EuRBPDB

Description

Ensembl ID: ENSG00000167394 (Gene tree)
Gene ID: 79759
Gene Symbol: ZNF668
Alias: FLJ13479
Full Name: zinc finger protein 668
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 13,478 bases
Position: chr16:31,060,843-31,074,320
Accession: 25821
RBP type: non-canonical RBP
Summary: (Zinc Finger Protein 668) is a Protein Coding gene. Diseases associated with ZNF668 include Nodular Malignant Melanoma. Among its related pathways are Gene Expression. Gene Ontology (GO) annotations related to this gene include DNA-binding transcription factor activity. An important paralog of this gene is ZNF850.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000538906	ZNF668-208	2865	-	ENSP00000440149	619 (aa)	-	Q96K58
ENST00000564456	ZNF668-210	562	-	-	- (aa)	-	-
ENST00000300849	ZNF668-201	2762	-	ENSP00000300849	619 (aa)	-	Q96K58
ENST00000414399	ZNF668-203	400	-	ENSP00000412340	108 (aa)	-	C9J092
ENST00000535577	ZNF668-207	2396	-	ENSP00000441349	619 (aa)	-	Q96K58
ENST00000394983	ZNF668-202	2717	-	ENSP00000378434	619 (aa)	-	Q96K58
ENST00000539836	ZNF668-209	2469	-	ENSP00000442573	642 (aa)	-	Q96K58
ENST00000426488	ZNF668-205	2282	-	ENSP00000403975	642 (aa)	-	Q96K58
ENST00000442862	ZNF668-206	802	-	ENSP00000416853	163 (aa)	-	C9JCJ0
ENST00000417935	ZNF668-204	386	-	ENSP00000390671	92 (aa)	-	C9JG35

Gene Model

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000167394	rs9927295	16	31066088	A	Highest math class taken (MTAG)	30038396	[0.008-0.0158] unit decrease	0.0119	EFO_0004875

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	IEA	Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISA	Function
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function