EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000173145 (Gene tree)
Gene ID
64318
Gene Symbol
NOC3L
Alias
AD24|FLJ12820|FAD24|C10orf117
Full Name
NOC3 like DNA replication regulator
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
48,070 bases
Position
chr10:94,314,907-94,362,976
Accession
24034
RBP type
canonical RBP
Summary
(NOC3 Like DNA Replication Regulator) is a Protein Coding gene. Diseases associated with NOC3L include Nephrotic Syndrome, Type 3. Gene Ontology (GO) annotations related to this gene include binding.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000360412NOC3pPF07540.116e-2911
ENSP00000360412CBFPF03914.174.4e-2811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000371361NOC3L-2013455XM_017016544ENSP00000360412800 (aa)XP_016872033Q8WTT2
ENST00000461562NOC3L-202576--- (aa)--
ENST00000463649NOC3L-2032190--- (aa)--
Gene Model
Click here to download ENSG00000173145's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000173145Interleukin-65.32237584250327E-517903293
ENSG00000173145Interleukin-67.06755627223983E-517903293
ENSG00000173145Stroke2.0329085E-004-
ENSG00000173145Leukoaraiosis1.4532886E-005-
ENSG00000173145Leukoaraiosis1.8083199E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000173145rs764260331094350735ACommon carotid intima-media thickness in HIV negative individuals29206233[NR] unit increase0.03588EFO_0004860
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000173145's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000173145NOC3L9956.391ENSAPOG00000022983noc3l9956.892Acanthochromis_polyacanthus
ENSG00000173145NOC3L9991.990ENSAMEG00000013594NOC3L10091.000Ailuropoda_melanoleuca
ENSG00000173145NOC3L9957.377ENSACIG00000022699noc3l9856.873Amphilophus_citrinellus
ENSG00000173145NOC3L9962.469ENSAOCG00000016388noc3l9962.469Amphiprion_ocellaris
ENSG00000173145NOC3L9962.469ENSAPEG00000008785noc3l9963.648Amphiprion_percula
ENSG00000173145NOC3L9961.982ENSATEG00000015162noc3l9861.982Anabas_testudineus
ENSG00000173145NOC3L9977.136ENSAPLG00000012432NOC3L9977.136Anas_platyrhynchos
ENSG00000173145NOC3L9977.403ENSACAG00000007551NOC3L9976.875Anolis_carolinensis
ENSG00000173145NOC3L9996.617ENSANAG00000032361NOC3L9996.617Aotus_nancymaae
ENSG00000173145NOC3L9365.811ENSACLG00000015493noc3l9965.811Astatotilapia_calliptera
ENSG00000173145NOC3L9358.389ENSAMXG00000004967noc3l10057.852Astyanax_mexicanus
ENSG00000173145NOC3L9992.991ENSBTAG00000011368NOC3L10093.973Bos_taurus
ENSG00000173145NOC3L8633.473WBGene00016508C37H5.59133.152Caenorhabditis_elegans
ENSG00000173145NOC3L9996.101ENSCJAG00000015753NOC3L9996.101Callithrix_jacchus
ENSG00000173145NOC3L9993.492ENSCAFG00000008033NOC3L9992.616Canis_familiaris
ENSG00000173145NOC3L9993.617ENSCAFG00020004781NOC3L9992.741Canis_lupus_dingo
ENSG00000173145NOC3L9992.991ENSCHIG00000023968NOC3L9992.616Capra_hircus
ENSG00000173145NOC3L9991.615ENSTSYG00000005953NOC3L9991.615Carlito_syrichta
ENSG00000173145NOC3L9976.478ENSCAPG00000008220NOC3L9975.062Cavia_aperea
ENSG00000173145NOC3L9992.491ENSCPOG00000009746NOC3L9992.491Cavia_porcellus
ENSG00000173145NOC3L9196.694ENSCCAG00000021365NOC3L9996.694Cebus_capucinus
ENSG00000173145NOC3L10098.375ENSCATG00000035635NOC3L10098.375Cercocebus_atys
ENSG00000173145NOC3L9992.491ENSCLAG00000002911NOC3L9991.990Chinchilla_lanigera
ENSG00000173145NOC3L10098.625ENSCSAG00000006207NOC3L9998.625Chlorocebus_sabaeus
ENSG00000173145NOC3L6872.764ENSCHOG00000006410-6772.764Choloepus_hoffmanni
ENSG00000173145NOC3L9980.653ENSCPBG00000026538NOC3L9980.601Chrysemys_picta_bellii
ENSG00000173145NOC3L6342.188ENSCING00000013996-8742.188Ciona_intestinalis
ENSG00000173145NOC3L6443.925ENSCSAVG00000004323-9843.797Ciona_savignyi
ENSG00000173145NOC3L10099.000ENSCANG00000032546NOC3L9999.000Colobus_angolensis_palliatus
ENSG00000173145NOC3L9174.863ENSCGRG00001015486-10074.176Cricetulus_griseus_chok1gshd
ENSG00000173145NOC3L10091.011ENSCGRG00001009730-9990.262Cricetulus_griseus_chok1gshd
ENSG00000173145NOC3L9973.717ENSCGRG00000013159-10073.091Cricetulus_griseus_crigri
ENSG00000173145NOC3L10091.011ENSCGRG00000006291Noc3l10090.262Cricetulus_griseus_crigri
ENSG00000173145NOC3L9465.293ENSCSEG00000001257noc3l9765.426Cynoglossus_semilaevis
ENSG00000173145NOC3L8453.333ENSCVAG00000000764noc3l8954.351Cyprinodon_variegatus
ENSG00000173145NOC3L9967.591ENSDARG00000002487noc3l9967.509Danio_rerio
ENSG00000173145NOC3L9988.750ENSDNOG00000016992NOC3L10088.639Dasypus_novemcinctus
ENSG00000173145NOC3L10092.135ENSDORG00000011806Noc3l10091.511Dipodomys_ordii
ENSG00000173145NOC3L8635.319FBgn0037489CG12347038.225Drosophila_melanogaster
ENSG00000173145NOC3L6973.267ENSETEG00000016152-7673.267Echinops_telfairi
ENSG00000173145NOC3L9448.244ENSEBUG00000008654noc3l9848.105Eptatretus_burgeri
ENSG00000173145NOC3L9993.617ENSEASG00005011488NOC3L9894.195Equus_asinus_asinus
ENSG00000173145NOC3L9993.742ENSECAG00000021720NOC3L9992.991Equus_caballus
ENSG00000173145NOC3L7670.244ENSEEUG00000003411-8970.244Erinaceus_europaeus
ENSG00000173145NOC3L9967.372ENSELUG00000004023noc3l9966.792Esox_lucius
ENSG00000173145NOC3L9993.116ENSFCAG00000006261NOC3L9992.866Felis_catus
ENSG00000173145NOC3L9976.942ENSFALG00000007807NOC3L9976.692Ficedula_albicollis
ENSG00000173145NOC3L10092.260ENSFDAG00000009386NOC3L10092.260Fukomys_damarensis
ENSG00000173145NOC3L9961.153ENSFHEG00000003448noc3l9862.334Fundulus_heteroclitus
ENSG00000173145NOC3L9366.088ENSGMOG00000007458noc3l9965.344Gadus_morhua
ENSG00000173145NOC3L9977.569ENSGALG00000035667NOC3L9477.569Gallus_gallus
ENSG00000173145NOC3L9462.317ENSGAFG00000001525noc3l10062.317Gambusia_affinis
ENSG00000173145NOC3L9960.936ENSGACG00000010335noc3l9861.062Gasterosteus_aculeatus
ENSG00000173145NOC3L9979.850ENSGAGG00000020146NOC3L9979.850Gopherus_agassizii
ENSG00000173145NOC3L9187.758ENSGGOG00000014038NOC3L10087.758Gorilla_gorilla
ENSG00000173145NOC3L9559.868ENSHBUG00000019428noc3l9961.447Haplochromis_burtoni
ENSG00000173145NOC3L9988.235ENSHGLG00000013197NOC3L10088.125Heterocephalus_glaber_female
ENSG00000173145NOC3L9988.080ENSHGLG00100002424NOC3L9987.970Heterocephalus_glaber_male
ENSG00000173145NOC3L9958.093ENSHCOG00000004797noc3l9957.358Hippocampus_comes
ENSG00000173145NOC3L9068.465ENSIPUG00000011208noc3l9868.188Ictalurus_punctatus
ENSG00000173145NOC3L9993.367ENSSTOG00000027599NOC3L9993.116Ictidomys_tridecemlineatus
ENSG00000173145NOC3L9991.364ENSJJAG00000018611Noc3l9991.364Jaculus_jaculus
ENSG00000173145NOC3L9962.344ENSKMAG00000015270noc3l9763.286Kryptolebias_marmoratus
ENSG00000173145NOC3L9962.817ENSLBEG00000020287noc3l10062.142Labrus_bergylta
ENSG00000173145NOC3L9974.185ENSLACG00000017685NOC3L9974.311Latimeria_chalumnae
ENSG00000173145NOC3L9971.016ENSLOCG00000005949noc3l9971.016Lepisosteus_oculatus
ENSG00000173145NOC3L9993.009ENSLAFG00000001715NOC3L9993.009Loxodonta_africana
ENSG00000173145NOC3L10098.500ENSMFAG00000032429NOC3L10098.500Macaca_fascicularis
ENSG00000173145NOC3L10098.375ENSMMUG00000001619NOC3L10098.375Macaca_mulatta
ENSG00000173145NOC3L10098.125ENSMNEG00000027484NOC3L10098.125Macaca_nemestrina
ENSG00000173145NOC3L10098.500ENSMLEG00000028319NOC3L10098.500Mandrillus_leucophaeus
ENSG00000173145NOC3L9962.017ENSMAMG00000010850noc3l9963.482Mastacembelus_armatus
ENSG00000173145NOC3L9963.000ENSMZEG00005018478noc3l9963.000Maylandia_zebra
ENSG00000173145NOC3L9978.043ENSMGAG00000008676NOC3L9978.043Meleagris_gallopavo
ENSG00000173145NOC3L7692.270ENSMAUG00000021858Noc3l8792.371Mesocricetus_auratus
ENSG00000173145NOC3L10094.125ENSMICG00000005560NOC3L10094.125Microcebus_murinus
ENSG00000173145NOC3L9991.125ENSMOCG00000012818Noc3l9990.500Microtus_ochrogaster
ENSG00000173145NOC3L9465.246ENSMMOG00000009245noc3l9765.246Mola_mola
ENSG00000173145NOC3L9983.333ENSMODG00000005664NOC3L9983.208Monodelphis_domestica
ENSG00000173145NOC3L9962.422ENSMALG00000011772noc3l9962.297Monopterus_albus
ENSG00000173145NOC3L9990.351MGP_CAROLIEiJ_G0022928Noc3l9989.724Mus_caroli
ENSG00000173145NOC3L9990.351ENSMUSG00000024999Noc3l9989.724Mus_musculus
ENSG00000173145NOC3L9990.977MGP_PahariEiJ_G0014421Noc3l9990.351Mus_pahari
ENSG00000173145NOC3L9990.727MGP_SPRETEiJ_G0023846Noc3l9989.975Mus_spretus
ENSG00000173145NOC3L9991.615ENSMPUG00000017135NOC3L9991.865Mustela_putorius_furo
ENSG00000173145NOC3L9989.084ENSNGAG00000018086Noc3l9989.210Nannospalax_galili
ENSG00000173145NOC3L8562.807ENSNBRG00000024182noc3l9765.299Neolamprologus_brichardi
ENSG00000173145NOC3L10095.019ENSNLEG00000012959NOC3L10095.019Nomascus_leucogenys
ENSG00000173145NOC3L5689.211ENSMEUG00000010545-7790.323Notamacropus_eugenii
ENSG00000173145NOC3L7690.698ENSOPRG00000013292NOC3L7690.698Ochotona_princeps
ENSG00000173145NOC3L9991.511ENSODEG00000015822NOC3L9991.386Octodon_degus
ENSG00000173145NOC3L9962.846ENSONIG00000019138noc3l9862.594Oreochromis_niloticus
ENSG00000173145NOC3L6077.987ENSOANG00000004468-9778.834Ornithorhynchus_anatinus
ENSG00000173145NOC3L9992.240ENSOCUG00000013930NOC3L9891.740Oryctolagus_cuniculus
ENSG00000173145NOC3L9961.834ENSORLG00000019410noc3l9961.710Oryzias_latipes
ENSG00000173145NOC3L9760.692ENSORLG00020009199noc3l9959.618Oryzias_latipes_hni
ENSG00000173145NOC3L9760.497ENSORLG00015008623noc3l9960.024Oryzias_latipes_hsok
ENSG00000173145NOC3L10061.501ENSOMEG00000015213noc3l10061.255Oryzias_melastigma
ENSG00000173145NOC3L10094.257ENSOGAG00000009003NOC3L9994.257Otolemur_garnettii
ENSG00000173145NOC3L9992.991ENSOARG00000003978NOC3L9992.616Ovis_aries
ENSG00000173145NOC3L10099.750ENSPPAG00000043755NOC3L10099.750Pan_paniscus
ENSG00000173145NOC3L10093.500ENSPPRG00000006434NOC3L9992.625Panthera_pardus
ENSG00000173145NOC3L10093.500ENSPTIG00000019032NOC3L9992.625Panthera_tigris_altaica
ENSG00000173145NOC3L10099.625ENSPTRG00000002776NOC3L10099.625Pan_troglodytes
ENSG00000173145NOC3L10098.250ENSPANG00000021522NOC3L10098.250Papio_anubis
ENSG00000173145NOC3L9966.045ENSPKIG00000005812noc3l9968.270Paramormyrops_kingsleyae
ENSG00000173145NOC3L9978.527ENSPSIG00000004654NOC3L9980.254Pelodiscus_sinensis
ENSG00000173145NOC3L9457.600ENSPMGG00000003721noc3l9557.467Periophthalmus_magnuspinnatus
ENSG00000173145NOC3L9988.486ENSPEMG00000013021Noc3l9987.860Peromyscus_maniculatus_bairdii
ENSG00000173145NOC3L9984.442ENSPCIG00000013354NOC3L9984.316Phascolarctos_cinereus
ENSG00000173145NOC3L9961.965ENSPFOG00000000761noc3l9961.839Poecilia_formosa
ENSG00000173145NOC3L9962.217ENSPLAG00000013702noc3l9962.091Poecilia_latipinna
ENSG00000173145NOC3L9962.091ENSPMEG00000007562noc3l9961.965Poecilia_mexicana
ENSG00000173145NOC3L9961.742ENSPREG00000001462noc3l9961.132Poecilia_reticulata
ENSG00000173145NOC3L10098.500ENSPPYG00000002500NOC3L10098.500Pongo_abelii
ENSG00000173145NOC3L8490.055ENSPCAG00000000509NOC3L10079.424Procavia_capensis
ENSG00000173145NOC3L10079.750ENSPCOG00000018871NOC3L7788.112Propithecus_coquereli
ENSG00000173145NOC3L9985.857ENSPVAG00000014290NOC3L9192.126Pteropus_vampyrus
ENSG00000173145NOC3L8162.769ENSPNYG00000017102noc3l9262.805Pundamilia_nyererei
ENSG00000173145NOC3L9966.458ENSPNAG00000012908noc3l9966.793Pygocentrus_nattereri
ENSG00000173145NOC3L9990.727ENSRNOG00000013965Noc3l9990.727Rattus_norvegicus
ENSG00000173145NOC3L10099.000ENSRBIG00000039925NOC3L9999.000Rhinopithecus_bieti
ENSG00000173145NOC3L10099.000ENSRROG00000028950NOC3L9999.000Rhinopithecus_roxellana
ENSG00000173145NOC3L6430.561YLR002C-7830.684Saccharomyces_cerevisiae
ENSG00000173145NOC3L9996.491ENSSBOG00000030095NOC3L9996.491Saimiri_boliviensis_boliviensis
ENSG00000173145NOC3L9984.606ENSSHAG00000015050NOC3L9984.606Sarcophilus_harrisii
ENSG00000173145NOC3L9969.347ENSSFOG00015012840noc3l9969.308Scleropages_formosus
ENSG00000173145NOC3L9960.300ENSSMAG00000013795noc3l9960.804Scophthalmus_maximus
ENSG00000173145NOC3L10062.655ENSSDUG00000014905noc3l10062.159Seriola_dumerili
ENSG00000173145NOC3L9957.449ENSSLDG00000021439noc3l9957.576Seriola_lalandi_dorsalis
ENSG00000173145NOC3L8691.942ENSSARG00000008382NOC3L8691.753Sorex_araneus
ENSG00000173145NOC3L9581.759ENSSPUG00000003210NOC3L9981.365Sphenodon_punctatus
ENSG00000173145NOC3L9994.236ENSSSCG00000010484NOC3L9994.350Sus_scrofa
ENSG00000173145NOC3L9976.478ENSTGUG00000008590NOC3L9976.478Taeniopygia_guttata
ENSG00000173145NOC3L6160.082ENSTRUG00000003582noc3l9960.082Takifugu_rubripes
ENSG00000173145NOC3L9959.227ENSTNIG00000018542noc3l9959.726Tetraodon_nigroviridis
ENSG00000173145NOC3L9093.966ENSTBEG00000009416NOC3L9093.966Tupaia_belangeri
ENSG00000173145NOC3L9987.484ENSTTRG00000013253NOC3L9987.484Tursiops_truncatus
ENSG00000173145NOC3L9992.240ENSUAMG00000009528NOC3L10091.250Ursus_americanus
ENSG00000173145NOC3L9992.365ENSUMAG00000004328NOC3L10091.375Ursus_maritimus
ENSG00000173145NOC3L9993.867ENSVPAG00000010113NOC3L9993.617Vicugna_pacos
ENSG00000173145NOC3L9993.742ENSVVUG00000022580NOC3L9895.585Vulpes_vulpes
ENSG00000173145NOC3L9969.173ENSXETG00000020975noc3l9968.922Xenopus_tropicalis
ENSG00000173145NOC3L8159.545ENSXCOG00000017874noc3l9559.846Xiphophorus_couchianus
ENSG00000173145NOC3L9961.965ENSXMAG00000015545noc3l9961.713Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003682chromatin binding21873635.IBAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-IDAComponent
GO:0005730nucleolus-IDAComponent
GO:0005739mitochondrion-IDAComponent
GO:0016607nuclear speck-IEAComponent
GO:0045444fat cell differentiation-IEAProcess

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