADEL0.05430.0006282
GBMDEL0.05370.0061479
HNSCDEL0.04790.038263
KIRCDEL0.06820.018371
LGGDEL0.04090.11599
LIHCAMP0.65684.3428e-09
PCPGDEL0.09880.12617
READAMP0.26670.14328
SARCDEL0.26852.6086e-08
SKCMAMP0.50419.5039e-09
STADDEL0.03630.0018105
TGCTDEL0.020.16985
THYMAMP0.1870.24554
UCECAMP0.37852.3921e-06

Survival Analysis
CancerP-value Q-value
KIRC0.012

Kaplan-Meier Survival Analysis

MESO0.041

Kaplan-Meier Survival Analysis

BRCA0.015

Kaplan-Meier Survival Analysis

KIRP0.046

Kaplan-Meier Survival Analysis

READ0.0041

Kaplan-Meier Survival Analysis

KICH0.0079

Kaplan-Meier Survival Analysis

LGG0.00073

Kaplan-Meier Survival Analysis

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


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