EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000164828 (Gene tree)
Gene ID
23353
Gene Symbol
SUN1
Alias
KIAA0810|FLJ12407|UNC84A
Full Name
Sad1 and UNC84 domain containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
80,879 bases
Position
chr7:815,557-896,435
Accession
18587
RBP type
canonical RBP
Summary
This gene is a member of the unc-84 homolog family and encodes a nuclear envelope protein with an Unc84 (SUN) domain. The protein is involved in nuclear anchorage and migration. Alternatively spliced transcript variants have been described. [provided by RefSeq, Jan 2019]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000374225MRPPF09387.101.2e-6811
ENSP00000392309MRPPF09387.101.2e-6811
ENSP00000384015MRPPF09387.102.1e-6811
ENSP00000384116MRPPF09387.104.5e-6811
ENSP00000383947MRPPF09387.102.6e-4911
ENSP00000395952MRPPF09387.103.2e-4911
ENSP00000392595MRPPF09387.109.6e-3612
ENSP00000392595MRPPF09387.109.6e-3622
ENSP00000388430MRPPF09387.106.5e-3511
ENSP00000413439MRPPF09387.105.7e-3412
ENSP00000413439MRPPF09387.105.7e-3422
ENSP00000409909MRPPF09387.104.6e-2711
ENSP00000406653MRPPF09387.101.8e-1511
ENSP00000414279MRPPF09387.103.2e-1311
ENSP00000413188MRPPF09387.103.5e-1311
ENSP00000404965MRPPF09387.103.7e-1211
ENSP00000394381MRPPF09387.103.2e-1111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000440380SUN1-216537-ENSP0000039954988 (aa)-C9JR15
ENST00000403868SUN1-204978-ENSP00000383947257 (aa)-O94901
ENST00000413171SUN1-2064488--- (aa)--
ENST00000477950SUN1-230575--- (aa)--
ENST00000475971SUN1-2294038--- (aa)--
ENST00000435699SUN1-214676-ENSP00000388430174 (aa)-C9JK55
ENST00000401592SUN1-2033953-ENSP00000384015785 (aa)-O94901
ENST00000425407SUN1-2103868-ENSP00000392309702 (aa)-O94901
ENST00000424128SUN1-209633-ENSP0000039459788 (aa)-C9JR15
ENST00000421580SUN1-208540-ENSP00000394381113 (aa)-C9JS54
ENST00000405266SUN1-2054062-ENSP00000384116822 (aa)-E9PHI4
ENST00000464442SUN1-225580--- (aa)--
ENST00000457861SUN1-2222975-ENSP00000406444427 (aa)-H7C2K3
ENST00000497943SUN1-2352824--- (aa)--
ENST00000450538SUN1-217570--- (aa)--
ENST00000439679SUN1-215626-ENSP00000413188135 (aa)-C9K051
ENST00000457598SUN1-221563-ENSP00000404965118 (aa)-C9JJU6
ENST00000469755SUN1-227592--- (aa)--
ENST00000480475SUN1-231680--- (aa)--
ENST00000457378SUN1-2201309-ENSP00000395952278 (aa)-O94901
ENST00000467483SUN1-226992--- (aa)--
ENST00000493681SUN1-234526--- (aa)--
ENST00000483996SUN1-232478--- (aa)--
ENST00000340926SUN1-2012128--- (aa)--
ENST00000471349SUN1-228569--- (aa)--
ENST00000429178SUN1-2123701-ENSP00000409909710 (aa)-H0Y742
ENST00000419312SUN1-207473-ENSP00000414279158 (aa)-H7C3X3
ENST00000433212SUN1-2133474-ENSP00000406653634 (aa)-H0Y6N5
ENST00000452783SUN1-2193717-ENSP00000413439682 (aa)-O94901
ENST00000463848SUN1-224659--- (aa)--
ENST00000450881SUN1-218513-ENSP00000392595171 (aa)-H7C019
ENST00000459810SUN1-223569--- (aa)--
ENST00000488628SUN1-233626--- (aa)--
ENST00000427969SUN1-211520--- (aa)--
ENST00000389574SUN1-2023812-ENSP00000374225702 (aa)-O94901
Gene Model
Click here to download ENSG00000164828's gene model file
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000164828rs610085397818869GPerceived unattractiveness to mosquitoes28199695[0.065-0.165] unit decrease0.114865EFO_0008380
ENSG00000164828rs47194607819973TEducational attainment (MTAG)30038396[0.0059-0.0113] unit decrease0.0086EFO_0004784
ENSG00000164828rs117688507836590TAtrial fibrillation29892015[1.03-1.05]1.04EFO_0000275
ENSG00000164828rs47194607819973TEducational attainment (years of education)30038396[0.0059-0.0117] unit decrease0.0088EFO_0004784
ENSG00000164828rs47197307889486?Body mass index30595370EFO_0004340
ENSG00000164828rs109506737835002?Red cell distribution width30595370EFO_0005192
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000164828's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000164828SUN19256.701ENSAPOG00000018289sun19739.088Acanthochromis_polyacanthus
ENSG00000164828SUN19697.500ENSAMEG00000005870SUN19069.481Ailuropoda_melanoleuca
ENSG00000164828SUN17670.149ENSACIG00000023138sun19939.302Amphilophus_citrinellus
ENSG00000164828SUN17670.149ENSAOCG00000017131sun19041.718Amphiprion_ocellaris
ENSG00000164828SUN19936.744ENSAPEG00000012687sun19936.752Amphiprion_percula
ENSG00000164828SUN19558.333ENSATEG00000024379sun19939.777Anabas_testudineus
ENSG00000164828SUN110057.064ENSAPLG00000008834SUN19254.221Anas_platyrhynchos
ENSG00000164828SUN19583.784ENSACAG00000026971-9252.632Anolis_carolinensis
ENSG00000164828SUN110097.826ENSANAG00000021749SUN110089.581Aotus_nancymaae
ENSG00000164828SUN17670.149ENSACLG00000009247-9937.185Astatotilapia_calliptera
ENSG00000164828SUN17670.149ENSACLG00000027807sun19938.345Astatotilapia_calliptera
ENSG00000164828SUN18869.444ENSAMXG00000008936-9941.932Astyanax_mexicanus
ENSG00000164828SUN19697.500ENSBTAG00000046498SUN19072.146Bos_taurus
ENSG00000164828SUN110097.826ENSCJAG00000015835SUN110089.869Callithrix_jacchus
ENSG00000164828SUN19697.500ENSCAFG00000011273SUN110071.758Canis_familiaris
ENSG00000164828SUN19697.500ENSCAFG00020020501SUN110070.898Canis_lupus_dingo
ENSG00000164828SUN19692.500ENSCHIG00000013368SUN19067.873Capra_hircus
ENSG00000164828SUN19692.308ENSTSYG00000001204SUN19479.470Carlito_syrichta
ENSG00000164828SUN110075.000ENSCAPG00000012385SUN19071.364Cavia_aperea
ENSG00000164828SUN19695.000ENSCPOG00000002301SUN19667.596Cavia_porcellus
ENSG00000164828SUN110097.826ENSCCAG00000021107SUN110089.883Cebus_capucinus
ENSG00000164828SUN110096.591ENSCATG00000011433SUN110094.140Cercocebus_atys
ENSG00000164828SUN19390.000ENSCLAG00000013811SUN110063.837Chinchilla_lanigera
ENSG00000164828SUN110097.727ENSCSAG00000017541SUN19095.434Chlorocebus_sabaeus
ENSG00000164828SUN19687.179ENSCHOG00000009029SUN19963.405Choloepus_hoffmanni
ENSG00000164828SUN19675.610ENSCPBG00000020536SUN110060.419Chrysemys_picta_bellii
ENSG00000164828SUN110096.610ENSCANG00000028126SUN110096.026Colobus_angolensis_palliatus
ENSG00000164828SUN19890.476ENSCGRG00001019963Sun110069.000Cricetulus_griseus_chok1gshd
ENSG00000164828SUN19890.476ENSCGRG00000009140Sun110069.000Cricetulus_griseus_crigri
ENSG00000164828SUN19153.763ENSCSEG00000014129sun19242.202Cynoglossus_semilaevis
ENSG00000164828SUN17568.182ENSCVAG00000018654-7449.495Cyprinodon_variegatus
ENSG00000164828SUN18872.581ENSDARG00000055350sun19943.472Danio_rerio
ENSG00000164828SUN19684.615ENSDNOG00000004960SUN19070.712Dasypus_novemcinctus
ENSG00000164828SUN19787.805ENSDORG00000002734Sun110069.863Dipodomys_ordii
ENSG00000164828SUN19682.500ENSETEG00000004796-8066.426Echinops_telfairi
ENSG00000164828SUN19695.000ENSEASG00005020392SUN110066.512Equus_asinus_asinus
ENSG00000164828SUN19695.000ENSECAG00000017201SUN19766.396Equus_caballus
ENSG00000164828SUN19692.308ENSEEUG00000012695SUN19170.667Erinaceus_europaeus
ENSG00000164828SUN19262.857ENSELUG00000005569-9937.714Esox_lucius
ENSG00000164828SUN19364.634ENSELUG00000016540-9638.267Esox_lucius
ENSG00000164828SUN110080.682ENSFCAG00000005256SUN110071.537Felis_catus
ENSG00000164828SUN19761.607ENSFALG00000013951SUN19456.696Ficedula_albicollis
ENSG00000164828SUN19978.161ENSFDAG00000019237SUN19172.273Fukomys_damarensis
ENSG00000164828SUN19257.895ENSFHEG00000013817sun19240.517Fundulus_heteroclitus
ENSG00000164828SUN16793.220ENSGALG00000003781SUN110054.808Gallus_gallus
ENSG00000164828SUN18872.414ENSGAFG00000020306sun19638.726Gambusia_affinis
ENSG00000164828SUN17668.657ENSGACG00000011433sun19141.168Gasterosteus_aculeatus
ENSG00000164828SUN19175.610ENSGAGG00000003718SUN110058.790Gopherus_agassizii
ENSG00000164828SUN1100100.000ENSGGOG00000012630SUN1100100.000Gorilla_gorilla
ENSG00000164828SUN16596.429ENSGGOG00000037071-10096.429Gorilla_gorilla
ENSG00000164828SUN19685.000ENSHGLG00000009193SUN19072.727Heterocephalus_glaber_female
ENSG00000164828SUN19685.000ENSHGLG00100002847SUN19073.182Heterocephalus_glaber_male
ENSG00000164828SUN110079.545ENSSTOG00000003895SUN19173.059Ictidomys_tridecemlineatus
ENSG00000164828SUN19883.721ENSJJAG00000022626Sun19965.245Jaculus_jaculus
ENSG00000164828SUN18769.697ENSKMAG00000018448-9538.824Kryptolebias_marmoratus
ENSG00000164828SUN18859.375ENSLBEG00000005508sun18441.776Labrus_bergylta
ENSG00000164828SUN19674.359ENSLACG00000014915SUN110054.513Latimeria_chalumnae
ENSG00000164828SUN18772.727ENSLOCG00000001625sun19250.644Lepisosteus_oculatus
ENSG00000164828SUN19694.872ENSLAFG00000015996SUN110068.734Loxodonta_africana
ENSG00000164828SUN110097.727ENSMFAG00000003239SUN110095.364Macaca_fascicularis
ENSG00000164828SUN110097.727ENSMMUG00000017056SUN110095.364Macaca_mulatta
ENSG00000164828SUN110096.591ENSMNEG00000038196SUN110094.702Macaca_nemestrina
ENSG00000164828SUN110097.727ENSMLEG00000031714SUN110095.364Mandrillus_leucophaeus
ENSG00000164828SUN19062.025ENSMAMG00000023352sun19739.256Mastacembelus_armatus
ENSG00000164828SUN17670.149ENSMZEG00005004086sun19938.682Maylandia_zebra
ENSG00000164828SUN16793.220ENSMGAG00000002073SUN18956.444Meleagris_gallopavo
ENSG00000164828SUN19890.476ENSMAUG00000016426Sun110067.875Mesocricetus_auratus
ENSG00000164828SUN19694.872ENSMICG00000033436SUN110075.850Microcebus_murinus
ENSG00000164828SUN19890.476ENSMOCG00000008565Sun110068.125Microtus_ochrogaster
ENSG00000164828SUN16873.333ENSMMOG00000013925sun19937.209Mola_mola
ENSG00000164828SUN19296.970ENSMODG00000008621SUN19066.396Monodelphis_domestica
ENSG00000164828SUN19559.524ENSMALG00000018615sun19940.625Monopterus_albus
ENSG00000164828SUN19890.476MGP_CAROLIEiJ_G0027926Sun110071.875Mus_caroli
ENSG00000164828SUN19890.476ENSMUSG00000036817Sun110071.250Mus_musculus
ENSG00000164828SUN19890.476MGP_PahariEiJ_G0024498Sun110070.625Mus_pahari
ENSG00000164828SUN19890.476MGP_SPRETEiJ_G0028930Sun110071.250Mus_spretus
ENSG00000164828SUN19697.500ENSMPUG00000017885SUN18968.669Mustela_putorius_furo
ENSG00000164828SUN19494.118ENSMLUG00000002094SUN19070.320Myotis_lucifugus
ENSG00000164828SUN19694.872ENSNGAG00000012274Sun19968.493Nannospalax_galili
ENSG00000164828SUN19867.606ENSNBRG00000000767sun19954.286Neolamprologus_brichardi
ENSG00000164828SUN110097.727ENSNLEG00000008323SUN110095.601Nomascus_leucogenys
ENSG00000164828SUN110058.161ENSOPRG00000007214-9157.973Ochotona_princeps
ENSG00000164828SUN19687.500ENSODEG00000010273SUN110068.394Octodon_degus
ENSG00000164828SUN18770.149ENSONIG00000017115sun18643.731Oreochromis_niloticus
ENSG00000164828SUN19687.179ENSOANG00000006996-9066.397Ornithorhynchus_anatinus
ENSG00000164828SUN19874.194ENSOCUG00000026255-9167.713Oryctolagus_cuniculus
ENSG00000164828SUN17668.657ENSORLG00000008524-8940.145Oryzias_latipes
ENSG00000164828SUN17668.657ENSORLG00020019407-9937.924Oryzias_latipes_hni
ENSG00000164828SUN17668.657ENSORLG00015008935sun17357.447Oryzias_latipes_hsok
ENSG00000164828SUN17072.581ENSOMEG00000010585-9937.927Oryzias_melastigma
ENSG00000164828SUN19692.500ENSOGAG00000011509SUN19474.886Otolemur_garnettii
ENSG00000164828SUN19692.500ENSOARG00000005987SUN110065.780Ovis_aries
ENSG00000164828SUN110098.308ENSPPAG00000041385SUN110098.240Pan_paniscus
ENSG00000164828SUN110079.545ENSPPRG00000007333SUN110071.665Panthera_pardus
ENSG00000164828SUN110078.409ENSPTIG00000012353SUN110073.510Panthera_tigris_altaica
ENSG00000164828SUN110098.864ENSPTRG00000018833SUN110098.675Pan_troglodytes
ENSG00000164828SUN110098.864ENSPTRG00000047557-10098.346Pan_troglodytes
ENSG00000164828SUN110096.591ENSPANG00000009862SUN110094.702Papio_anubis
ENSG00000164828SUN19839.032ENSPKIG00000003418-8645.093Paramormyrops_kingsleyae
ENSG00000164828SUN18778.788ENSPKIG00000005653-9943.539Paramormyrops_kingsleyae
ENSG00000164828SUN110061.243ENSPSIG00000004554SUN19060.356Pelodiscus_sinensis
ENSG00000164828SUN19890.476ENSPEMG00000023465Sun19468.182Peromyscus_maniculatus_bairdii
ENSG00000164828SUN19692.308ENSPCIG00000013584SUN19957.697Phascolarctos_cinereus
ENSG00000164828SUN18872.414ENSPFOG00000003382sun19141.142Poecilia_formosa
ENSG00000164828SUN18872.414ENSPLAG00000016432sun19538.303Poecilia_latipinna
ENSG00000164828SUN18872.414ENSPMEG00000014593sun19138.065Poecilia_mexicana
ENSG00000164828SUN17067.742ENSPREG00000007121sun19338.723Poecilia_reticulata
ENSG00000164828SUN1100100.000ENSPPYG00000017288-8596.818Pongo_abelii
ENSG00000164828SUN18588.235ENSPCAG00000002003SUN18888.235Procavia_capensis
ENSG00000164828SUN110082.301ENSPCOG00000024118SUN110080.132Propithecus_coquereli
ENSG00000164828SUN19781.176ENSPVAG00000002955SUN110067.153Pteropus_vampyrus
ENSG00000164828SUN17670.149ENSPNYG00000018927sun19938.682Pundamilia_nyererei
ENSG00000164828SUN16678.125ENSPNAG00000015401-8970.270Pygocentrus_nattereri
ENSG00000164828SUN19890.476ENSRNOG00000001299Sun110065.457Rattus_norvegicus
ENSG00000164828SUN110096.591ENSRBIG00000044381SUN110095.364Rhinopithecus_bieti
ENSG00000164828SUN110096.591ENSRROG00000040182SUN110095.364Rhinopithecus_roxellana
ENSG00000164828SUN110093.478ENSSBOG00000004895SUN110090.469Saimiri_boliviensis_boliviensis
ENSG00000164828SUN19296.970ENSSHAG00000012971SUN18962.500Sarcophilus_harrisii
ENSG00000164828SUN18475.000ENSSFOG00015009139-9944.235Scleropages_formosus
ENSG00000164828SUN17670.149ENSSMAG00000015746sun19142.442Scophthalmus_maximus
ENSG00000164828SUN18859.375ENSSDUG00000010161sun19740.773Seriola_dumerili
ENSG00000164828SUN19357.576ENSSLDG00000022393sun19539.039Seriola_lalandi_dorsalis
ENSG00000164828SUN18292.000ENSSARG00000004450-7592.000Sorex_araneus
ENSG00000164828SUN19276.923ENSSPUG00000001497SUN110055.568Sphenodon_punctatus
ENSG00000164828SUN19156.842ENSSPAG00000008966sun18742.006Stegastes_partitus
ENSG00000164828SUN19690.000ENSSSCG00000007544SUN19866.887Sus_scrofa
ENSG00000164828SUN19760.714ENSTGUG00000008468-9051.837Taeniopygia_guttata
ENSG00000164828SUN18772.581ENSTRUG00000015866sun18941.642Takifugu_rubripes
ENSG00000164828SUN18674.138ENSTNIG00000017972sun19942.442Tetraodon_nigroviridis
ENSG00000164828SUN19690.000ENSTBEG00000008267SUN110068.742Tupaia_belangeri
ENSG00000164828SUN19692.500ENSTTRG00000011458SUN110069.804Tursiops_truncatus
ENSG00000164828SUN110080.682ENSUAMG00000012344SUN110069.689Ursus_americanus
ENSG00000164828SUN110080.682ENSUMAG00000005940SUN110069.670Ursus_maritimus
ENSG00000164828SUN19697.500ENSVVUG00000028925SUN110070.778Vulpes_vulpes
ENSG00000164828SUN19567.857ENSXETG00000021642sun19052.232Xenopus_tropicalis
ENSG00000164828SUN18167.742ENSXMAG00000000898sun19240.693Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001503ossification-IEAProcess
GO:0005515protein binding18396275.22632968.IPIFunction
GO:0005521lamin binding-IEAFunction
GO:0005635nuclear envelope21873635.IBAComponent
GO:0005635nuclear envelope19933576.IDAComponent
GO:0005635nuclear envelope21610090.IMPComponent
GO:0005639integral component of nuclear inner membrane-IEAComponent
GO:0005737cytoplasm-IEAComponent
GO:0006998nuclear envelope organization21873635.IBAProcess
GO:0006998nuclear envelope organization16380439.IGIProcess
GO:0007129synapsis-IEAProcess
GO:0007283spermatogenesis-IEAProcess
GO:0009612response to mechanical stimulus-IEAProcess
GO:0021817nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration-IEAProcess
GO:0031965nuclear membrane-IDAComponent
GO:0034993meiotic nuclear membrane microtubule tethering complex18396275.IDAComponent
GO:0043231intracellular membrane-bounded organelle-IDAComponent
GO:0043495protein membrane anchor21873635.IBAFunction
GO:0051642centrosome localization-IEAProcess
GO:0070197meiotic attachment of telomere to nuclear envelope-IEAProcess
GO:0090286cytoskeletal anchoring at nuclear membrane21873635.IBAProcess
GO:0090286cytoskeletal anchoring at nuclear membrane18396275.IDAProcess
GO:0090292nuclear matrix anchoring at nuclear membrane18396275.IDAProcess

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