EuRBPDB

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  • Basic Information
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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000171453 (Gene tree)
Gene ID
9533
Gene Symbol
POLR1C
Alias
RPA40|RPA39|RPA5|RPAC1
Full Name
RNA polymerase I and III subunit C
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
52,718 bases
Position
chr6:43,509,702-43,562,419
Accession
20194
RBP type
canonical RBP
Summary
The protein encoded by this gene is a subunit of both RNA polymerase I and RNA polymerase III complexes. The encoded protein is part of the Pol core element. Mutations in this gene have been associated with Treacher Collins syndrome (TCS) and hypomyelinating leukodystrophy 11. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2016]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000496001RNA_pol_A_bacPF01000.264.3e-3011
ENSP00000496018RNA_pol_A_bacPF01000.265.1e-3011
ENSP00000307212RNA_pol_A_bacPF01000.266e-3011
ENSP00000496683RNA_pol_A_bacPF01000.266e-3011
ENSP00000361465RNA_pol_A_bacPF01000.266.2e-3011
ENSP00000496044RNA_pol_A_bacPF01000.266.2e-3011
ENSP00000494368RNA_pol_A_bacPF01000.266.4e-3011
ENSP00000361419RNA_pol_A_bacPF01000.264.8e-2711
ENSP00000494529RNA_pol_A_bacPF01000.264.8e-2711
ENSP00000395401RNA_pol_A_bacPF01000.267.8e-1411
ENSP00000409536RNA_pol_A_bacPF01000.263e-0711
ENSP00000496001RNA_pol_LPF01193.242.2e-2211
ENSP00000361419RNA_pol_LPF01193.242.7e-2211
ENSP00000494529RNA_pol_LPF01193.242.7e-2211
ENSP00000361465RNA_pol_LPF01193.243.9e-2211
ENSP00000496044RNA_pol_LPF01193.243.9e-2211
ENSP00000494368RNA_pol_LPF01193.249.8e-1111
ENSP00000496018RNA_pol_LPF01193.241.5e-1011
ENSP00000307212RNA_pol_LPF01193.241.6e-1011
ENSP00000496683RNA_pol_LPF01193.241.6e-1011
ENSP00000395401RNA_pol_LPF01193.242e-1011
ENSP00000409536RNA_pol_LPF01193.241.3e-0911
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000512472POLR1C-209569--- (aa)--
ENST00000642195POLR1C-2111275-ENSP00000496044346 (aa)-O15160
ENST00000304004POLR1C-2011280-ENSP00000307212342 (aa)-O15160
ENST00000646700POLR1C-2172444-ENSP00000495521307 (aa)-A0A2R8YEZ4
ENST00000643799POLR1C-2131085-ENSP00000494529296 (aa)-E7EQB9
ENST00000372389POLR1C-2031355-ENSP00000361465346 (aa)-O15160
ENST00000481352POLR1C-2071725--- (aa)--
ENST00000607635POLR1C-2102118-ENSP00000496683342 (aa)-O15160
ENST00000428025POLR1C-205576-ENSP00000395401124 (aa)-D6RDJ3
ENST00000423780POLR1C-204418-ENSP00000409536140 (aa)-H0Y723
ENST00000372344POLR1C-2021119-ENSP00000361419296 (aa)-E7EQB9
ENST00000646433POLR1C-2161786-ENSP00000494368343 (aa)-A0A2R8Y5D3
ENST00000455605POLR1C-2061882--- (aa)--
ENST00000646188POLR1C-2151221-ENSP00000496001291 (aa)-A0A2R8YEY5
ENST00000488601POLR1C-208973--- (aa)--
ENST00000645141POLR1C-2141334-ENSP00000496755151 (aa)-A0A2R8Y8D6
ENST00000643341POLR1C-2121962XM_011515000ENSP00000496018307 (aa)XP_011513302A0A2R8YEZ4
Gene Model
Click here to download ENSG00000171453's gene model file
Pathways
Pathway IDPathway NameSource
hsa03020RNA polymeraseKEGG
hsa04623Cytosolic DNA-sensing pathwayKEGG
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000171453rs201320592643520078AGLP-1 levels in response to oral glucose tolerance test (fasting)29093273[0.24-0.61] unit increase0.425EFO_0008465|EFO_0004307
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000171453's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000171453POLR1C7534.409ENSAPOG00000011708polr2c7630.493Acanthochromis_polyacanthus
ENSG00000171453POLR1C10074.237ENSAPOG00000024356polr1c10073.219Acanthochromis_polyacanthus
ENSG00000171453POLR1C7539.583ENSAMEG00000017026POLR2C6733.333Ailuropoda_melanoleuca
ENSG00000171453POLR1C10098.387ENSAMEG00000012205POLR1C9996.821Ailuropoda_melanoleuca
ENSG00000171453POLR1C10066.441ENSACIG00000016268polr1c9163.142Amphilophus_citrinellus
ENSG00000171453POLR1C9530.714ENSACIG00000012060polr2c8730.714Amphilophus_citrinellus
ENSG00000171453POLR1C7534.375ENSAOCG00000015665polr2c7630.493Amphiprion_ocellaris
ENSG00000171453POLR1C10072.203ENSAOCG00000011687polr1c9771.510Amphiprion_ocellaris
ENSG00000171453POLR1C7534.375ENSAOCG00000010477-7630.493Amphiprion_ocellaris
ENSG00000171453POLR1C6333.333ENSAOCG00000018000-7231.683Amphiprion_ocellaris
ENSG00000171453POLR1C7534.375ENSAPEG00000007221polr2c7630.493Amphiprion_percula
ENSG00000171453POLR1C10072.203ENSAPEG00000002433polr1c10071.225Amphiprion_percula
ENSG00000171453POLR1C10074.194ENSATEG00000005985polr1c9973.926Anabas_testudineus
ENSG00000171453POLR1C9530.357ENSATEG00000007143polr2c8730.357Anabas_testudineus
ENSG00000171453POLR1C6337.037ENSAPLG00000005385POLR2C5933.333Anas_platyrhynchos
ENSG00000171453POLR1C9689.076ENSAPLG00000002908POLR1C10082.333Anas_platyrhynchos
ENSG00000171453POLR1C10081.759ENSACAG00000009764POLR1C8881.818Anolis_carolinensis
ENSG00000171453POLR1C7538.542ENSACAG00000007514-6732.821Anolis_carolinensis
ENSG00000171453POLR1C10098.969ENSANAG00000025805POLR1C10098.649Aotus_nancymaae
ENSG00000171453POLR1C7539.583ENSANAG00000005302POLR2C6733.333Aotus_nancymaae
ENSG00000171453POLR1C9530.000ENSACLG00000004854polr2c8730.000Astatotilapia_calliptera
ENSG00000171453POLR1C10075.806ENSACLG00000006573polr1c10073.064Astatotilapia_calliptera
ENSG00000171453POLR1C7533.333ENSAMXG00000012805polr2c8730.714Astyanax_mexicanus
ENSG00000171453POLR1C10079.839ENSAMXG00000012062polr1c9972.464Astyanax_mexicanus
ENSG00000171453POLR1C10097.581ENSBTAG00000018969POLR1C10097.110Bos_taurus
ENSG00000171453POLR1C7539.583ENSBTAG00000001856POLR2C6733.333Bos_taurus
ENSG00000171453POLR1C6937.079WBGene00007971rpb-36730.332Caenorhabditis_elegans
ENSG00000171453POLR1C9949.834WBGene00019275rpac-409446.459Caenorhabditis_elegans
ENSG00000171453POLR1C7539.583ENSCJAG00000012016POLR2C6733.333Callithrix_jacchus
ENSG00000171453POLR1C10098.625ENSCJAG00000005594POLR1C10098.311Callithrix_jacchus
ENSG00000171453POLR1C7539.583ENSCAFG00000008720POLR2C6733.333Canis_familiaris
ENSG00000171453POLR1C10097.938ENSCAFG00000001872POLR1C10097.399Canis_familiaris
ENSG00000171453POLR1C10097.938ENSCAFG00020012018POLR1C10097.399Canis_lupus_dingo
ENSG00000171453POLR1C7539.583ENSCAFG00020007660POLR2C6733.333Canis_lupus_dingo
ENSG00000171453POLR1C10097.260ENSCHIG00000004352POLR1C10096.830Capra_hircus
ENSG00000171453POLR1C7539.583ENSCHIG00000012072POLR2C6733.333Capra_hircus
ENSG00000171453POLR1C7539.583ENSTSYG00000011076POLR2C6733.333Carlito_syrichta
ENSG00000171453POLR1C10099.194ENSTSYG00000011921POLR1C10098.986Carlito_syrichta
ENSG00000171453POLR1C10097.581ENSCAPG00000015364POLR1C8896.656Cavia_aperea
ENSG00000171453POLR1C7539.583ENSCPOG00000004554POLR2C6733.333Cavia_porcellus
ENSG00000171453POLR1C10097.581ENSCPOG00000038098POLR1C10097.110Cavia_porcellus
ENSG00000171453POLR1C7539.583ENSCCAG00000035768POLR2C6733.333Cebus_capucinus
ENSG00000171453POLR1C10098.969ENSCCAG00000020169POLR1C10098.555Cebus_capucinus
ENSG00000171453POLR1C7539.583ENSCATG00000040803POLR2C6733.333Cercocebus_atys
ENSG00000171453POLR1C10099.313ENSCATG00000044045POLR1C10099.133Cercocebus_atys
ENSG00000171453POLR1C7539.583ENSCLAG00000013676POLR2C6733.333Chinchilla_lanigera
ENSG00000171453POLR1C10096.907ENSCLAG00000009266POLR1C10096.821Chinchilla_lanigera
ENSG00000171453POLR1C7539.583ENSCSAG00000004901POLR2C6733.333Chlorocebus_sabaeus
ENSG00000171453POLR1C10098.387ENSCSAG00000011913POLR1C10098.266Chlorocebus_sabaeus
ENSG00000171453POLR1C7396.226ENSCHOG00000006601POLR1C10096.226Choloepus_hoffmanni
ENSG00000171453POLR1C7132.967ENSCHOG00000002986POLR2C6432.065Choloepus_hoffmanni
ENSG00000171453POLR1C10087.097ENSCPBG00000025203POLR1C10085.549Chrysemys_picta_bellii
ENSG00000171453POLR1C6338.272ENSCPBG00000022758POLR2C6234.483Chrysemys_picta_bellii
ENSG00000171453POLR1C9862.810ENSCING00000003563-9954.493Ciona_intestinalis
ENSG00000171453POLR1C7432.990ENSCING00000021895-6531.633Ciona_intestinalis
ENSG00000171453POLR1C7134.066ENSCSAVG00000002167-6630.928Ciona_savignyi
ENSG00000171453POLR1C100100.000ENSCANG00000043167POLR1C10098.986Colobus_angolensis_palliatus
ENSG00000171453POLR1C7539.583ENSCANG00000034876POLR2C6733.333Colobus_angolensis_palliatus
ENSG00000171453POLR1C7637.113ENSCGRG00001019477Polr2c6733.846Cricetulus_griseus_chok1gshd
ENSG00000171453POLR1C10095.376ENSCGRG00001017533Polr1c10095.376Cricetulus_griseus_chok1gshd
ENSG00000171453POLR1C10095.189ENSCGRG00000013225Polr1c10095.318Cricetulus_griseus_crigri
ENSG00000171453POLR1C7637.113ENSCGRG00000013273Polr2c6733.846Cricetulus_griseus_crigri
ENSG00000171453POLR1C9530.357ENSCSEG00000001719polr2c8730.357Cynoglossus_semilaevis
ENSG00000171453POLR1C10074.194ENSCSEG00000018097polr1c10072.046Cynoglossus_semilaevis
ENSG00000171453POLR1C9269.173ENSCVAG00000009585polr1c8870.677Cyprinodon_variegatus
ENSG00000171453POLR1C7534.375ENSCVAG00000017931polr2c7432.308Cyprinodon_variegatus
ENSG00000171453POLR1C7369.811ENSCVAG00000005684polr1c8868.950Cyprinodon_variegatus
ENSG00000171453POLR1C9530.714ENSCVAG00000004718-8730.714Cyprinodon_variegatus
ENSG00000171453POLR1C9976.423ENSDARG00000039400polr1c9671.470Danio_rerio
ENSG00000171453POLR1C7535.417ENSDARG00000033596polr2c6732.308Danio_rerio
ENSG00000171453POLR1C10098.387ENSDNOG00000042693POLR1C10096.821Dasypus_novemcinctus
ENSG00000171453POLR1C7539.583ENSDNOG00000030752-5334.737Dasypus_novemcinctus
ENSG00000171453POLR1C7539.583ENSDORG00000000081Polr2c6733.333Dipodomys_ordii
ENSG00000171453POLR1C10097.581ENSDORG00000000429Polr1c10096.243Dipodomys_ordii
ENSG00000171453POLR1C9958.871FBgn0031657CG37569354.140Drosophila_melanogaster
ENSG00000171453POLR1C10095.161ENSETEG00000010807POLR1C10091.329Echinops_telfairi
ENSG00000171453POLR1C10077.419ENSEBUG00000013725polr1c9873.977Eptatretus_burgeri
ENSG00000171453POLR1C7539.583ENSEASG00005005406POLR2C6733.333Equus_asinus_asinus
ENSG00000171453POLR1C10097.595ENSEASG00005003338POLR1C10097.110Equus_asinus_asinus
ENSG00000171453POLR1C7539.583ENSECAG00000015818POLR2C6733.333Equus_caballus
ENSG00000171453POLR1C10097.251ENSECAG00000023516POLR1C10096.959Equus_caballus
ENSG00000171453POLR1C10097.595ENSEEUG00000005471POLR1C10097.110Erinaceus_europaeus
ENSG00000171453POLR1C7532.292ENSELUG00000012259polr2c7630.045Esox_lucius
ENSG00000171453POLR1C10076.613ENSELUG00000013027polr1c10072.046Esox_lucius
ENSG00000171453POLR1C7539.583ENSFCAG00000034622POLR2C6733.333Felis_catus
ENSG00000171453POLR1C10098.387ENSFCAG00000009735POLR1C10097.297Felis_catus
ENSG00000171453POLR1C7537.500ENSFALG00000006931POLR2C6731.795Ficedula_albicollis
ENSG00000171453POLR1C9885.950ENSFALG00000012111POLR1C10082.043Ficedula_albicollis
ENSG00000171453POLR1C10097.581ENSFDAG00000008428POLR1C10096.532Fukomys_damarensis
ENSG00000171453POLR1C6538.095ENSFDAG00000008641POLR2C6234.463Fukomys_damarensis
ENSG00000171453POLR1C9530.714ENSFHEG00000020739polr2c8730.714Fundulus_heteroclitus
ENSG00000171453POLR1C8980.000ENSFHEG00000013867-8770.950Fundulus_heteroclitus
ENSG00000171453POLR1C10072.581ENSFHEG00000000262polr1c10072.054Fundulus_heteroclitus
ENSG00000171453POLR1C9530.000ENSGMOG00000004203polr2c8730.000Gadus_morhua
ENSG00000171453POLR1C10075.806ENSGMOG00000013878polr1c10071.605Gadus_morhua
ENSG00000171453POLR1C7537.500ENSGALG00000001168POLR2C6732.308Gallus_gallus
ENSG00000171453POLR1C9986.179ENSGALG00000010349POLR1C10082.370Gallus_gallus
ENSG00000171453POLR1C10073.077ENSGAFG00000010153polr1c10072.080Gambusia_affinis
ENSG00000171453POLR1C9530.714ENSGAFG00000021951polr2c8730.714Gambusia_affinis
ENSG00000171453POLR1C10071.525ENSGACG00000002453polr1c9871.802Gasterosteus_aculeatus
ENSG00000171453POLR1C7533.333ENSGACG00000002194polr2c6731.282Gasterosteus_aculeatus
ENSG00000171453POLR1C6338.272ENSGAGG00000016942POLR2C5835.057Gopherus_agassizii
ENSG00000171453POLR1C10087.097ENSGAGG00000010640POLR1C10085.549Gopherus_agassizii
ENSG00000171453POLR1C100100.000ENSGGOG00000010903POLR1C100100.000Gorilla_gorilla
ENSG00000171453POLR1C7539.583ENSGGOG00000012415POLR2C6733.333Gorilla_gorilla
ENSG00000171453POLR1C9530.000ENSHBUG00000023040polr2c8730.000Haplochromis_burtoni
ENSG00000171453POLR1C10065.130ENSHBUG00000017816polr1c10065.130Haplochromis_burtoni
ENSG00000171453POLR1C7539.583ENSHGLG00000013465POLR2C6733.333Heterocephalus_glaber_female
ENSG00000171453POLR1C10097.581ENSHGLG00000019441POLR1C10095.665Heterocephalus_glaber_female
ENSG00000171453POLR1C7539.583ENSHGLG00100011949POLR2C6733.333Heterocephalus_glaber_male
ENSG00000171453POLR1C10097.581ENSHGLG00100005970POLR1C10095.665Heterocephalus_glaber_male
ENSG00000171453POLR1C9530.000ENSHCOG00000007066polr2c8730.000Hippocampus_comes
ENSG00000171453POLR1C9969.759ENSHCOG00000002179polr1c9968.786Hippocampus_comes
ENSG00000171453POLR1C7535.417ENSIPUG00000009231polr2c8730.357Ictalurus_punctatus
ENSG00000171453POLR1C10079.839ENSIPUG00000024464polr1c9773.964Ictalurus_punctatus
ENSG00000171453POLR1C7539.583ENSSTOG00000015150-6733.333Ictidomys_tridecemlineatus
ENSG00000171453POLR1C10098.625ENSSTOG00000010631POLR1C10098.266Ictidomys_tridecemlineatus
ENSG00000171453POLR1C7334.653ENSSTOG00000031354-6034.286Ictidomys_tridecemlineatus
ENSG00000171453POLR1C10097.581ENSJJAG00000023110Polr1c10096.243Jaculus_jaculus
ENSG00000171453POLR1C7539.583ENSJJAG00000023057Polr2c6733.333Jaculus_jaculus
ENSG00000171453POLR1C9531.071ENSKMAG00000016196polr2c8731.071Kryptolebias_marmoratus
ENSG00000171453POLR1C10075.000ENSKMAG00000014305polr1c9972.203Kryptolebias_marmoratus
ENSG00000171453POLR1C10072.656ENSLBEG00000014925polr1c10071.510Labrus_bergylta
ENSG00000171453POLR1C9530.000ENSLBEG00000007369polr2c8730.000Labrus_bergylta
ENSG00000171453POLR1C9770.732ENSLACG00000012567POLR1C9863.253Latimeria_chalumnae
ENSG00000171453POLR1C10082.258ENSLOCG00000016710polr1c9675.216Lepisosteus_oculatus
ENSG00000171453POLR1C9531.429ENSLOCG00000003215polr2c9030.070Lepisosteus_oculatus
ENSG00000171453POLR1C10096.918ENSLAFG00000026248POLR1C10096.678Loxodonta_africana
ENSG00000171453POLR1C7539.583ENSLAFG00000027230POLR2C6832.821Loxodonta_africana
ENSG00000171453POLR1C7539.583ENSMFAG00000016861POLR2C6733.333Macaca_fascicularis
ENSG00000171453POLR1C10098.969ENSMFAG00000046295POLR1C10098.844Macaca_fascicularis
ENSG00000171453POLR1C7539.583ENSMMUG00000020474POLR2C6733.333Macaca_mulatta
ENSG00000171453POLR1C10098.969ENSMMUG00000015192POLR1C10098.844Macaca_mulatta
ENSG00000171453POLR1C7539.583ENSMNEG00000033565POLR2C6733.333Macaca_nemestrina
ENSG00000171453POLR1C10098.969ENSMNEG00000028073POLR1C10098.844Macaca_nemestrina
ENSG00000171453POLR1C10099.313ENSMLEG00000034818POLR1C10098.844Mandrillus_leucophaeus
ENSG00000171453POLR1C7539.583ENSMLEG00000032412POLR2C6733.333Mandrillus_leucophaeus
ENSG00000171453POLR1C10075.000ENSMAMG00000008700polr1c10071.795Mastacembelus_armatus
ENSG00000171453POLR1C9530.357ENSMAMG00000013205polr2c8730.357Mastacembelus_armatus
ENSG00000171453POLR1C9530.000ENSMZEG00005015329polr2c8730.000Maylandia_zebra
ENSG00000171453POLR1C10075.000ENSMZEG00005018545polr1c10072.727Maylandia_zebra
ENSG00000171453POLR1C10078.351ENSMGAG00000011020POLR1C10078.351Meleagris_gallopavo
ENSG00000171453POLR1C10096.220ENSMAUG00000014329Polr1c10095.954Mesocricetus_auratus
ENSG00000171453POLR1C6431.414ENSMAUG00000019031-7231.122Mesocricetus_auratus
ENSG00000171453POLR1C10097.581ENSMICG00000005027POLR1C10096.959Microcebus_murinus
ENSG00000171453POLR1C7539.583ENSMICG00000045178POLR2C6733.333Microcebus_murinus
ENSG00000171453POLR1C10096.091ENSMOCG00000017549Polr1c10095.954Microtus_ochrogaster
ENSG00000171453POLR1C7636.082ENSMOCG00000013652Polr2c6633.161Microtus_ochrogaster
ENSG00000171453POLR1C10067.742ENSMMOG00000005380polr1c9968.243Mola_mola
ENSG00000171453POLR1C9531.071ENSMMOG00000010560polr2c8731.071Mola_mola
ENSG00000171453POLR1C7539.583ENSMODG00000013540POLR2C6733.333Monodelphis_domestica
ENSG00000171453POLR1C10091.935ENSMODG00000018964POLR1C10091.409Monodelphis_domestica
ENSG00000171453POLR1C9530.357ENSMALG00000004581polr2c8730.357Monopterus_albus
ENSG00000171453POLR1C10076.613ENSMALG00000011711polr1c9972.542Monopterus_albus
ENSG00000171453POLR1C9789.399MGP_CAROLIEiJ_G0021662Polr1c10094.615Mus_caroli
ENSG00000171453POLR1C7637.113MGP_CAROLIEiJ_G0031409Polr2c6733.846Mus_caroli
ENSG00000171453POLR1C7637.113ENSMUSG00000031783Polr2c6733.846Mus_musculus
ENSG00000171453POLR1C10095.161ENSMUSG00000067148Polr1c10094.615Mus_musculus
ENSG00000171453POLR1C10094.355MGP_PahariEiJ_G0020654Polr1c10093.846Mus_pahari
ENSG00000171453POLR1C7637.113MGP_PahariEiJ_G0023007Polr2c6733.846Mus_pahari
ENSG00000171453POLR1C10095.161MGP_SPRETEiJ_G0022574Polr1c10095.000Mus_spretus
ENSG00000171453POLR1C7637.113MGP_SPRETEiJ_G0032528Polr2c6733.846Mus_spretus
ENSG00000171453POLR1C10098.387ENSMPUG00000012916POLR1C9197.399Mustela_putorius_furo
ENSG00000171453POLR1C7539.583ENSMPUG00000004483POLR2C6733.333Mustela_putorius_furo
ENSG00000171453POLR1C7539.583ENSMLUG00000025422-6733.333Myotis_lucifugus
ENSG00000171453POLR1C7536.842ENSMLUG00000029495-6731.443Myotis_lucifugus
ENSG00000171453POLR1C10098.625ENSMLUG00000017751POLR1C9998.555Myotis_lucifugus
ENSG00000171453POLR1C7539.583ENSMLUG00000015833-6733.333Myotis_lucifugus
ENSG00000171453POLR1C10095.954ENSNGAG00000023487Polr1c10095.954Nannospalax_galili
ENSG00000171453POLR1C7539.583ENSNGAG00000012249-6733.333Nannospalax_galili
ENSG00000171453POLR1C7534.375ENSNBRG00000003952polr2c5330.392Neolamprologus_brichardi
ENSG00000171453POLR1C10074.194ENSNBRG00000018742polr1c10073.064Neolamprologus_brichardi
ENSG00000171453POLR1C6631.000ENSNLEG00000003034POLR2C7531.000Nomascus_leucogenys
ENSG00000171453POLR1C100100.000ENSNLEG00000004035POLR1C10099.422Nomascus_leucogenys
ENSG00000171453POLR1C7533.333ENSMEUG00000014741POLR2C6730.769Notamacropus_eugenii
ENSG00000171453POLR1C10092.742ENSMEUG00000006778POLR1C10078.902Notamacropus_eugenii
ENSG00000171453POLR1C5942.466ENSOPRG00000006979POLR2C6731.188Ochotona_princeps
ENSG00000171453POLR1C10095.968ENSOPRG00000000145POLR1C10094.403Ochotona_princeps
ENSG00000171453POLR1C7593.151ENSODEG00000017109-10093.151Octodon_degus
ENSG00000171453POLR1C10095.968ENSODEG00000015831-10094.798Octodon_degus
ENSG00000171453POLR1C7539.583ENSODEG00000016934POLR2C6733.333Octodon_degus
ENSG00000171453POLR1C9530.000ENSONIG00000010914polr2c8730.000Oreochromis_niloticus
ENSG00000171453POLR1C10072.656ENSONIG00000013133polr1c9872.934Oreochromis_niloticus
ENSG00000171453POLR1C5036.923ENSOANG00000009337POLR2C6432.911Ornithorhynchus_anatinus
ENSG00000171453POLR1C10087.903ENSOANG00000003043POLR1C10085.549Ornithorhynchus_anatinus
ENSG00000171453POLR1C10098.387ENSOCUG00000005504POLR1C9997.977Oryctolagus_cuniculus
ENSG00000171453POLR1C7539.583ENSOCUG00000014984POLR2C6733.333Oryctolagus_cuniculus
ENSG00000171453POLR1C9530.714ENSORLG00000015108polr2c8730.714Oryzias_latipes
ENSG00000171453POLR1C10071.774ENSORLG00000019743polr1c9969.741Oryzias_latipes
ENSG00000171453POLR1C10072.581ENSORLG00020006489POLR1C9970.317Oryzias_latipes_hni
ENSG00000171453POLR1C9531.429ENSORLG00020013566polr2c8731.429Oryzias_latipes_hni
ENSG00000171453POLR1C7758.952ENSORLG00020005555polr1c6858.952Oryzias_latipes_hni
ENSG00000171453POLR1C9530.714ENSORLG00015003751polr2c8730.714Oryzias_latipes_hsok
ENSG00000171453POLR1C10070.513ENSORLG00015013322polr1c9969.741Oryzias_latipes_hsok
ENSG00000171453POLR1C9530.714ENSOMEG00000019444polr2c8730.714Oryzias_melastigma
ENSG00000171453POLR1C9871.972ENSOMEG00000016527polr1c9870.725Oryzias_melastigma
ENSG00000171453POLR1C7539.583ENSOGAG00000016866POLR2C6733.846Otolemur_garnettii
ENSG00000171453POLR1C10096.032ENSOGAG00000016318POLR1C10095.115Otolemur_garnettii
ENSG00000171453POLR1C7539.583ENSOARG00000000302POLR2C6733.333Ovis_aries
ENSG00000171453POLR1C10097.595ENSOARG00000007503POLR1C10097.110Ovis_aries
ENSG00000171453POLR1C5731.953ENSPPAG00000042822POLR2C6231.953Pan_paniscus
ENSG00000171453POLR1C100100.000ENSPPAG00000043678POLR1C100100.000Pan_paniscus
ENSG00000171453POLR1C7539.583ENSPPRG00000003215POLR2C6733.333Panthera_pardus
ENSG00000171453POLR1C10098.387ENSPPRG00000009760POLR1C10097.635Panthera_pardus
ENSG00000171453POLR1C7037.778ENSPTIG00000010297POLR2C6333.880Panthera_tigris_altaica
ENSG00000171453POLR1C10098.387ENSPTIG00000014813POLR1C10097.635Panthera_tigris_altaica
ENSG00000171453POLR1C100100.000ENSPTRG00000018202POLR1C100100.000Pan_troglodytes
ENSG00000171453POLR1C7539.583ENSPTRG00000008157POLR2C6733.333Pan_troglodytes
ENSG00000171453POLR1C7539.583ENSPANG00000006264POLR2C6733.333Papio_anubis
ENSG00000171453POLR1C10099.313ENSPANG00000009025POLR1C10098.986Papio_anubis
ENSG00000171453POLR1C10080.645ENSPKIG00000009858polr1c10075.216Paramormyrops_kingsleyae
ENSG00000171453POLR1C7533.333ENSPKIG00000005228polr2c6731.795Paramormyrops_kingsleyae
ENSG00000171453POLR1C6338.272ENSPSIG00000016112POLR2C6034.483Pelodiscus_sinensis
ENSG00000171453POLR1C10086.290ENSPSIG00000012580POLR1C9483.815Pelodiscus_sinensis
ENSG00000171453POLR1C7535.417ENSPMGG00000021249polr2c7434.715Periophthalmus_magnuspinnatus
ENSG00000171453POLR1C10074.194ENSPMGG00000012121polr1c9971.525Periophthalmus_magnuspinnatus
ENSG00000171453POLR1C10095.876ENSPEMG00000006970Polr1c10095.665Peromyscus_maniculatus_bairdii
ENSG00000171453POLR1C7637.113ENSPEMG00000014204Polr2c6733.846Peromyscus_maniculatus_bairdii
ENSG00000171453POLR1C10080.645ENSPMAG00000005560polr1c9872.303Petromyzon_marinus
ENSG00000171453POLR1C7535.417ENSPMAG00000004827polr2c8131.472Petromyzon_marinus
ENSG00000171453POLR1C10091.935ENSPCIG00000028137POLR1C10091.554Phascolarctos_cinereus
ENSG00000171453POLR1C7539.583ENSPCIG00000015111POLR2C6733.333Phascolarctos_cinereus
ENSG00000171453POLR1C10073.077ENSPFOG00000014342POLR1C10072.650Poecilia_formosa
ENSG00000171453POLR1C10073.077ENSPFOG00000014357polr1c9872.650Poecilia_formosa
ENSG00000171453POLR1C9530.714ENSPFOG00000024666polr2c8730.714Poecilia_formosa
ENSG00000171453POLR1C8980.800ENSPLAG00000003902polr1c9980.153Poecilia_latipinna
ENSG00000171453POLR1C9530.714ENSPLAG00000019750polr2c8730.714Poecilia_latipinna
ENSG00000171453POLR1C8265.272ENSPLAG00000004111polr1c9965.272Poecilia_latipinna
ENSG00000171453POLR1C9530.714ENSPMEG00000001741polr2c8730.714Poecilia_mexicana
ENSG00000171453POLR1C10073.387ENSPMEG00000011877-10072.650Poecilia_mexicana
ENSG00000171453POLR1C10073.387ENSPMEG00000008420polr1c10072.650Poecilia_mexicana
ENSG00000171453POLR1C10074.351ENSPREG00000007985polr1c10073.487Poecilia_reticulata
ENSG00000171453POLR1C5931.720ENSPREG00000003090polr2c6331.720Poecilia_reticulata
ENSG00000171453POLR1C100100.000ENSPPYG00000016645POLR1C10099.711Pongo_abelii
ENSG00000171453POLR1C7539.583ENSPPYG00000007390POLR2C6733.333Pongo_abelii
ENSG00000171453POLR1C5033.121ENSPCAG00000002423POLR2C6433.121Procavia_capensis
ENSG00000171453POLR1C7539.583ENSPCOG00000017282POLR2C6733.333Propithecus_coquereli
ENSG00000171453POLR1C10099.194ENSPCOG00000024628POLR1C10097.297Propithecus_coquereli
ENSG00000171453POLR1C7539.583ENSPVAG00000001399POLR2C6733.333Pteropus_vampyrus
ENSG00000171453POLR1C10088.150ENSPVAG00000005689POLR1C10088.150Pteropus_vampyrus
ENSG00000171453POLR1C10072.656ENSPNYG00000003620polr1c9972.206Pundamilia_nyererei
ENSG00000171453POLR1C9530.000ENSPNYG00000003756polr2c8730.000Pundamilia_nyererei
ENSG00000171453POLR1C10079.839ENSPNAG00000008443polr1c9973.043Pygocentrus_nattereri
ENSG00000171453POLR1C9530.714ENSPNAG00000012133polr2c8730.714Pygocentrus_nattereri
ENSG00000171453POLR1C7637.113ENSRNOG00000015720Polr2c6733.846Rattus_norvegicus
ENSG00000171453POLR1C10094.509ENSRNOG00000019079Polr1c10094.509Rattus_norvegicus
ENSG00000171453POLR1C7539.583ENSRBIG00000026549POLR2C6733.333Rhinopithecus_bieti
ENSG00000171453POLR1C100100.000ENSRBIG00000007155POLR1C10098.986Rhinopithecus_bieti
ENSG00000171453POLR1C100100.000ENSRROG00000000257POLR1C10099.324Rhinopithecus_roxellana
ENSG00000171453POLR1C7539.583ENSRROG00000045745POLR2C6733.333Rhinopithecus_roxellana
ENSG00000171453POLR1C5442.647YIL021WRPB35730.928Saccharomyces_cerevisiae
ENSG00000171453POLR1C10047.244YPR110CRPC409646.154Saccharomyces_cerevisiae
ENSG00000171453POLR1C10099.313ENSSBOG00000025735POLR1C10098.710Saimiri_boliviensis_boliviensis
ENSG00000171453POLR1C7539.583ENSSBOG00000030004POLR2C6733.333Saimiri_boliviensis_boliviensis
ENSG00000171453POLR1C10082.948ENSSHAG00000014456POLR1C10082.948Sarcophilus_harrisii
ENSG00000171453POLR1C10082.258ENSSFOG00015019860polr1c10074.352Scleropages_formosus
ENSG00000171453POLR1C9531.071ENSSFOG00015023460polr2c8731.071Scleropages_formosus
ENSG00000171453POLR1C10074.194ENSSMAG00000018865polr1c9972.754Scophthalmus_maximus
ENSG00000171453POLR1C9530.000ENSSMAG00000002827polr2c7130.714Scophthalmus_maximus
ENSG00000171453POLR1C9530.357ENSSDUG00000003354polr2c8730.357Seriola_dumerili
ENSG00000171453POLR1C10075.806ENSSDUG00000015745polr1c10072.391Seriola_dumerili
ENSG00000171453POLR1C10075.806ENSSLDG00000018285polr1c10072.054Seriola_lalandi_dorsalis
ENSG00000171453POLR1C9530.357ENSSLDG00000003555polr2c8730.357Seriola_lalandi_dorsalis
ENSG00000171453POLR1C9980.277ENSSPUG00000011822POLR1C9979.070Sphenodon_punctatus
ENSG00000171453POLR1C7538.542ENSSPUG00000012934POLR2C6732.308Sphenodon_punctatus
ENSG00000171453POLR1C10073.559ENSSPAG00000022369polr1c10072.365Stegastes_partitus
ENSG00000171453POLR1C7534.375ENSSPAG00000005108polr2c7630.493Stegastes_partitus
ENSG00000171453POLR1C7539.583ENSSSCG00000025454POLR2C6733.333Sus_scrofa
ENSG00000171453POLR1C10097.581ENSSSCG00000028007POLR1C9997.110Sus_scrofa
ENSG00000171453POLR1C9985.366ENSTGUG00000009159POLR1C9982.388Taeniopygia_guttata
ENSG00000171453POLR1C7537.500ENSTGUG00000004996POLR2C6731.795Taeniopygia_guttata
ENSG00000171453POLR1C7537.500ENSTGUG00000017035-7733.333Taeniopygia_guttata
ENSG00000171453POLR1C9530.714ENSTRUG00000004676polr2c8730.714Takifugu_rubripes
ENSG00000171453POLR1C10070.400ENSTRUG00000006264polr1c9969.828Takifugu_rubripes
ENSG00000171453POLR1C9530.714ENSTNIG00000008851polr2c8730.714Tetraodon_nigroviridis
ENSG00000171453POLR1C6198.876ENSTBEG00000002254POLR1C10098.876Tupaia_belangeri
ENSG00000171453POLR1C7538.542ENSTBEG00000009442POLR2C6732.821Tupaia_belangeri
ENSG00000171453POLR1C5332.484ENSTTRG00000010060POLR2C6432.484Tursiops_truncatus
ENSG00000171453POLR1C9095.057ENSTTRG00000006344POLR1C7695.057Tursiops_truncatus
ENSG00000171453POLR1C7539.583ENSUAMG00000014170POLR2C6733.333Ursus_americanus
ENSG00000171453POLR1C10098.387ENSUAMG00000025602POLR1C10097.399Ursus_americanus
ENSG00000171453POLR1C10098.387ENSUMAG00000005938POLR1C10097.399Ursus_maritimus
ENSG00000171453POLR1C6339.506ENSUMAG00000021686POLR2C6334.483Ursus_maritimus
ENSG00000171453POLR1C7539.583ENSVVUG00000023516-6532.990Vulpes_vulpes
ENSG00000171453POLR1C10097.581ENSVVUG00000028922POLR1C10097.297Vulpes_vulpes
ENSG00000171453POLR1C10079.839ENSXETG00000010882polr1c10077.522Xenopus_tropicalis
ENSG00000171453POLR1C6435.106ENSXETG00000013784polr2c6732.990Xenopus_tropicalis
ENSG00000171453POLR1C9530.714ENSXCOG00000020734polr2c8730.714Xiphophorus_couchianus
ENSG00000171453POLR1C10074.434ENSXCOG00000014185polr1c10073.276Xiphophorus_couchianus
ENSG00000171453POLR1C10073.718ENSXMAG00000015076polr1c10072.934Xiphophorus_maculatus
ENSG00000171453POLR1C9530.714ENSXMAG00000015984polr2c8730.714Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0001054RNA polymerase I activity21873635.IBAFunction
GO:0001056RNA polymerase III activity21873635.IBAFunction
GO:0003677DNA binding-IEAFunction
GO:0003899DNA-directed 5'-3' RNA polymerase activity9540830.TASFunction
GO:0005515protein binding16189514.21988832.25416956.27107012.IPIFunction
GO:0005634nucleus-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005666RNA polymerase III complex21873635.IBAComponent
GO:0005666RNA polymerase III complex24107381.IDAComponent
GO:0005736RNA polymerase I complex21873635.IBAComponent
GO:0005829cytosol-TASComponent
GO:0006360transcription by RNA polymerase I9540830.TASProcess
GO:0006361transcription initiation from RNA polymerase I promoter-TASProcess
GO:0006362transcription elongation from RNA polymerase I promoter-TASProcess
GO:0006363termination of RNA polymerase I transcription-TASProcess
GO:0006383transcription by RNA polymerase III-IEAProcess
GO:0032481positive regulation of type I interferon production-TASProcess
GO:0045815positive regulation of gene expression, epigenetic-TASProcess
GO:0046983protein dimerization activity-IEAFunction

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr643517372Missense_MutationnovelE46K0.05
ACCchr643520980Missense_MutationnovelR285I0.36
BLCAchr643521008Missense_MutationnovelK294N0.2
BLCAchr643520164Missense_MutationNAE161K0.41
BLCAchr6435170815'UTRnovel0.23
BLCAchr643520999Missense_MutationnovelE291D0.23
BLCAchr643521246SilentnovelL329L0.28
BLCAchr643520391Missense_MutationNAE207K0.19
BLCAchr643520083Missense_MutationnovelE134Q0.25
BRCAchr643517177Missense_Mutationrs745593101N23S0.22
BRCAchr643519423Nonsense_MutationNAR78*0.26RNA_pol_A_bac
BRCAchr643517129Missense_MutationnovelV7A0.05
BRCAchr643520701SilentNAP244P0.24
CESCchr6435171025'UTRnovel0.22
CESCchr6435170755'UTRnovel0.79
CESCchr643519381Missense_MutationNAD64H0.46RNA_pol_A_bac
CESCchr643517174Missense_Mutationrs149529196R22H0.27
CESCchr643520387SilentnovelG205G0.37
CESCchr643521263Missense_Mutationrs777698504R335H0.25
COADchr6435213623'UTRnovel0.14
COADchr643520064Splice_SitenovelX128_splice0.38
COADchr643520412Missense_MutationnovelC214R0.42
COADchr643520654Missense_MutationnovelA229T0.33
ESCAchr643520362In_Frame_DelnovelL198del0.24
ESCAchr643517116Missense_MutationnovelA3S0.58
ESCAchr643520300Frame_Shift_DelnovelL178Wfs*760.28
GBMchr643519399Missense_MutationnovelA70T0.16RNA_pol_A_bac
GBMchr643521230Frame_Shift_InsnovelE324Dfs*160.11
GBMchr643519729Missense_MutationnovelK91N0.08RNA_pol_A_bac
GBMchr643520744Missense_MutationnovelP259S0.42
GBMchr643520310Missense_MutationnovelN180H0.05
HNSCchr6435213653'UTRnovel0.2
HNSCchr643521218Missense_MutationnovelV320E0.19
LAMLchr643517126Missense_MutationNAA6V0.33
LIHCchr643519441Splice_SitenovelX83_splice0.33
LUADchr6435213753'UTRnovel0.08
LUADchr6435213773'UTRnovel0.08
LUADchr643520975SilentNAF283F0.27
OVchr6435214993'UTRnovel0.38
OVchr643519836Frame_Shift_DelnovelG128Efs*80.25
PRADchr643517146Missense_MutationNAR13G0.07
PRADchr643519718Missense_MutationnovelA88T0.39RNA_pol_A_bac
READchr643521033Nonsense_Mutationrs563473186R303*0.26
READchr6435213573'UTRnovel0.4
SARCchr6435214353'UTRnovel0.27
SKCMchr6435170815'UTRrs7481480680.62
SKCMchr643517128Missense_Mutationrs775143492V7M0.24
SKCMchr643519338SilentnovelF49F0.28
SKCMchr643521267SilentnovelF336F0.55
SKCMchr643517130SilentNAV7V0.28
SKCMchr643517131Missense_Mutationrs201071477E8K0.28
STADchr643520130Missense_MutationnovelN149K0.31
STADchr643520737Nonsense_MutationNAC256*0.28
STADchr643521001Missense_MutationNAK292M0.05
STADchr643520640Missense_MutationNAK224T0.11
STADchr643520331Missense_MutationnovelE187Q0.25
UCECchr643520164Missense_MutationNAE161K0.33
UCECchr643520083Nonsense_MutationnovelE134*0.34
UCECchr643520982Nonsense_MutationnovelE286*0.43
UCECchr643520169SilentnovelL162L0.36
UCECchr643519743Missense_Mutationrs780090128N96S0.2RNA_pol_A_bac
UCECchr643520344Missense_Mutationrs373046018R191Q0.24
UCECchr643520747Missense_MutationnovelG260C0.1
UCECchr643520400SilentnovelL210L0.3
UCECchr643521250Missense_MutationnovelG331R0.27
UCECchr643520074Nonsense_MutationnovelE131*0.52
UCECchr6435213963'UTRnovel0.57
UCECchr643520385Missense_MutationnovelG205C0.06
UCECchr643519424Missense_Mutationrs747204932R78Q0.27RNA_pol_A_bac
UCECchr643520766Missense_MutationnovelE266V0.27
UCECchr6435214523'UTRnovel0.31
UCECchr643519782Missense_Mutationrs796052127R109H0.48
UCECchr643520104Missense_Mutationrs148385032R141C0.21
UCECchr643521038SilentnovelD304D0.22
UCECchr643519733SilentnovelL93L0.34
UCECchr643519424Missense_Mutationrs747204932R78Q0.34RNA_pol_A_bac

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
COADAMP0.17520.005341
READAMP0.29090.02906

Survival Analysis
CancerP-value Q-value
KIRC0.00041

Kaplan-Meier Survival Analysis

STAD0.049

Kaplan-Meier Survival Analysis

SARC0.0016

Kaplan-Meier Survival Analysis

PRAD0.019

Kaplan-Meier Survival Analysis

LUSC0.04

Kaplan-Meier Survival Analysis

KICH0.0063

Kaplan-Meier Survival Analysis

LIHC0.0063

Kaplan-Meier Survival Analysis

DLBC0.0075

Kaplan-Meier Survival Analysis

OV0.021

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


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