EuRBPDB

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  • Description
  • RBDs
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000168495 (Gene tree)
Gene ID
661
Gene Symbol
POLR3D
Alias
TSBN51|RPC4|BN51T
Full Name
RNA polymerase III subunit D
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
9,497 bases
Position
chr8:22,245,104-22,254,600
Accession
1080
RBP type
canonical RBP
Summary
This gene complements a temperature-sensitive mutant isolated from the BHK-21 Syrian hamster cell line. It leads to a block in progression through the G1 phase of the cell cycle at nonpermissive temperatures. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000303088RNA_pol_Rpc4PF05132.147.6e-2811
ENSP00000380904RNA_pol_Rpc4PF05132.147.6e-2811

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
26797132Ty1 Integrase Interacts with RNA Polymerase III-specific Subcomplexes to Promote Insertion of Ty1 Elements Upstream of Polymerase (Pol) III-transcribed Genes.J Biol Chem2016 Mar 18Cheung Sdoi: 10.1074/jbc.M115.686840
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000518039POLR3D-2041202-ENSP00000429821123 (aa)-E7EQ68
ENST00000519237POLR3D-205683-ENSP00000429677207 (aa)-E5RHT4
ENST00000397802POLR3D-2025494-ENSP00000380904398 (aa)-P05423
ENST00000517789POLR3D-203841--- (aa)--
ENST00000306433POLR3D-2011931-ENSP00000303088398 (aa)-P05423
Gene Model
Click here to download ENSG00000168495's gene model file
Pathways
Pathway IDPathway NameSource
hsa03020RNA polymeraseKEGG
hsa04623Cytosolic DNA-sensing pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000168495's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000168495POLR3D9442.785ENSAPOG00000017634zgc:1719719342.683Acanthochromis_polyacanthus
ENSG00000168495POLR3D9463.265ENSAPOG00000012197polr3d9957.614Acanthochromis_polyacanthus
ENSG00000168495POLR3D10095.652ENSAMEG00000003221POLR3D9994.710Ailuropoda_melanoleuca
ENSG00000168495POLR3D9138.400ENSACIG00000003707zgc:1719719638.686Amphilophus_citrinellus
ENSG00000168495POLR3D9957.431ENSACIG00000017832polr3d9956.927Amphilophus_citrinellus
ENSG00000168495POLR3D9441.310ENSAOCG00000007733zgc:1719719041.562Amphiprion_ocellaris
ENSG00000168495POLR3D9362.609ENSAOCG00000005037polr3d9856.923Amphiprion_ocellaris
ENSG00000168495POLR3D9362.609ENSAPEG00000013751polr3d9857.949Amphiprion_percula
ENSG00000168495POLR3D9341.266ENSAPEG00000016107zgc:1719719041.519Amphiprion_percula
ENSG00000168495POLR3D9441.538ENSATEG00000023125zgc:1719719640.389Anabas_testudineus
ENSG00000168495POLR3D9857.692ENSATEG00000023119polr3d9857.179Anabas_testudineus
ENSG00000168495POLR3D8670.893ENSAPLG00000014393POLR3D10070.317Anas_platyrhynchos
ENSG00000168495POLR3D10079.710ENSACAG00000010592POLR3D9375.549Anolis_carolinensis
ENSG00000168495POLR3D10099.517ENSANAG00000030023POLR3D10098.744Aotus_nancymaae
ENSG00000168495POLR3D9858.524ENSACLG00000010147polr3d9858.015Astatotilapia_calliptera
ENSG00000168495POLR3D9041.081ENSACLG00000000074zgc:1719718841.779Astatotilapia_calliptera
ENSG00000168495POLR3D9161.247ENSAMXG00000010079polr3d9658.794Astyanax_mexicanus
ENSG00000168495POLR3D9054.464ENSAMXG00000019418zgc:1719719443.590Astyanax_mexicanus
ENSG00000168495POLR3D9896.667ENSBTAG00000010036POLR3D10092.462Bos_taurus
ENSG00000168495POLR3D10099.517ENSCJAG00000020278POLR3D9398.744Callithrix_jacchus
ENSG00000168495POLR3D10094.686ENSCAFG00000009455POLR3D10094.221Canis_familiaris
ENSG00000168495POLR3D10094.686ENSCAFG00020013027POLR3D10094.221Canis_lupus_dingo
ENSG00000168495POLR3D9897.500ENSCHIG00000012279POLR3D10092.211Capra_hircus
ENSG00000168495POLR3D10096.135ENSTSYG00000009055POLR3D10094.724Carlito_syrichta
ENSG00000168495POLR3D8695.044ENSCAPG00000010394POLR3D9994.000Cavia_aperea
ENSG00000168495POLR3D10094.203ENSCPOG00000003679POLR3D10093.719Cavia_porcellus
ENSG00000168495POLR3D10099.517ENSCCAG00000019817POLR3D10098.995Cebus_capucinus
ENSG00000168495POLR3D10099.517ENSCATG00000025950POLR3D10098.744Cercocebus_atys
ENSG00000168495POLR3D10095.169ENSCLAG00000014993POLR3D10094.221Chinchilla_lanigera
ENSG00000168495POLR3D10099.034ENSCSAG00000016525POLR3D10098.492Chlorocebus_sabaeus
ENSG00000168495POLR3D10096.135ENSCHOG00000000228POLR3D10085.176Choloepus_hoffmanni
ENSG00000168495POLR3D10083.654ENSCPBG00000001313POLR3D10080.050Chrysemys_picta_bellii
ENSG00000168495POLR3D9034.921ENSCING00000008141-9033.773Ciona_intestinalis
ENSG00000168495POLR3D9134.031ENSCSAVG00000007119-9033.509Ciona_savignyi
ENSG00000168495POLR3D10099.034ENSCANG00000043589POLR3D10097.739Colobus_angolensis_palliatus
ENSG00000168495POLR3D10094.724ENSCGRG00001010339Polr3d10094.724Cricetulus_griseus_chok1gshd
ENSG00000168495POLR3D10094.724ENSCGRG00000003956Polr3d10094.724Cricetulus_griseus_crigri
ENSG00000168495POLR3D9364.035ENSCSEG00000008123polr3d9855.612Cynoglossus_semilaevis
ENSG00000168495POLR3D9439.108ENSCSEG00000015509zgc:1719719139.108Cynoglossus_semilaevis
ENSG00000168495POLR3D9957.431ENSCVAG00000020687polr3d9956.927Cyprinodon_variegatus
ENSG00000168495POLR3D9937.313ENSCVAG00000009078-9836.567Cyprinodon_variegatus
ENSG00000168495POLR3D9548.305ENSDARG00000042054zgc:1719719543.003Danio_rerio
ENSG00000168495POLR3D9358.221ENSDARG00000104516polr3d9459.030Danio_rerio
ENSG00000168495POLR3D10094.686ENSDNOG00000013488POLR3D10093.216Dasypus_novemcinctus
ENSG00000168495POLR3D10096.618ENSDORG00000011174Polr3d10094.975Dipodomys_ordii
ENSG00000168495POLR3D10091.787ENSETEG00000016516POLR3D10091.709Echinops_telfairi
ENSG00000168495POLR3D7440.606ENSEBUG00000014414polr3d8940.541Eptatretus_burgeri
ENSG00000168495POLR3D10096.135ENSEASG00005018824POLR3D10093.467Equus_asinus_asinus
ENSG00000168495POLR3D10096.135ENSECAG00000025090-10094.724Equus_caballus
ENSG00000168495POLR3D9794.118ENSEEUG00000007632POLR3D10089.698Erinaceus_europaeus
ENSG00000168495POLR3D9545.185ENSELUG00000017642zgc:1719719144.872Esox_lucius
ENSG00000168495POLR3D9159.836ENSELUG00000016978polr3d9859.694Esox_lucius
ENSG00000168495POLR3D10096.135ENSFCAG00000005346POLR3D10094.221Felis_catus
ENSG00000168495POLR3D8676.879ENSFALG00000010907POLR3D10076.301Ficedula_albicollis
ENSG00000168495POLR3D10093.467ENSFDAG00000010144POLR3D10093.467Fukomys_damarensis
ENSG00000168495POLR3D8939.037ENSFHEG00000003803-8738.503Fundulus_heteroclitus
ENSG00000168495POLR3D9562.121ENSFHEG00000000508polr3d9958.056Fundulus_heteroclitus
ENSG00000168495POLR3D9257.527ENSGMOG00000006293polr3d9957.641Gadus_morhua
ENSG00000168495POLR3D9148.990ENSGMOG00000015819zgc:1719719747.716Gadus_morhua
ENSG00000168495POLR3D8272.727ENSGALG00000032501-6571.515Gallus_gallus
ENSG00000168495POLR3D9858.481ENSGAFG00000010268polr3d9957.975Gambusia_affinis
ENSG00000168495POLR3D8939.894ENSGAFG00000009259zgc:1719719738.313Gambusia_affinis
ENSG00000168495POLR3D9445.244ENSGACG00000015436zgc:1719719843.137Gasterosteus_aculeatus
ENSG00000168495POLR3D9462.931ENSGACG00000011126polr3d9858.312Gasterosteus_aculeatus
ENSG00000168495POLR3D10083.173ENSGAGG00000023229POLR3D10079.950Gopherus_agassizii
ENSG00000168495POLR3D10099.749ENSGGOG00000007302POLR3D10099.749Gorilla_gorilla
ENSG00000168495POLR3D9858.524ENSHBUG00000012288polr3d9858.015Haplochromis_burtoni
ENSG00000168495POLR3D9041.333ENSHBUG00000020493zgc:1719719640.960Haplochromis_burtoni
ENSG00000168495POLR3D10092.754ENSHGLG00000015415POLR3D10089.950Heterocephalus_glaber_female
ENSG00000168495POLR3D10092.754ENSHGLG00100014950POLR3D10089.950Heterocephalus_glaber_male
ENSG00000168495POLR3D9137.333ENSHCOG00000018819-9836.386Hippocampus_comes
ENSG00000168495POLR3D9857.252ENSHCOG00000002228polr3d9956.743Hippocampus_comes
ENSG00000168495POLR3D9756.750ENSIPUG00000003480polr3d9955.528Ictalurus_punctatus
ENSG00000168495POLR3D8954.545ENSIPUG00000008608zgc:1719719744.140Ictalurus_punctatus
ENSG00000168495POLR3D10094.686ENSSTOG00000016519POLR3D10092.965Ictidomys_tridecemlineatus
ENSG00000168495POLR3D10093.720ENSJJAG00000006743Polr3d10092.462Jaculus_jaculus
ENSG00000168495POLR3D9564.167ENSKMAG00000005145polr3d9860.000Kryptolebias_marmoratus
ENSG00000168495POLR3D8945.685ENSLBEG00000009545zgc:1719718743.200Labrus_bergylta
ENSG00000168495POLR3D9857.436ENSLBEG00000003430polr3d9857.179Labrus_bergylta
ENSG00000168495POLR3D9880.165ENSLACG00000016654POLR3D10075.500Latimeria_chalumnae
ENSG00000168495POLR3D9468.718ENSLOCG00000016080polr3d9964.484Lepisosteus_oculatus
ENSG00000168495POLR3D9546.354ENSLOCG00000006467zgc:1719719546.292Lepisosteus_oculatus
ENSG00000168495POLR3D10094.686ENSLAFG00000001562POLR3D10093.719Loxodonta_africana
ENSG00000168495POLR3D10099.517ENSMFAG00000029141POLR3D10098.744Macaca_fascicularis
ENSG00000168495POLR3D10099.517ENSMMUG00000023226POLR3D10098.492Macaca_mulatta
ENSG00000168495POLR3D10099.517ENSMNEG00000039410POLR3D10098.744Macaca_nemestrina
ENSG00000168495POLR3D10099.517ENSMLEG00000031413POLR3D10098.744Mandrillus_leucophaeus
ENSG00000168495POLR3D9660.313ENSMAMG00000008914polr3d9759.694Mastacembelus_armatus
ENSG00000168495POLR3D9440.050ENSMAMG00000020617zgc:1719719839.379Mastacembelus_armatus
ENSG00000168495POLR3D9041.081ENSMZEG00005003175zgc:1719718841.779Maylandia_zebra
ENSG00000168495POLR3D9858.524ENSMZEG00005011442polr3d9858.015Maylandia_zebra
ENSG00000168495POLR3D9896.667ENSMAUG00000006844Polr3d10092.965Mesocricetus_auratus
ENSG00000168495POLR3D10095.169ENSMICG00000001049POLR3D10094.724Microcebus_murinus
ENSG00000168495POLR3D10092.965ENSMOCG00000005195Polr3d10092.965Microtus_ochrogaster
ENSG00000168495POLR3D9856.500ENSMMOG00000013845polr3d9856.000Mola_mola
ENSG00000168495POLR3D9291.579ENSMODG00000009491POLR3D9687.027Monodelphis_domestica
ENSG00000168495POLR3D9856.234ENSMALG00000002928polr3d9956.234Monopterus_albus
ENSG00000168495POLR3D9748.837ENSMALG00000005659zgc:1719719739.416Monopterus_albus
ENSG00000168495POLR3D9896.667MGP_CAROLIEiJ_G0019481Polr3d10093.970Mus_caroli
ENSG00000168495POLR3D9896.667ENSMUSG00000000776Polr3d10093.970Mus_musculus
ENSG00000168495POLR3D10089.196MGP_PahariEiJ_G0030498Polr3d10089.196Mus_pahari
ENSG00000168495POLR3D9896.667MGP_SPRETEiJ_G0020373Polr3d10093.719Mus_spretus
ENSG00000168495POLR3D10096.135ENSMPUG00000003653POLR3D10094.472Mustela_putorius_furo
ENSG00000168495POLR3D10094.686ENSMLUG00000002109POLR3D10094.472Myotis_lucifugus
ENSG00000168495POLR3D10094.472ENSNGAG00000013872Polr3d10094.720Nannospalax_galili
ENSG00000168495POLR3D9858.228ENSNBRG00000019106polr3d9858.015Neolamprologus_brichardi
ENSG00000168495POLR3D8235.650ENSNBRG00000022951zgc:1719718235.522Neolamprologus_brichardi
ENSG00000168495POLR3D10089.855ENSMEUG00000000465POLR3D10086.432Notamacropus_eugenii
ENSG00000168495POLR3D10095.652ENSOPRG00000013146POLR3D10094.472Ochotona_princeps
ENSG00000168495POLR3D10094.203ENSODEG00000005884POLR3D10092.000Octodon_degus
ENSG00000168495POLR3D9859.033ENSONIG00000010634polr3d9858.524Oreochromis_niloticus
ENSG00000168495POLR3D9640.150ENSONIG00000007280zgc:1719719540.943Oreochromis_niloticus
ENSG00000168495POLR3D9979.146ENSOANG00000010776POLR3D9980.402Ornithorhynchus_anatinus
ENSG00000168495POLR3D10093.237ENSOCUG00000017410POLR3D10092.714Oryctolagus_cuniculus
ENSG00000168495POLR3D9854.569ENSORLG00000011583polr3d9954.061Oryzias_latipes
ENSG00000168495POLR3D9359.829ENSORLG00020005668polr3d9954.315Oryzias_latipes_hni
ENSG00000168495POLR3D9356.065ENSORLG00015020291polr3d9253.369Oryzias_latipes_hsok
ENSG00000168495POLR3D9357.838ENSOMEG00000010120polr3d9855.216Oryzias_melastigma
ENSG00000168495POLR3D10093.720ENSOGAG00000004912POLR3D10092.462Otolemur_garnettii
ENSG00000168495POLR3D7555.369ENSOARG00000009142-10053.094Ovis_aries
ENSG00000168495POLR3D9897.500ENSOARG00000010372-8091.709Ovis_aries
ENSG00000168495POLR3D100100.000ENSPPAG00000029591POLR3D10099.749Pan_paniscus
ENSG00000168495POLR3D10096.135ENSPPRG00000022827POLR3D10094.221Panthera_pardus
ENSG00000168495POLR3D10095.652ENSPTIG00000018239POLR3D10093.970Panthera_tigris_altaica
ENSG00000168495POLR3D100100.000ENSPTRG00000020056POLR3D100100.000Pan_troglodytes
ENSG00000168495POLR3D10099.517ENSPANG00000009440POLR3D10098.744Papio_anubis
ENSG00000168495POLR3D9371.304ENSPKIG00000006727polr3d9862.217Paramormyrops_kingsleyae
ENSG00000168495POLR3D9849.114ENSPKIG00000025283zgc:1719719449.487Paramormyrops_kingsleyae
ENSG00000168495POLR3D9884.167ENSPSIG00000006113POLR3D10076.675Pelodiscus_sinensis
ENSG00000168495POLR3D9563.248ENSPMGG00000021658polr3d9857.179Periophthalmus_magnuspinnatus
ENSG00000168495POLR3D10093.720ENSPEMG00000023314Polr3d10093.216Peromyscus_maniculatus_bairdii
ENSG00000168495POLR3D9655.200ENSPMAG00000001455polr3d9853.009Petromyzon_marinus
ENSG00000168495POLR3D10089.855ENSPCIG00000012699POLR3D10086.432Phascolarctos_cinereus
ENSG00000168495POLR3D8939.683ENSPFOG00000011089zgc:1719719738.072Poecilia_formosa
ENSG00000168495POLR3D9856.927ENSPFOG00000012698polr3d9957.935Poecilia_formosa
ENSG00000168495POLR3D8936.658ENSPLAG00000003645zgc:1719719535.294Poecilia_latipinna
ENSG00000168495POLR3D9856.423ENSPLAG00000008149polr3d9957.431Poecilia_latipinna
ENSG00000168495POLR3D9857.431ENSPMEG00000002702polr3d9956.373Poecilia_mexicana
ENSG00000168495POLR3D8939.683ENSPMEG00000016953zgc:1719719738.072Poecilia_mexicana
ENSG00000168495POLR3D9247.967ENSPREG00000003755-9737.349Poecilia_reticulata
ENSG00000168495POLR3D9458.639ENSPREG00000007593polr3d9557.506Poecilia_reticulata
ENSG00000168495POLR3D10099.517ENSPPYG00000018419POLR3D10099.497Pongo_abelii
ENSG00000168495POLR3D10086.432ENSPCAG00000001971POLR3D10086.432Procavia_capensis
ENSG00000168495POLR3D10096.135ENSPCOG00000028134POLR3D10094.975Propithecus_coquereli
ENSG00000168495POLR3D10095.169ENSPVAG00000009873POLR3D10094.221Pteropus_vampyrus
ENSG00000168495POLR3D9749.600ENSPNYG00000008902zgc:1719718838.082Pundamilia_nyererei
ENSG00000168495POLR3D9858.524ENSPNYG00000016306polr3d9858.015Pundamilia_nyererei
ENSG00000168495POLR3D9159.511ENSPNAG00000022324polr3d9858.145Pygocentrus_nattereri
ENSG00000168495POLR3D9451.282ENSPNAG00000018934zgc:1719719543.291Pygocentrus_nattereri
ENSG00000168495POLR3D10094.472ENSRNOG00000010028Polr3d10094.472Rattus_norvegicus
ENSG00000168495POLR3D10099.517ENSRBIG00000035406POLR3D10098.492Rhinopithecus_bieti
ENSG00000168495POLR3D10099.517ENSRROG00000037278POLR3D10098.492Rhinopithecus_roxellana
ENSG00000168495POLR3D10099.517ENSSBOG00000024956POLR3D10098.744Saimiri_boliviensis_boliviensis
ENSG00000168495POLR3D8687.791ENSSHAG00000018257POLR3D10086.919Sarcophilus_harrisii
ENSG00000168495POLR3D9365.816ENSSFOG00015010611polr3d9959.360Scleropages_formosus
ENSG00000168495POLR3D9044.772ENSSFOG00015011547zgc:1719719745.528Scleropages_formosus
ENSG00000168495POLR3D9856.266ENSSMAG00000006271polr3d9856.266Scophthalmus_maximus
ENSG00000168495POLR3D9839.512ENSSMAG00000001465zgc:1719719639.512Scophthalmus_maximus
ENSG00000168495POLR3D9860.102ENSSDUG00000020718polr3d9859.591Seriola_dumerili
ENSG00000168495POLR3D9346.032ENSSDUG00000016019zgc:1719719640.385Seriola_dumerili
ENSG00000168495POLR3D9859.847ENSSLDG00000009643polr3d9859.335Seriola_lalandi_dorsalis
ENSG00000168495POLR3D9346.032ENSSLDG00000015968zgc:1719719640.144Seriola_lalandi_dorsalis
ENSG00000168495POLR3D10090.704ENSSARG00000012844POLR3D10090.704Sorex_araneus
ENSG00000168495POLR3D10082.692ENSSPUG00000000719POLR3D10078.697Sphenodon_punctatus
ENSG00000168495POLR3D9746.341ENSSPAG00000010384zgc:1719719639.303Stegastes_partitus
ENSG00000168495POLR3D9363.478ENSSPAG00000023326polr3d9858.462Stegastes_partitus
ENSG00000168495POLR3D9895.833ENSSSCG00000009622POLR3D10092.462Sus_scrofa
ENSG00000168495POLR3D9858.462ENSTRUG00000003555polr3d9857.801Takifugu_rubripes
ENSG00000168495POLR3D9258.967ENSTNIG00000006282polr3d9358.967Tetraodon_nigroviridis
ENSG00000168495POLR3D10095.652ENSTTRG00000012745POLR3D10093.970Tursiops_truncatus
ENSG00000168495POLR3D10094.686ENSUAMG00000026868POLR3D9893.855Ursus_americanus
ENSG00000168495POLR3D10094.203ENSUMAG00000005099POLR3D10093.970Ursus_maritimus
ENSG00000168495POLR3D10094.686ENSVVUG00000005290POLR3D10094.221Vulpes_vulpes
ENSG00000168495POLR3D9870.248ENSXETG00000010534polr3d9962.500Xenopus_tropicalis
ENSG00000168495POLR3D9357.867ENSXCOG00000015872polr3d9358.133Xiphophorus_couchianus
ENSG00000168495POLR3D9360.000ENSXMAG00000001872polr3d9459.467Xiphophorus_maculatus
ENSG00000168495POLR3D8940.212ENSXMAG00000014555-8840.476Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000790nuclear chromatin24107381.IDAComponent
GO:0001056RNA polymerase III activity21873635.IBAFunction
GO:0003677DNA binding-IEAFunction
GO:0003682chromatin binding-IEAFunction
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005666RNA polymerase III complex21873635.IBAComponent
GO:0005666RNA polymerase III complex24107381.IDAComponent
GO:0005829cytosol-IDAComponent
GO:0005829cytosol-TASComponent
GO:0006383transcription by RNA polymerase III-IEAProcess
GO:0016607nuclear speck-IDAComponent
GO:0032481positive regulation of type I interferon production-TASProcess
GO:0032728positive regulation of interferon-beta production19631370.IDAProcess
GO:0045087innate immune response-IEAProcess
GO:0045089positive regulation of innate immune response19631370.IDAProcess
GO:0051607defense response to virus-IEAProcess

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