EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000166133 (Gene tree)
Gene ID: 27079
Gene Symbol: RPUSD2
Alias: C18B11|FLJ31409|PUS9|C15orf19
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 5,651 bases
Position: chr15:40,569,293-40,574,943
Accession: 24180
RBP type: canonical RBP
Summary: (RNA Pseudouridine Synthase Domain Containing 2) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include pseudouridine synthase activity. An important paralog of this gene is RPUSD4.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000453036	PseudoU_synth_2	PF00849.22	9.4e-32	1	1
ENSP00000323288	PseudoU_synth_2	PF00849.22	1.2e-31	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000616318	RPUSD2-203	631	-	ENSP00000480942	172 (aa)	-	A0A087WXE2
ENST00000315616	RPUSD2-201	2358	-	ENSP00000323288	545 (aa)	-	Q8IZ73
ENST00000559271	RPUSD2-202	1558	-	ENSP00000453036	484 (aa)	-	Q8IZ73

Gene Model

Click here to download ENSG00000166133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000166133's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000166133	RPUSD2	80	58.333	ENSAPOG00000000817	rpusd2	90	54.352	Acanthochromis_polyacanthus
ENSG00000166133	RPUSD2	100	84.220	ENSAMEG00000016996	RPUSD2	100	84.220	Ailuropoda_melanoleuca
ENSG00000166133	RPUSD2	80	59.909	ENSACIG00000024029	rpusd2	90	58.991	Amphilophus_citrinellus
ENSG00000166133	RPUSD2	80	58.643	ENSAOCG00000015237	rpusd2	83	57.531	Amphiprion_ocellaris
ENSG00000166133	RPUSD2	80	58.425	ENSAPEG00000021763	rpusd2	83	57.322	Amphiprion_percula
ENSG00000166133	RPUSD2	80	56.263	ENSATEG00000015242	rpusd2	81	55.901	Anabas_testudineus
ENSG00000166133	RPUSD2	78	66.432	ENSAPLG00000004723	RPUSD2	100	66.432	Anas_platyrhynchos
ENSG00000166133	RPUSD2	80	67.195	ENSACAG00000013893	RPUSD2	92	66.816	Anolis_carolinensis
ENSG00000166133	RPUSD2	100	92.294	ENSANAG00000009691	RPUSD2	100	92.294	Aotus_nancymaae
ENSG00000166133	RPUSD2	80	57.609	ENSACLG00000019531	rpusd2	82	56.813	Astatotilapia_calliptera
ENSG00000166133	RPUSD2	80	57.764	ENSAMXG00000013376	rpusd2	84	55.945	Astyanax_mexicanus
ENSG00000166133	RPUSD2	99	79.606	ENSBTAG00000003193	RPUSD2	99	81.488	Bos_taurus
ENSG00000166133	RPUSD2	74	35.162	WBGene00019498	K07E8.7	97	34.663	Caenorhabditis_elegans
ENSG00000166133	RPUSD2	100	91.009	ENSCJAG00000020841	RPUSD2	100	91.009	Callithrix_jacchus
ENSG00000166133	RPUSD2	100	83.333	ENSCAFG00000009165	RPUSD2	100	83.333	Canis_familiaris
ENSG00000166133	RPUSD2	100	83.514	ENSCAFG00020005849	RPUSD2	100	83.514	Canis_lupus_dingo
ENSG00000166133	RPUSD2	99	81.670	ENSCHIG00000006152	RPUSD2	99	81.670	Capra_hircus
ENSG00000166133	RPUSD2	100	85.872	ENSTSYG00000012844	RPUSD2	100	85.872	Carlito_syrichta
ENSG00000166133	RPUSD2	59	90.244	ENSCAPG00000006895	-	100	90.244	Cavia_aperea
ENSG00000166133	RPUSD2	99	82.528	ENSCPOG00000013201	RPUSD2	99	82.528	Cavia_porcellus
ENSG00000166133	RPUSD2	100	91.376	ENSCCAG00000024378	RPUSD2	100	91.376	Cebus_capucinus
ENSG00000166133	RPUSD2	100	94.495	ENSCATG00000043734	RPUSD2	100	94.495	Cercocebus_atys
ENSG00000166133	RPUSD2	100	83.670	ENSCLAG00000011862	RPUSD2	100	83.670	Chinchilla_lanigera
ENSG00000166133	RPUSD2	94	95.108	ENSCSAG00000007538	RPUSD2	100	95.108	Chlorocebus_sabaeus
ENSG00000166133	RPUSD2	71	89.796	ENSCHOG00000004834	RPUSD2	63	89.796	Choloepus_hoffmanni
ENSG00000166133	RPUSD2	87	63.137	ENSCPBG00000013419	RPUSD2	95	63.137	Chrysemys_picta_bellii
ENSG00000166133	RPUSD2	100	94.495	ENSCANG00000003659	RPUSD2	100	94.495	Colobus_angolensis_palliatus
ENSG00000166133	RPUSD2	100	77.818	ENSCGRG00001009839	Rpusd2	97	77.818	Cricetulus_griseus_chok1gshd
ENSG00000166133	RPUSD2	100	77.818	ENSCGRG00000012348	Rpusd2	100	77.818	Cricetulus_griseus_crigri
ENSG00000166133	RPUSD2	85	54.845	ENSCSEG00000001953	rpusd2	84	54.845	Cynoglossus_semilaevis
ENSG00000166133	RPUSD2	80	60.314	ENSCVAG00000010848	rpusd2	86	58.058	Cyprinodon_variegatus
ENSG00000166133	RPUSD2	93	51.875	ENSDARG00000060992	rpusd2	81	58.385	Danio_rerio
ENSG00000166133	RPUSD2	100	81.685	ENSDNOG00000047745	RPUSD2	100	81.685	Dasypus_novemcinctus
ENSG00000166133	RPUSD2	80	88.249	ENSDORG00000009092	Rpusd2	100	88.249	Dipodomys_ordii
ENSG00000166133	RPUSD2	78	49.420	FBgn0032256	RluA-2	78	49.420	Drosophila_melanogaster
ENSG00000166133	RPUSD2	79	47.966	FBgn0051719	RluA-1	63	47.966	Drosophila_melanogaster
ENSG00000166133	RPUSD2	100	77.982	ENSETEG00000008581	RPUSD2	100	77.982	Echinops_telfairi
ENSG00000166133	RPUSD2	77	35.047	ENSEBUG00000012149	rpusd2	97	33.603	Eptatretus_burgeri
ENSG00000166133	RPUSD2	100	84.239	ENSEASG00005016463	RPUSD2	99	84.239	Equus_asinus_asinus
ENSG00000166133	RPUSD2	100	84.601	ENSECAG00000024178	RPUSD2	99	84.601	Equus_caballus
ENSG00000166133	RPUSD2	89	84.228	ENSEEUG00000005132	RPUSD2	99	69.074	Erinaceus_europaeus
ENSG00000166133	RPUSD2	83	58.209	ENSELUG00000016786	rpusd2	84	58.209	Esox_lucius
ENSG00000166133	RPUSD2	100	84.783	ENSFCAG00000040796	RPUSD2	100	84.783	Felis_catus
ENSG00000166133	RPUSD2	79	70.575	ENSFALG00000001122	RPUSD2	96	70.721	Ficedula_albicollis
ENSG00000166133	RPUSD2	94	84.736	ENSFDAG00000003070	RPUSD2	100	84.736	Fukomys_damarensis
ENSG00000166133	RPUSD2	82	57.826	ENSFHEG00000007518	rpusd2	83	57.826	Fundulus_heteroclitus
ENSG00000166133	RPUSD2	80	59.152	ENSGMOG00000011014	rpusd2	99	57.113	Gadus_morhua
ENSG00000166133	RPUSD2	87	65.121	ENSGALG00000041216	RPUSD2	99	65.121	Gallus_gallus
ENSG00000166133	RPUSD2	82	59.251	ENSGAFG00000003390	rpusd2	81	59.251	Gambusia_affinis
ENSG00000166133	RPUSD2	82	56.421	ENSGACG00000008656	rpusd2	91	56.421	Gasterosteus_aculeatus
ENSG00000166133	RPUSD2	91	63.439	ENSGAGG00000013098	RPUSD2	97	63.439	Gopherus_agassizii
ENSG00000166133	RPUSD2	100	97.615	ENSGGOG00000006684	RPUSD2	100	97.615	Gorilla_gorilla
ENSG00000166133	RPUSD2	80	57.391	ENSHBUG00000023777	rpusd2	82	56.604	Haplochromis_burtoni
ENSG00000166133	RPUSD2	100	81.835	ENSHGLG00000012765	RPUSD2	100	81.835	Heterocephalus_glaber_female
ENSG00000166133	RPUSD2	100	81.835	ENSHGLG00100006653	RPUSD2	100	81.835	Heterocephalus_glaber_male
ENSG00000166133	RPUSD2	87	56.795	ENSHCOG00000015587	rpusd2	84	56.795	Hippocampus_comes
ENSG00000166133	RPUSD2	82	60.560	ENSIPUG00000021006	rpusd2	79	60.560	Ictalurus_punctatus
ENSG00000166133	RPUSD2	100	83.183	ENSSTOG00000025619	RPUSD2	100	83.183	Ictidomys_tridecemlineatus
ENSG00000166133	RPUSD2	100	78.716	ENSJJAG00000023160	Rpusd2	100	79.817	Jaculus_jaculus
ENSG00000166133	RPUSD2	80	58.261	ENSKMAG00000006618	rpusd2	88	54.721	Kryptolebias_marmoratus
ENSG00000166133	RPUSD2	80	57.112	ENSLBEG00000021571	rpusd2	81	56.596	Labrus_bergylta
ENSG00000166133	RPUSD2	80	64.629	ENSLACG00000017338	RPUSD2	100	64.629	Latimeria_chalumnae
ENSG00000166133	RPUSD2	80	63.229	ENSLOCG00000014755	rpusd2	92	62.121	Lepisosteus_oculatus
ENSG00000166133	RPUSD2	99	82.682	ENSLAFG00000015588	RPUSD2	99	82.682	Loxodonta_africana
ENSG00000166133	RPUSD2	100	93.945	ENSMFAG00000045062	RPUSD2	100	93.945	Macaca_fascicularis
ENSG00000166133	RPUSD2	100	94.128	ENSMMUG00000001483	RPUSD2	100	94.128	Macaca_mulatta
ENSG00000166133	RPUSD2	98	91.716	ENSMNEG00000041429	RPUSD2	100	84.153	Macaca_nemestrina
ENSG00000166133	RPUSD2	100	81.405	ENSMLEG00000036551	RPUSD2	100	97.085	Mandrillus_leucophaeus
ENSG00000166133	RPUSD2	80	55.439	ENSMAMG00000001077	rpusd2	81	54.509	Mastacembelus_armatus
ENSG00000166133	RPUSD2	80	57.609	ENSMZEG00005006947	rpusd2	91	56.813	Maylandia_zebra
ENSG00000166133	RPUSD2	84	67.686	ENSMGAG00000003058	RPUSD2	100	67.686	Meleagris_gallopavo
ENSG00000166133	RPUSD2	100	80.287	ENSMAUG00000020467	Rpusd2	100	80.287	Mesocricetus_auratus
ENSG00000166133	RPUSD2	99	87.175	ENSMICG00000028637	RPUSD2	99	87.175	Microcebus_murinus
ENSG00000166133	RPUSD2	99	77.899	ENSMOCG00000020061	Rpusd2	99	77.899	Microtus_ochrogaster
ENSG00000166133	RPUSD2	80	58.427	ENSMMOG00000012020	rpusd2	81	57.734	Mola_mola
ENSG00000166133	RPUSD2	87	77.149	ENSMODG00000000300	RPUSD2	100	70.417	Monodelphis_domestica
ENSG00000166133	RPUSD2	80	55.508	ENSMALG00000010024	rpusd2	81	54.713	Monopterus_albus
ENSG00000166133	RPUSD2	100	76.106	MGP_CAROLIEiJ_G0024130	Rpusd2	100	76.106	Mus_caroli
ENSG00000166133	RPUSD2	100	76.523	ENSMUSG00000027324	Rpusd2	100	76.523	Mus_musculus
ENSG00000166133	RPUSD2	100	76.703	MGP_PahariEiJ_G0025573	Rpusd2	100	76.703	Mus_pahari
ENSG00000166133	RPUSD2	100	76.439	MGP_SPRETEiJ_G0025046	Rpusd2	100	76.439	Mus_spretus
ENSG00000166133	RPUSD2	100	83.877	ENSMPUG00000008517	RPUSD2	100	83.877	Mustela_putorius_furo
ENSG00000166133	RPUSD2	94	87.329	ENSMLUG00000007971	RPUSD2	100	87.329	Myotis_lucifugus
ENSG00000166133	RPUSD2	100	77.960	ENSNGAG00000014126	Rpusd2	100	77.960	Nannospalax_galili
ENSG00000166133	RPUSD2	80	59.410	ENSNBRG00000010070	rpusd2	82	58.515	Neolamprologus_brichardi
ENSG00000166133	RPUSD2	100	96.330	ENSNLEG00000035735	RPUSD2	100	96.330	Nomascus_leucogenys
ENSG00000166133	RPUSD2	100	71.062	ENSMEUG00000008500	RPUSD2	100	71.062	Notamacropus_eugenii
ENSG00000166133	RPUSD2	100	77.982	ENSOPRG00000014177	-	100	77.982	Ochotona_princeps
ENSG00000166133	RPUSD2	96	85.277	ENSODEG00000017193	RPUSD2	97	85.277	Octodon_degus
ENSG00000166133	RPUSD2	80	59.633	ENSONIG00000020102	rpusd2	90	58.720	Oreochromis_niloticus
ENSG00000166133	RPUSD2	100	84.037	ENSOCUG00000015745	RPUSD2	97	84.037	Oryctolagus_cuniculus
ENSG00000166133	RPUSD2	87	56.790	ENSORLG00000015516	rpusd2	89	56.790	Oryzias_latipes
ENSG00000166133	RPUSD2	88	56.212	ENSORLG00020010533	rpusd2	89	56.212	Oryzias_latipes_hni
ENSG00000166133	RPUSD2	81	58.681	ENSORLG00015009206	rpusd2	82	58.681	Oryzias_latipes_hsok
ENSG00000166133	RPUSD2	88	54.545	ENSOMEG00000007355	rpusd2	81	55.533	Oryzias_melastigma
ENSG00000166133	RPUSD2	96	85.824	ENSOGAG00000004867	RPUSD2	100	85.824	Otolemur_garnettii
ENSG00000166133	RPUSD2	99	79.890	ENSOARG00000020235	RPUSD2	99	80.036	Ovis_aries
ENSG00000166133	RPUSD2	100	99.083	ENSPPAG00000032874	RPUSD2	100	99.083	Pan_paniscus
ENSG00000166133	RPUSD2	100	85.688	ENSPPRG00000010446	RPUSD2	100	85.688	Panthera_pardus
ENSG00000166133	RPUSD2	100	85.505	ENSPTIG00000013316	RPUSD2	100	85.505	Panthera_tigris_altaica
ENSG00000166133	RPUSD2	100	99.266	ENSPTRG00000006924	RPUSD2	100	99.266	Pan_troglodytes
ENSG00000166133	RPUSD2	100	94.128	ENSPANG00000019339	RPUSD2	100	94.128	Papio_anubis
ENSG00000166133	RPUSD2	76	71.827	ENSPKIG00000023017	rpusd2	64	69.477	Paramormyrops_kingsleyae
ENSG00000166133	RPUSD2	70	65.607	ENSPSIG00000012680	RPUSD2	99	65.607	Pelodiscus_sinensis
ENSG00000166133	RPUSD2	80	59.039	ENSPMGG00000018165	rpusd2	80	58.114	Periophthalmus_magnuspinnatus
ENSG00000166133	RPUSD2	99	79.412	ENSPEMG00000012878	Rpusd2	99	79.412	Peromyscus_maniculatus_bairdii
ENSG00000166133	RPUSD2	100	67.684	ENSPCIG00000023199	RPUSD2	100	67.684	Phascolarctos_cinereus
ENSG00000166133	RPUSD2	85	57.113	ENSPFOG00000006829	rpusd2	86	57.113	Poecilia_formosa
ENSG00000166133	RPUSD2	85	57.113	ENSPLAG00000022914	rpusd2	97	57.113	Poecilia_latipinna
ENSG00000166133	RPUSD2	85	56.904	ENSPMEG00000009835	rpusd2	97	56.904	Poecilia_mexicana
ENSG00000166133	RPUSD2	82	59.251	ENSPREG00000016441	rpusd2	79	59.251	Poecilia_reticulata
ENSG00000166133	RPUSD2	100	96.514	ENSPPYG00000006355	RPUSD2	100	96.514	Pongo_abelii
ENSG00000166133	RPUSD2	100	85.688	ENSPCOG00000028019	RPUSD2	100	85.688	Propithecus_coquereli
ENSG00000166133	RPUSD2	100	84.771	ENSPVAG00000001837	RPUSD2	100	84.771	Pteropus_vampyrus
ENSG00000166133	RPUSD2	80	59.268	ENSPNYG00000021507	rpusd2	89	58.370	Pundamilia_nyererei
ENSG00000166133	RPUSD2	100	75.806	ENSRNOG00000010528	LOC100911166	100	75.806	Rattus_norvegicus
ENSG00000166133	RPUSD2	100	75.806	ENSRNOG00000046797	Rpusd2	100	75.806	Rattus_norvegicus
ENSG00000166133	RPUSD2	100	94.495	ENSRBIG00000030813	RPUSD2	100	94.495	Rhinopithecus_bieti
ENSG00000166133	RPUSD2	100	94.312	ENSRROG00000026664	RPUSD2	100	94.312	Rhinopithecus_roxellana
ENSG00000166133	RPUSD2	50	45.683	YDL036C	-	60	45.683	Saccharomyces_cerevisiae
ENSG00000166133	RPUSD2	100	90.826	ENSSBOG00000035031	RPUSD2	100	90.826	Saimiri_boliviensis_boliviensis
ENSG00000166133	RPUSD2	72	78.098	ENSSHAG00000015108	RPUSD2	91	78.488	Sarcophilus_harrisii
ENSG00000166133	RPUSD2	70	71.037	ENSSFOG00015019057	rpusd2	69	63.462	Scleropages_formosus
ENSG00000166133	RPUSD2	82	56.485	ENSSMAG00000000903	rpusd2	91	56.485	Scophthalmus_maximus
ENSG00000166133	RPUSD2	80	55.975	ENSSDUG00000019139	rpusd2	82	55.263	Seriola_dumerili
ENSG00000166133	RPUSD2	80	56.394	ENSSLDG00000005938	rpusd2	87	52.564	Seriola_lalandi_dorsalis
ENSG00000166133	RPUSD2	89	86.037	ENSSARG00000002792	RPUSD2	89	86.037	Sorex_araneus
ENSG00000166133	RPUSD2	85	61.795	ENSSPUG00000001206	RPUSD2	97	60.161	Sphenodon_punctatus
ENSG00000166133	RPUSD2	80	56.828	ENSSPAG00000003578	rpusd2	82	56.051	Stegastes_partitus
ENSG00000166133	RPUSD2	99	81.835	ENSSSCG00000036700	RPUSD2	99	81.835	Sus_scrofa
ENSG00000166133	RPUSD2	60	83.495	ENSTGUG00000007353	RPUSD2	100	84.729	Taeniopygia_guttata
ENSG00000166133	RPUSD2	80	56.559	ENSTRUG00000025880	rpusd2	90	55.950	Takifugu_rubripes
ENSG00000166133	RPUSD2	80	58.691	ENSTNIG00000017329	rpusd2	91	58.206	Tetraodon_nigroviridis
ENSG00000166133	RPUSD2	91	89.262	ENSTBEG00000007933	RPUSD2	100	75.229	Tupaia_belangeri
ENSG00000166133	RPUSD2	100	85.138	ENSTTRG00000010585	RPUSD2	100	85.138	Tursiops_truncatus
ENSG00000166133	RPUSD2	94	86.693	ENSUAMG00000001470	RPUSD2	100	86.693	Ursus_americanus
ENSG00000166133	RPUSD2	100	84.220	ENSUMAG00000012487	RPUSD2	88	84.220	Ursus_maritimus
ENSG00000166133	RPUSD2	100	84.037	ENSVPAG00000003844	RPUSD2	100	84.037	Vicugna_pacos
ENSG00000166133	RPUSD2	100	83.877	ENSVVUG00000026590	RPUSD2	100	83.877	Vulpes_vulpes
ENSG00000166133	RPUSD2	83	65.161	ENSXETG00000015973	rpusd2	98	65.161	Xenopus_tropicalis
ENSG00000166133	RPUSD2	82	58.590	ENSXMAG00000021821	rpusd2	92	58.590	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000455	enzyme-directed rRNA pseudouridine synthesis	21873635.	IBA	Process
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process
GO:0009982	pseudouridine synthase activity	21873635.	IBA	Function