EuRBPDB

Description

Ensembl ID: ENSG00000171467 (Gene tree)
Gene ID: 24149
Gene Symbol: ZNF318
Alias: HRIHFB2436|ZFP318
Full Name: zinc finger protein 318
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 62,345 bases
Position: chr6:43,307,134-43,369,478
Accession: 13578
RBP type: non-canonical RBP
Summary: (Zinc Finger Protein 318) is a Protein Coding gene. Among its related pathways are Androgen receptor signaling pathway. Gene Ontology (GO) annotations related to this gene include nucleic acid binding.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
24616512	Zinc-finger protein ZFP318 is essential for expression of IgD, the alternatively spliced Igh product made by mature B lymphocytes.	Proc Natl Acad Sci U S A	2014 Mar 25	Enders A	doi: 10.1073/pnas.1402739111

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000606599	ZNF318-203	525	-	ENSP00000475511	79 (aa)	-	U3KQ37
ENST00000607252	ZNF318-204	1185	-	-	- (aa)	-	-
ENST00000361428	ZNF318-201	8006	XM_011514451	ENSP00000354964	2279 (aa)	XP_011512753	Q5VUA4
ENST00000605935	ZNF318-202	3836	-	ENSP00000475748	1117 (aa)	-	Q5VUA4

Gene Model

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000171467	Blood Pressure	2E-16	26390057

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000171467	rs1563788	6	43340625	T	Systolic blood pressure	28739976	[0.21-0.52] unit increase	0.366	EFO_0006335
ENSG00000171467	rs1563788	6	43340625	T	Pulse pressure	28739976	[0.15-0.35] unit increase	0.253	EFO_0005763
ENSG00000171467	rs1563788	6	43340625	T	Systolic blood pressure	26390057	[0.39-0.63] mmHg increase	0.5113064	EFO_0006335
ENSG00000171467	rs10948071	6	43312975	?	Diastolic blood pressure (cigarette smoking interaction)	29455858			EFO_0006527\|EFO_0006336
ENSG00000171467	rs10948071	6	43312975	?	Systolic blood pressure (cigarette smoking interaction)	29455858			EFO_0006527\|EFO_0006335
ENSG00000171467	rs9394948	6	43367017	?	Serum uric acid levels	29403010	[0.022-0.04] unit decrease novel	0.03079	EFO_0004761
ENSG00000171467	rs77915916	6	43319984	A	Self-reported math ability	30038396	[0.018-0.032] unit decrease	0.0248	EFO_0004875
ENSG00000171467	rs10948071	6	43312975	C	Systolic blood pressure	27841878	unit increase	0.237	EFO_0006335
ENSG00000171467	rs1563788	6	43340625	C	Systolic blood pressure	27841878	unit decrease	0.258	EFO_0006335
ENSG00000171467	rs10948071	6	43312975	C	Pulse pressure	27841878	unit increase	0.121	EFO_0005763
ENSG00000171467	rs1563788	6	43340625	C	Pulse pressure	27841878	unit decrease	0.151	EFO_0005763
ENSG00000171467	rs4714677	6	43359301	?	Heel bone mineral density	30595370			EFO_0009270

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0042803	protein homodimerization activity	-	ISS	Function
GO:0045892	negative regulation of transcription, DNA-templated	-	ISS	Process
GO:0045893	positive regulation of transcription, DNA-templated	-	ISS	Process
GO:0051321	meiotic cell cycle	-	IEA	Process