EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000167257 (Gene tree)
Gene ID: 257160
Gene Symbol: RNF214
Alias: DKFZp547C195
Full Name: ring finger protein 214
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 53,821 bases
Position: chr11:117,232,625-117,286,445
Accession: 25335
RBP type: non-canonical RBP
Summary: (Ring Finger Protein 214) is a Protein Coding gene.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000530849	RNF214-204	2846	-	ENSP00000432903	513 (aa)	-	E9PN76
ENST00000300650	RNF214-201	2755	-	ENSP00000300650	703 (aa)	-	Q8ND24
ENST00000524917	RNF214-202	545	-	-	- (aa)	-	-
ENST00000531452	RNF214-206	2695	-	ENSP00000431643	703 (aa)	-	Q8ND24
ENST00000534709	RNF214-208	978	-	-	- (aa)	-	-
ENST00000531287	RNF214-205	1706	-	ENSP00000435361	548 (aa)	-	Q8ND24
ENST00000534428	RNF214-207	548	-	ENSP00000434186	146 (aa)	-	E9PRE9
ENST00000529869	RNF214-203	1570	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000167257's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000167257	Eosinophils	7.327e-005	-
ENSG00000167257	Cardiovascular Diseases	8E-7	21779381

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000167257	rs7083	11	117285836	T	Blood protein levels	28240269	[0.25-0.42] unit increase	0.332	EFO_0008270
ENSG00000167257	rs183230709	11	117235584	?	Triglyceride levels	29403010	[0.07-0.117] unit increase novel	0.09348012	EFO_0004530
ENSG00000167257	rs1047964	11	117286177	?	Cardiovascular disease risk factors	21779381	[2.53-8.62]	4.67	EFO_0000319

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000167257's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000167257	RNF214	100	97.414	ENSMUSG00000042790	Rnf214	100	97.586	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function