EuRBPDB

Description

RBDs

Literatures

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000167272 (Gene tree)
Gene ID: 51367
Gene Symbol: POP5
Alias: N
Full Name: POP5 homolog, ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 2,689 bases
Position: chr12:120,578,764-120,581,452
Accession: 17689
RBP type: canonical RBP
Summary: (POP5 Homolog, Ribonuclease P/MRP Subunit) is a Protein Coding gene. Among its related pathways are Gene Expression and tRNA processing. Gene Ontology (GO) annotations related to this gene include ribonuclease activity and ribonuclease P activity.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000350098	RNase_P_Rpp14	PF01900.19	1.4e-25	1	1

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
21878546	Interactions of a Pop5/Rpp1 heterodimer with the catalytic domain of RNase MRP.	RNA	2011 Oct	Perederina A	doi: 10.1261/rna.2855511
25361963	The L7Ae protein binds to two kink-turns in the Pyrococcus furiosus RNase P RNA.	Nucleic Acids Res	2014 Dec 1	Lai SM	doi: 10.1093/nar/gku994

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000542568	POP5-207	578	-	-	- (aa)	-	-
ENST00000541834	POP5-206	653	-	-	- (aa)	-	-
ENST00000543355	POP5-209	794	-	-	- (aa)	-	-
ENST00000539716	POP5-205	718	-	-	- (aa)	-	-
ENST00000535245	POP5-204	608	-	-	- (aa)	-	-
ENST00000341039	POP5-201	913	-	ENSP00000341791	113 (aa)	-	Q969H6
ENST00000542776	POP5-208	821	-	-	- (aa)	-	-
ENST00000511394	POP5-203	494	-	-	- (aa)	-	-
ENST00000357500	POP5-202	801	XM_011538441	ENSP00000350098	163 (aa)	XP_011536743	Q969H6

Gene Model

Click here to download ENSG00000167272's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03008	Ribosome biogenesis in eukaryotes	KEGG
hsa03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000167272's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000167272	POP5	91	55.034	ENSAPOG00000023686	POP5	85	55.634	Acanthochromis_polyacanthus
ENSG00000167272	POP5	100	86.628	ENSAMEG00000008503	POP5	87	90.667	Ailuropoda_melanoleuca
ENSG00000167272	POP5	94	53.896	ENSACIG00000018362	pop5	86	58.741	Amphilophus_citrinellus
ENSG00000167272	POP5	92	54.000	ENSAOCG00000001930	pop5	85	54.930	Amphiprion_ocellaris
ENSG00000167272	POP5	92	54.000	ENSAPEG00000006795	pop5	85	54.930	Amphiprion_percula
ENSG00000167272	POP5	94	53.247	ENSATEG00000016792	pop5	85	56.338	Anabas_testudineus
ENSG00000167272	POP5	55	73.034	ENSAPLG00000015761	POP5	82	73.034	Anas_platyrhynchos
ENSG00000167272	POP5	99	58.896	ENSACAG00000003091	POP5	89	62.162	Anolis_carolinensis
ENSG00000167272	POP5	100	98.160	ENSANAG00000023744	POP5	100	98.160	Aotus_nancymaae
ENSG00000167272	POP5	94	55.195	ENSACLG00000021131	-	81	58.088	Astatotilapia_calliptera
ENSG00000167272	POP5	92	52.980	ENSAMXG00000038175	pop5	85	53.691	Astyanax_mexicanus
ENSG00000167272	POP5	100	87.059	ENSBTAG00000005385	POP5	87	93.243	Bos_taurus
ENSG00000167272	POP5	100	98.773	ENSCJAG00000001309	POP5	100	98.773	Callithrix_jacchus
ENSG00000167272	POP5	100	88.824	ENSCAFG00000010389	POP5	87	92.568	Canis_familiaris
ENSG00000167272	POP5	100	88.824	ENSCAFG00020020663	POP5	87	92.568	Canis_lupus_dingo
ENSG00000167272	POP5	100	88.235	ENSCHIG00000016402	POP5	87	94.595	Capra_hircus
ENSG00000167272	POP5	100	90.533	ENSTSYG00000027616	POP5	100	92.308	Carlito_syrichta
ENSG00000167272	POP5	66	87.611	ENSCAPG00000016873	POP5	82	95.699	Cavia_aperea
ENSG00000167272	POP5	100	89.286	ENSCPOG00000012337	POP5	88	94.595	Cavia_porcellus
ENSG00000167272	POP5	100	97.546	ENSCCAG00000023154	POP5	100	97.546	Cebus_capucinus
ENSG00000167272	POP5	100	99.387	ENSCATG00000036825	POP5	100	99.387	Cercocebus_atys
ENSG00000167272	POP5	100	89.941	ENSCLAG00000007808	POP5	88	96.622	Chinchilla_lanigera
ENSG00000167272	POP5	100	99.387	ENSCSAG00000002246	POP5	100	99.387	Chlorocebus_sabaeus
ENSG00000167272	POP5	89	78.621	ENSCHOG00000013969	POP5	87	78.378	Choloepus_hoffmanni
ENSG00000167272	POP5	100	68.675	ENSCPBG00000011331	POP5	88	72.109	Chrysemys_picta_bellii
ENSG00000167272	POP5	100	98.773	ENSCANG00000028001	POP5	100	98.773	Colobus_angolensis_palliatus
ENSG00000167272	POP5	100	86.982	ENSCGRG00001017974	Pop5	88	93.919	Cricetulus_griseus_chok1gshd
ENSG00000167272	POP5	100	86.982	ENSCGRG00000010102	Pop5	88	93.919	Cricetulus_griseus_crigri
ENSG00000167272	POP5	93	54.305	ENSCSEG00000008332	-	88	54.730	Cynoglossus_semilaevis
ENSG00000167272	POP5	84	57.664	ENSCSEG00000011103	pop5	91	58.088	Cynoglossus_semilaevis
ENSG00000167272	POP5	100	36.620	ENSCVAG00000009152	-	83	40.496	Cyprinodon_variegatus
ENSG00000167272	POP5	91	52.980	ENSDARG00000053452	pop5	88	53.333	Danio_rerio
ENSG00000167272	POP5	100	87.647	ENSDNOG00000045952	-	87	95.946	Dasypus_novemcinctus
ENSG00000167272	POP5	100	86.047	ENSDNOG00000012668	-	79	94.000	Dasypus_novemcinctus
ENSG00000167272	POP5	100	91.071	ENSDORG00000029401	Pop5	100	92.262	Dipodomys_ordii
ENSG00000167272	POP5	87	30.986	FBgn0036696	CG14057	95	30.986	Drosophila_melanogaster
ENSG00000167272	POP5	99	83.133	ENSETEG00000009283	POP5	88	89.189	Echinops_telfairi
ENSG00000167272	POP5	90	40.816	ENSEBUG00000016369	pop5	89	41.096	Eptatretus_burgeri
ENSG00000167272	POP5	100	87.059	ENSEASG00005004714	POP5	87	95.270	Equus_asinus_asinus
ENSG00000167272	POP5	100	87.059	ENSECAG00000010012	POP5	87	95.946	Equus_caballus
ENSG00000167272	POP5	98	55.000	ENSELUG00000023394	pop5	91	58.784	Esox_lucius
ENSG00000167272	POP5	100	86.471	ENSFCAG00000042614	POP5	87	93.919	Felis_catus
ENSG00000167272	POP5	94	67.532	ENSFALG00000007537	POP5	85	70.423	Ficedula_albicollis
ENSG00000167272	POP5	99	87.425	ENSFDAG00000009972	POP5	88	95.270	Fukomys_damarensis
ENSG00000167272	POP5	96	52.866	ENSFHEG00000022341	pop5	89	56.081	Fundulus_heteroclitus
ENSG00000167272	POP5	79	58.915	ENSGMOG00000001073	pop5	98	58.915	Gadus_morhua
ENSG00000167272	POP5	91	58.784	ENSGALG00000007124	POP5	50	60.563	Gallus_gallus
ENSG00000167272	POP5	87	60.563	ENSGAFG00000005937	-	85	60.563	Gambusia_affinis
ENSG00000167272	POP5	95	54.839	ENSGACG00000012710	-	90	56.463	Gasterosteus_aculeatus
ENSG00000167272	POP5	100	67.470	ENSGAGG00000016005	POP5	88	70.748	Gopherus_agassizii
ENSG00000167272	POP5	100	100.000	ENSGGOG00000013505	POP5	100	100.000	Gorilla_gorilla
ENSG00000167272	POP5	94	55.195	ENSHBUG00000011718	-	85	56.338	Haplochromis_burtoni
ENSG00000167272	POP5	100	88.690	ENSHGLG00000011786	POP5	88	94.595	Heterocephalus_glaber_female
ENSG00000167272	POP5	100	88.690	ENSHGLG00100014284	POP5	88	94.595	Heterocephalus_glaber_male
ENSG00000167272	POP5	91	51.007	ENSHCOG00000011809	pop5	87	53.521	Hippocampus_comes
ENSG00000167272	POP5	92	50.667	ENSIPUG00000003437	pop5	88	51.351	Ictalurus_punctatus
ENSG00000167272	POP5	100	91.124	ENSSTOG00000012577	POP5	88	95.270	Ictidomys_tridecemlineatus
ENSG00000167272	POP5	100	84.706	ENSJJAG00000001080	Pop5	87	93.919	Jaculus_jaculus
ENSG00000167272	POP5	90	53.061	ENSKMAG00000011158	-	86	53.061	Kryptolebias_marmoratus
ENSG00000167272	POP5	96	51.592	ENSLBEG00000008652	pop5	78	54.225	Labrus_bergylta
ENSG00000167272	POP5	100	60.736	ENSLACG00000018188	POP5	88	64.789	Latimeria_chalumnae
ENSG00000167272	POP5	91	53.691	ENSLOCG00000002924	pop5	88	54.054	Lepisosteus_oculatus
ENSG00000167272	POP5	100	87.719	ENSLAFG00000014545	POP5	88	93.333	Loxodonta_africana
ENSG00000167272	POP5	100	100.000	ENSMFAG00000045933	POP5	100	100.000	Macaca_fascicularis
ENSG00000167272	POP5	100	100.000	ENSMMUG00000040120	POP5	100	100.000	Macaca_mulatta
ENSG00000167272	POP5	100	100.000	ENSMNEG00000041716	POP5	100	100.000	Macaca_nemestrina
ENSG00000167272	POP5	100	99.387	ENSMLEG00000029377	POP5	100	99.387	Mandrillus_leucophaeus
ENSG00000167272	POP5	94	53.247	ENSMAMG00000002108	pop5	85	57.042	Mastacembelus_armatus
ENSG00000167272	POP5	94	55.195	ENSMZEG00005000069	-	85	56.338	Maylandia_zebra
ENSG00000167272	POP5	100	86.982	ENSMAUG00000019670	Pop5	88	92.568	Mesocricetus_auratus
ENSG00000167272	POP5	100	92.353	ENSMICG00000008692	POP5	100	92.353	Microcebus_murinus
ENSG00000167272	POP5	100	78.107	ENSMOCG00000013322	Pop5	88	83.784	Microtus_ochrogaster
ENSG00000167272	POP5	83	56.296	ENSMMOG00000010471	pop5	82	56.296	Mola_mola
ENSG00000167272	POP5	98	77.778	ENSMODG00000003066	POP5	60	81.081	Monodelphis_domestica
ENSG00000167272	POP5	93	53.289	ENSMALG00000017797	-	85	56.338	Monopterus_albus
ENSG00000167272	POP5	100	86.982	MGP_CAROLIEiJ_G0027618	Pop5	88	93.243	Mus_caroli
ENSG00000167272	POP5	100	86.982	ENSMUSG00000060152	Pop5	88	93.243	Mus_musculus
ENSG00000167272	POP5	100	84.615	MGP_PahariEiJ_G0024198	Pop5	88	90.541	Mus_pahari
ENSG00000167272	POP5	100	85.799	MGP_SPRETEiJ_G0028616	Pop5	88	91.892	Mus_spretus
ENSG00000167272	POP5	92	92.000	ENSMPUG00000003221	POP5	88	91.892	Mustela_putorius_furo
ENSG00000167272	POP5	98	88.554	ENSMLUG00000014657	POP5	90	94.000	Myotis_lucifugus
ENSG00000167272	POP5	100	85.294	ENSNGAG00000002594	Pop5	87	94.595	Nannospalax_galili
ENSG00000167272	POP5	69	56.250	ENSNBRG00000001020	-	83	56.250	Neolamprologus_brichardi
ENSG00000167272	POP5	100	98.780	ENSNLEG00000015839	POP5	100	98.780	Nomascus_leucogenys
ENSG00000167272	POP5	100	79.755	ENSMEUG00000015288	POP5	91	81.081	Notamacropus_eugenii
ENSG00000167272	POP5	90	95.890	ENSOPRG00000004327	POP5	87	95.946	Ochotona_princeps
ENSG00000167272	POP5	99	79.630	ENSODEG00000010351	-	88	86.429	Octodon_degus
ENSG00000167272	POP5	100	86.391	ENSODEG00000006549	-	88	94.595	Octodon_degus
ENSG00000167272	POP5	94	55.195	ENSONIG00000011172	pop5	85	56.338	Oreochromis_niloticus
ENSG00000167272	POP5	67	69.565	ENSOANG00000001792	-	81	78.261	Ornithorhynchus_anatinus
ENSG00000167272	POP5	99	87.574	ENSOCUG00000006537	POP5	87	93.919	Oryctolagus_cuniculus
ENSG00000167272	POP5	100	49.080	ENSORLG00000014745	pop5	86	53.521	Oryzias_latipes
ENSG00000167272	POP5	100	49.080	ENSORLG00020001168	pop5	85	53.521	Oryzias_latipes_hni
ENSG00000167272	POP5	85	55.396	ENSORLG00015013535	pop5	82	55.396	Oryzias_latipes_hsok
ENSG00000167272	POP5	100	49.693	ENSOMEG00000017643	pop5	85	54.225	Oryzias_melastigma
ENSG00000167272	POP5	93	93.377	ENSOGAG00000008528	POP5	91	93.919	Otolemur_garnettii
ENSG00000167272	POP5	100	87.209	ENSOARG00000012764	POP5	87	93.333	Ovis_aries
ENSG00000167272	POP5	100	100.000	ENSPPAG00000043719	POP5	100	100.000	Pan_paniscus
ENSG00000167272	POP5	100	86.471	ENSPPRG00000006474	POP5	87	93.919	Panthera_pardus
ENSG00000167272	POP5	100	86.471	ENSPTIG00000012194	POP5	87	93.919	Panthera_tigris_altaica
ENSG00000167272	POP5	100	100.000	ENSPTRG00000005543	POP5	100	100.000	Pan_troglodytes
ENSG00000167272	POP5	100	100.000	ENSPANG00000014166	POP5	100	100.000	Papio_anubis
ENSG00000167272	POP5	91	56.376	ENSPKIG00000025154	pop5	89	56.757	Paramormyrops_kingsleyae
ENSG00000167272	POP5	64	73.832	ENSPSIG00000013154	POP5	72	78.652	Pelodiscus_sinensis
ENSG00000167272	POP5	100	50.920	ENSPMGG00000000812	-	89	53.741	Periophthalmus_magnuspinnatus
ENSG00000167272	POP5	100	85.207	ENSPEMG00000017493	Pop5	88	91.892	Peromyscus_maniculatus_bairdii
ENSG00000167272	POP5	91	57.333	ENSPFOG00000013000	pop5	94	58.416	Poecilia_formosa
ENSG00000167272	POP5	87	57.042	ENSPLAG00000014070	pop5	85	57.042	Poecilia_latipinna
ENSG00000167272	POP5	90	57.143	ENSPMEG00000012863	POP5	88	57.143	Poecilia_mexicana
ENSG00000167272	POP5	90	57.143	ENSPMEG00000024039	pop5	88	57.143	Poecilia_mexicana
ENSG00000167272	POP5	87	58.451	ENSPREG00000020151	pop5	85	58.451	Poecilia_reticulata
ENSG00000167272	POP5	100	98.773	ENSPPYG00000005036	POP5	84	98.773	Pongo_abelii
ENSG00000167272	POP5	64	93.269	ENSPCAG00000004788	POP5	100	93.269	Procavia_capensis
ENSG00000167272	POP5	100	89.412	ENSPCOG00000017618	POP5	100	91.765	Propithecus_coquereli
ENSG00000167272	POP5	100	88.824	ENSPVAG00000002233	POP5	87	95.946	Pteropus_vampyrus
ENSG00000167272	POP5	94	55.195	ENSPNYG00000002679	pop5	85	56.338	Pundamilia_nyererei
ENSG00000167272	POP5	87	51.049	ENSPNAG00000012662	pop5	80	51.049	Pygocentrus_nattereri
ENSG00000167272	POP5	99	86.335	ENSRNOG00000001199	Pop5	88	91.216	Rattus_norvegicus
ENSG00000167272	POP5	96	98.077	ENSRBIG00000043505	POP5	99	98.077	Rhinopithecus_bieti
ENSG00000167272	POP5	100	98.773	ENSRROG00000045063	POP5	100	98.773	Rhinopithecus_roxellana
ENSG00000167272	POP5	100	98.773	ENSSBOG00000032691	POP5	100	98.773	Saimiri_boliviensis_boliviensis
ENSG00000167272	POP5	91	54.362	ENSSFOG00015005630	pop5	87	55.970	Scleropages_formosus
ENSG00000167272	POP5	94	51.923	ENSSMAG00000018868	pop5	82	58.571	Scophthalmus_maximus
ENSG00000167272	POP5	96	52.229	ENSSDUG00000001282	-	85	55.634	Seriola_dumerili
ENSG00000167272	POP5	96	51.592	ENSSLDG00000017031	pop5	85	54.930	Seriola_lalandi_dorsalis
ENSG00000167272	POP5	96	51.592	ENSSLDG00000003801	-	85	54.930	Seriola_lalandi_dorsalis
ENSG00000167272	POP5	64	96.154	ENSSARG00000005564	POP5	64	96.154	Sorex_araneus
ENSG00000167272	POP5	91	73.826	ENSSPUG00000015531	POP5	85	75.352	Sphenodon_punctatus
ENSG00000167272	POP5	93	56.579	ENSSPAG00000015306	pop5	85	59.155	Stegastes_partitus
ENSG00000167272	POP5	100	88.824	ENSSSCG00000009912	POP5	87	94.595	Sus_scrofa
ENSG00000167272	POP5	96	68.153	ENSTGUG00000009602	POP5	87	71.127	Taeniopygia_guttata
ENSG00000167272	POP5	98	54.321	ENSTRUG00000016214	pop5	86	56.338	Takifugu_rubripes
ENSG00000167272	POP5	98	53.125	ENSTNIG00000011465	pop5	86	57.241	Tetraodon_nigroviridis
ENSG00000167272	POP5	100	88.166	ENSTBEG00000010131	POP5	88	95.270	Tupaia_belangeri
ENSG00000167272	POP5	100	89.412	ENSTTRG00000000153	POP5	87	95.270	Tursiops_truncatus
ENSG00000167272	POP5	96	86.585	ENSUAMG00000015541	POP5	66	90.845	Ursus_americanus
ENSG00000167272	POP5	100	87.059	ENSUMAG00000006137	POP5	87	91.216	Ursus_maritimus
ENSG00000167272	POP5	100	87.647	ENSVPAG00000010365	POP5	87	93.243	Vicugna_pacos
ENSG00000167272	POP5	100	88.824	ENSVVUG00000021154	POP5	87	92.568	Vulpes_vulpes
ENSG00000167272	POP5	63	66.990	ENSXETG00000031793	POP5	85	68.367	Xenopus_tropicalis
ENSG00000167272	POP5	87	59.155	ENSXMAG00000003508	-	74	59.155	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	21873635.	IBA	Component
GO:0000172	ribonuclease MRP complex	16723659.	IDA	Component
GO:0001682	tRNA 5'-leader removal	16723659.30454648.	IDA	Process
GO:0001682	tRNA 5'-leader removal	-	TAS	Process
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	16723659.30454648.	IDA	Function
GO:0005515	protein binding	15096576.22458338.25416956.	IPI	Function
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0030681	multimeric ribonuclease P complex	16723659.30454648.	IDA	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process