EuRBPDB

Description

Ensembl ID: ENSG00000175718 (Gene tree)
Gene ID: 139804
Gene Symbol: RBMXL3
Alias: FLJ40249|CXorf55
Full Name: RBMX like 3
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 3,469 bases
Position: chrX:115,189,400-115,192,868
Accession: 26859
RBP type: canonical RBP
Summary: (RBMX Like 3) is a Protein Coding gene. Among its related pathways are mRNA Splicing - Major Pathway. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is RBMXL2.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000417451	RRM_1	PF00076.22	8.4e-20	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000424776	RBMXL3-201	3442	-	ENSP00000417451	1067 (aa)	-	Q8N7X1

Gene Model

Pathways

Pathway ID	Pathway Name	Source
hsa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000175718	RBMXL3	100	63.089	ENSCANG00000038625	-	100	59.854	Colobus_angolensis_palliatus
ENSG00000175718	RBMXL3	100	92.135	ENSGGOG00000027260	RBMXL3	100	92.135	Gorilla_gorilla
ENSG00000175718	RBMXL3	100	65.351	ENSMFAG00000017591	-	100	64.431	Macaca_fascicularis
ENSG00000175718	RBMXL3	100	62.148	ENSMNEG00000026102	-	100	57.290	Macaca_nemestrina
ENSG00000175718	RBMXL3	100	68.336	ENSNLEG00000028889	-	100	66.947	Nomascus_leucogenys
ENSG00000175718	RBMXL3	100	81.011	ENSPPAG00000030663	-	100	74.725	Pan_paniscus
ENSG00000175718	RBMXL3	100	93.071	ENSPTRG00000028217	RBMXL3	100	93.071	Pan_troglodytes
ENSG00000175718	RBMXL3	98	63.866	ENSPANG00000017967	-	100	64.535	Papio_anubis
ENSG00000175718	RBMXL3	100	61.840	ENSRROG00000035554	-	100	61.494	Rhinopithecus_roxellana

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003729	mRNA binding	21873635.	IBA	Function