EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000164338 (Gene tree)
Gene ID
84135
Gene Symbol
UTP15
Alias
FLJ12787|NET21|FLJ23637
Full Name
UTP15 small subunit processome component
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
17,935 bases
Position
chr5:73,565,443-73,583,377
Accession
25758
RBP type
canonical RBP
Summary
(UTP15 Small Subunit Processome Component) is a Protein Coding gene. Diseases associated with UTP15 include Branchiooculofacial Syndrome. Among its related pathways are rRNA processing in the nucleus and cytosol and Gene Expression. Gene Ontology (GO) annotations related to this gene include snoRNA binding.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000440796UTP15_CPF09384.103.7e-4811
ENSP00000424609UTP15_CPF09384.109e-4811
ENSP00000296792UTP15_CPF09384.109.6e-4811
ENSP00000421669UTP15_CPF09384.101.1e-4711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000512550UTP15-206782--- (aa)--
ENST00000508491UTP15-2021828-ENSP00000424609499 (aa)-Q8TED0
ENST00000508686UTP15-203538-ENSP000004243347 (aa)-A0A1Y8EI88
ENST00000296792UTP15-2013687XM_011543680ENSP00000296792518 (aa)XP_011541982Q8TED0
ENST00000543251UTP15-2084922-ENSP00000440796328 (aa)-Q8TED0
ENST00000510478UTP15-205586--- (aa)--
ENST00000509005UTP15-2042057-ENSP00000421669545 (aa)-H0Y8P4
ENST00000513824UTP15-207577-ENSP0000042490265 (aa)-D6RF65
Gene Model
Click here to download ENSG00000164338's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000164338Cholesterol, HDL4.40768165814731E-517903299
ENSG00000164338Body Height8.4670000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000164338's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000164338UTP155830.000ENSG00000183751TBL37230.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000164338UTP1510069.231ENSAPOG00000005857utp159465.051Acanthochromis_polyacanthus
ENSG00000164338UTP1510096.923ENSAMEG00000011501UTP1510095.761Ailuropoda_melanoleuca
ENSG00000164338UTP1510070.769ENSACIG00000018915utp159567.465Amphilophus_citrinellus
ENSG00000164338UTP1510069.231ENSAOCG00000023576utp159465.859Amphiprion_ocellaris
ENSG00000164338UTP1510069.231ENSAPEG00000016524utp159465.657Amphiprion_percula
ENSG00000164338UTP1510070.769ENSATEG00000021278utp159866.151Anabas_testudineus
ENSG00000164338UTP159866.562ENSAPLG00000008503UTP159870.625Anas_platyrhynchos
ENSG00000164338UTP1510076.923ENSACAG00000009351UTP159971.513Anolis_carolinensis
ENSG00000164338UTP15100100.000ENSANAG00000033884UTP1510098.649Aotus_nancymaae
ENSG00000164338UTP1510072.308ENSACLG00000010164utp158866.068Astatotilapia_calliptera
ENSG00000164338UTP1510067.692ENSAMXG00000034085utp159758.052Astyanax_mexicanus
ENSG00000164338UTP1510096.923ENSBTAG00000006843UTP1510095.376Bos_taurus
ENSG00000164338UTP159530.116WBGene00021276Y23H5B.59130.116Caenorhabditis_elegans
ENSG00000164338UTP15100100.000ENSCJAG00000016617UTP1510098.649Callithrix_jacchus
ENSG00000164338UTP1510095.385ENSCAFG00000008250UTP159991.634Canis_familiaris
ENSG00000164338UTP1510095.385ENSCAFG00020017037UTP159994.942Canis_lupus_dingo
ENSG00000164338UTP1510096.923ENSCHIG00000016936UTP1510094.798Capra_hircus
ENSG00000164338UTP1510096.923ENSTSYG00000008265UTP1510096.525Carlito_syrichta
ENSG00000164338UTP1510096.923ENSCAPG00000000279UTP1510074.904Cavia_aperea
ENSG00000164338UTP1510096.923ENSCPOG00000006669UTP1510094.788Cavia_porcellus
ENSG00000164338UTP1510097.876ENSCCAG00000033397UTP1510097.876Cebus_capucinus
ENSG00000164338UTP15100100.000ENSCATG00000008006UTP1510099.035Cercocebus_atys
ENSG00000164338UTP1510096.923ENSCLAG00000016531UTP1510093.822Chinchilla_lanigera
ENSG00000164338UTP15100100.000ENSCSAG00000015499UTP1510099.421Chlorocebus_sabaeus
ENSG00000164338UTP158394.444ENSCHOG00000013907UTP157493.407Choloepus_hoffmanni
ENSG00000164338UTP1510083.077ENSCPBG00000000540UTP159874.853Chrysemys_picta_bellii
ENSG00000164338UTP159545.657ENSCING00000005314-9945.657Ciona_intestinalis
ENSG00000164338UTP15100100.000ENSCANG00000034698UTP1510099.228Colobus_angolensis_palliatus
ENSG00000164338UTP1510098.462ENSCGRG00001013836Utp159791.992Cricetulus_griseus_chok1gshd
ENSG00000164338UTP1510098.462ENSCGRG00000002234Utp159791.992Cricetulus_griseus_crigri
ENSG00000164338UTP1510070.769ENSCSEG00000019924utp159466.263Cynoglossus_semilaevis
ENSG00000164338UTP1510072.308ENSCVAG00000019484utp159964.683Cyprinodon_variegatus
ENSG00000164338UTP1510072.308ENSDARG00000002720utp159758.929Danio_rerio
ENSG00000164338UTP1510098.462ENSDNOG00000043156UTP1510093.436Dasypus_novemcinctus
ENSG00000164338UTP1510096.923ENSDORG00000004399Utp1510091.506Dipodomys_ordii
ENSG00000164338UTP159139.248FBgn0023527CG30719039.248Drosophila_melanogaster
ENSG00000164338UTP1510095.385ENSETEG00000013977UTP1510082.625Echinops_telfairi
ENSG00000164338UTP159445.253ENSEBUG00000001632utp158546.997Eptatretus_burgeri
ENSG00000164338UTP1510098.462ENSEASG00005018111UTP1510094.981Equus_asinus_asinus
ENSG00000164338UTP1510098.462ENSECAG00000019428UTP1510094.981Equus_caballus
ENSG00000164338UTP159481.443ENSEEUG00000010048UTP1510081.443Erinaceus_europaeus
ENSG00000164338UTP1510070.769ENSELUG00000004259utp159566.068Esox_lucius
ENSG00000164338UTP15100100.000ENSFCAG00000026085UTP1510095.174Felis_catus
ENSG00000164338UTP1510078.462ENSFALG00000010206UTP159067.969Ficedula_albicollis
ENSG00000164338UTP1510098.462ENSFDAG00000006305UTP159993.774Fukomys_damarensis
ENSG00000164338UTP1510072.308ENSFHEG00000006935utp159565.868Fundulus_heteroclitus
ENSG00000164338UTP1510070.769ENSGMOG00000007251utp159862.749Gadus_morhua
ENSG00000164338UTP1510080.000ENSGALG00000013510UTP159870.588Gallus_gallus
ENSG00000164338UTP1510070.769ENSGAFG00000017377utp159565.868Gambusia_affinis
ENSG00000164338UTP1510070.769ENSGACG00000004300utp159561.630Gasterosteus_aculeatus
ENSG00000164338UTP1510081.538ENSGAGG00000006599UTP159974.664Gopherus_agassizii
ENSG00000164338UTP15100100.000ENSGGOG00000003301UTP1510099.807Gorilla_gorilla
ENSG00000164338UTP1510072.308ENSHBUG00000000370utp159566.068Haplochromis_burtoni
ENSG00000164338UTP1510098.462ENSHGLG00000000745UTP159880.695Heterocephalus_glaber_female
ENSG00000164338UTP1510098.462ENSHGLG00100005426UTP1510093.629Heterocephalus_glaber_male
ENSG00000164338UTP1510066.154ENSHCOG00000006823utp159864.023Hippocampus_comes
ENSG00000164338UTP1510067.692ENSIPUG00000004917utp159757.654Ictalurus_punctatus
ENSG00000164338UTP1510096.923ENSSTOG00000027733UTP159894.951Ictidomys_tridecemlineatus
ENSG00000164338UTP1510078.462ENSJJAG00000000395-10075.290Jaculus_jaculus
ENSG00000164338UTP1510095.385ENSJJAG00000013122-10076.062Jaculus_jaculus
ENSG00000164338UTP1510073.846ENSKMAG00000004713utp159565.070Kryptolebias_marmoratus
ENSG00000164338UTP1510069.231ENSLBEG00000024186utp159567.265Labrus_bergylta
ENSG00000164338UTP1510083.077ENSLACG00000003219UTP159873.735Latimeria_chalumnae
ENSG00000164338UTP1510076.923ENSLOCG00000011049utp159971.230Lepisosteus_oculatus
ENSG00000164338UTP1510096.923ENSLAFG00000002596UTP159792.593Loxodonta_africana
ENSG00000164338UTP15100100.000ENSMFAG00000031908UTP1510099.421Macaca_fascicularis
ENSG00000164338UTP15100100.000ENSMMUG00000023514UTP1510099.421Macaca_mulatta
ENSG00000164338UTP15100100.000ENSMNEG00000032169UTP1510099.228Macaca_nemestrina
ENSG00000164338UTP15100100.000ENSMLEG00000038816UTP1510099.035Mandrillus_leucophaeus
ENSG00000164338UTP1510069.231ENSMAMG00000013321utp159567.465Mastacembelus_armatus
ENSG00000164338UTP1510072.308ENSMZEG00005010536utp159566.068Maylandia_zebra
ENSG00000164338UTP159866.978ENSMGAG00000001937UTP159866.410Meleagris_gallopavo
ENSG00000164338UTP1510096.923ENSMAUG00000018838Utp159791.797Mesocricetus_auratus
ENSG00000164338UTP1510098.462ENSMICG00000011813-10095.174Microcebus_murinus
ENSG00000164338UTP1510077.744ENSMICG00000037267-9978.200Microcebus_murinus
ENSG00000164338UTP1510093.846ENSMOCG00000000493Utp159890.347Microtus_ochrogaster
ENSG00000164338UTP1510067.692ENSMMOG00000012931utp159667.265Mola_mola
ENSG00000164338UTP159779.180ENSMODG00000001789UTP159580.164Monodelphis_domestica
ENSG00000164338UTP1510070.769ENSMALG00000021353utp159567.864Monopterus_albus
ENSG00000164338UTP1510096.923MGP_CAROLIEiJ_G0018818Utp159790.820Mus_caroli
ENSG00000164338UTP1510096.923ENSMUSG00000041747Utp159790.078Mus_musculus
ENSG00000164338UTP15100100.000MGP_PahariEiJ_G0015893Utp159792.412Mus_pahari
ENSG00000164338UTP1510096.923MGP_SPRETEiJ_G0019700Utp159789.883Mus_spretus
ENSG00000164338UTP1510096.923ENSMPUG00000005850UTP1510095.560Mustela_putorius_furo
ENSG00000164338UTP15100100.000ENSMLUG00000008483UTP1510094.402Myotis_lucifugus
ENSG00000164338UTP1510096.923ENSNGAG00000022574Utp1510092.664Nannospalax_galili
ENSG00000164338UTP1510072.308ENSNBRG00000020654utp159566.866Neolamprologus_brichardi
ENSG00000164338UTP15100100.000ENSNLEG00000004753UTP1510091.892Nomascus_leucogenys
ENSG00000164338UTP1510083.077ENSMEUG00000002833UTP159974.710Notamacropus_eugenii
ENSG00000164338UTP1510093.846ENSOPRG00000012979UTP1510091.313Ochotona_princeps
ENSG00000164338UTP1510095.385ENSODEG00000001962UTP159993.822Octodon_degus
ENSG00000164338UTP1510072.308ENSONIG00000014323utp159566.866Oreochromis_niloticus
ENSG00000164338UTP1510086.154ENSOANG00000008695UTP159873.933Ornithorhynchus_anatinus
ENSG00000164338UTP1510098.462ENSOCUG00000000617UTP1510094.595Oryctolagus_cuniculus
ENSG00000164338UTP1510070.769ENSORLG00000002095utp159963.724Oryzias_latipes
ENSG00000164338UTP1510069.231ENSORLG00020006632utp159963.724Oryzias_latipes_hni
ENSG00000164338UTP1510069.231ENSORLG00015016375utp159963.340Oryzias_latipes_hsok
ENSG00000164338UTP1510072.308ENSOMEG00000016645utp159465.253Oryzias_melastigma
ENSG00000164338UTP1510096.923ENSOGAG00000000388UTP1510095.560Otolemur_garnettii
ENSG00000164338UTP1510096.923ENSOARG00000004869UTP1510095.385Ovis_aries
ENSG00000164338UTP15100100.000ENSPPAG00000031829UTP1510096.525Pan_paniscus
ENSG00000164338UTP15100100.000ENSPPRG00000003745UTP1510095.174Panthera_pardus
ENSG00000164338UTP15100100.000ENSPTIG00000014484UTP1510094.015Panthera_tigris_altaica
ENSG00000164338UTP15100100.000ENSPTRG00000016982UTP1510099.614Pan_troglodytes
ENSG00000164338UTP15100100.000ENSPANG00000009302UTP1510099.035Papio_anubis
ENSG00000164338UTP1510072.308ENSPKIG00000019386utp159866.926Paramormyrops_kingsleyae
ENSG00000164338UTP1510084.615ENSPSIG00000014028UTP159873.922Pelodiscus_sinensis
ENSG00000164338UTP1510063.077ENSPMGG00000013060utp159565.868Periophthalmus_magnuspinnatus
ENSG00000164338UTP1510098.462ENSPEMG00000012771Utp159892.857Peromyscus_maniculatus_bairdii
ENSG00000164338UTP1510053.846ENSPMAG00000001546utp159547.705Petromyzon_marinus
ENSG00000164338UTP1510089.231ENSPCIG00000027448UTP159782.186Phascolarctos_cinereus
ENSG00000164338UTP1510070.769ENSPFOG00000014446utp159464.881Poecilia_formosa
ENSG00000164338UTP1510070.769ENSPLAG00000014623utp159565.469Poecilia_latipinna
ENSG00000164338UTP1510070.769ENSPMEG00000020067utp159465.070Poecilia_mexicana
ENSG00000164338UTP1510070.769ENSPREG00000010394utp159565.070Poecilia_reticulata
ENSG00000164338UTP15100100.000ENSPPYG00000015550UTP1510099.421Pongo_abelii
ENSG00000164338UTP1510096.923ENSPCAG00000012880UTP1510083.591Procavia_capensis
ENSG00000164338UTP1510092.308ENSPVAG00000007162UTP1510085.328Pteropus_vampyrus
ENSG00000164338UTP1510072.308ENSPNYG00000007278utp159566.068Pundamilia_nyererei
ENSG00000164338UTP1510067.692ENSPNAG00000025612utp159758.449Pygocentrus_nattereri
ENSG00000164338UTP1510096.923ENSRNOG00000016591Utp159791.634Rattus_norvegicus
ENSG00000164338UTP1510096.037ENSRBIG00000031078UTP1510096.037Rhinopithecus_bieti
ENSG00000164338UTP15100100.000ENSRROG00000034462UTP1510099.035Rhinopithecus_roxellana
ENSG00000164338UTP1510033.333YMR093W-9931.008Saccharomyces_cerevisiae
ENSG00000164338UTP15100100.000ENSSBOG00000035374UTP1510098.263Saimiri_boliviensis_boliviensis
ENSG00000164338UTP1510086.154ENSSHAG00000013388UTP159781.139Sarcophilus_harrisii
ENSG00000164338UTP1510075.385ENSSFOG00015015712utp159866.990Scleropages_formosus
ENSG00000164338UTP159966.361ENSSMAG00000007133utp159865.957Scophthalmus_maximus
ENSG00000164338UTP1510072.308ENSSDUG00000022792utp159567.864Seriola_dumerili
ENSG00000164338UTP1510072.308ENSSLDG00000003254utp159568.463Seriola_lalandi_dorsalis
ENSG00000164338UTP1510091.463ENSSARG00000011860UTP1510091.343Sorex_araneus
ENSG00000164338UTP159472.746ENSSPUG00000000063UTP159972.746Sphenodon_punctatus
ENSG00000164338UTP1510069.231ENSSPAG00000008124utp159466.263Stegastes_partitus
ENSG00000164338UTP1510098.462ENSSSCG00000014068UTP1510095.560Sus_scrofa
ENSG00000164338UTP1510081.538ENSTGUG00000005903UTP159868.555Taeniopygia_guttata
ENSG00000164338UTP1510069.231ENSTRUG00000020924utp159764.471Takifugu_rubripes
ENSG00000164338UTP1510067.692ENSTNIG00000015387utp159765.269Tetraodon_nigroviridis
ENSG00000164338UTP1510094.817ENSTBEG00000009170UTP1510096.107Tupaia_belangeri
ENSG00000164338UTP1510096.923ENSTTRG00000007294UTP1510095.376Tursiops_truncatus
ENSG00000164338UTP1510096.923ENSUAMG00000019538UTP1510095.946Ursus_americanus
ENSG00000164338UTP1510096.923ENSUMAG00000007568UTP1510096.139Ursus_maritimus
ENSG00000164338UTP1510098.462ENSVPAG00000009611UTP1510094.015Vicugna_pacos
ENSG00000164338UTP1510095.385ENSVVUG00000007505UTP159994.747Vulpes_vulpes
ENSG00000164338UTP1510076.923ENSXETG00000016821utp159868.959Xenopus_tropicalis
ENSG00000164338UTP1510069.231ENSXCOG00000001529utp159565.868Xiphophorus_couchianus
ENSG00000164338UTP1510069.231ENSXMAG00000014206utp159565.669Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001650fibrillar center24219289.IDAComponent
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding22916032.24219289.IPIFunction
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus24219289.IDAComponent
GO:0005737cytoplasm-IDAComponent
GO:0005783endoplasmic reticulum-IDAComponent
GO:0006364rRNA processing-TASProcess
GO:0045943positive regulation of transcription by RNA polymerase I17699751.IMPProcess
GO:2000234positive regulation of rRNA processing17699751.IMPProcess

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us