EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000178605 (Gene tree)
Gene ID: 8225
Gene Symbol: GTPBP6
Alias: PGPL|FLJ20977
Full Name: GTP binding protein 6 (putative)
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 15,463 bases
Position: chrX:303,357-318,819
Accession: 30189
RBP type: canonical RBP
Summary: This gene encodes a GTP binding protein and is located in the pseudoautosomal region (PAR) at the end of the short arms of the X and Y chromosomes. [provided by RefSeq, Nov 2011]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000316598	MMR_HSR1	PF01926.23	4.2e-13	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000485332	GTPBP6-202	2016	-	-	- (aa)	-	-
ENST00000326153	GTPBP6-201	1907	XM_006724447	ENSP00000316598	516 (aa)	XP_006724510	O43824

Gene Model

Click here to download ENSG00000178605's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000178605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000178605	GTPBP6	84	63.864	ENSAPOG00000001396	gtpbp6	79	65.094	Acanthochromis_polyacanthus
ENSG00000178605	GTPBP6	93	77.479	ENSAMEG00000001958	GTPBP6	100	76.653	Ailuropoda_melanoleuca
ENSG00000178605	GTPBP6	84	57.500	ENSACIG00000001694	gtpbp6	78	58.894	Amphilophus_citrinellus
ENSG00000178605	GTPBP6	84	63.182	ENSAOCG00000014817	gtpbp6	79	64.387	Amphiprion_ocellaris
ENSG00000178605	GTPBP6	84	63.182	ENSAPEG00000017894	gtpbp6	79	64.387	Amphiprion_percula
ENSG00000178605	GTPBP6	96	55.146	ENSATEG00000012768	gtpbp6	97	55.945	Anabas_testudineus
ENSG00000178605	GTPBP6	78	69.630	ENSAPLG00000005592	GTPBP6	99	69.630	Anas_platyrhynchos
ENSG00000178605	GTPBP6	99	63.636	ENSACAG00000011834	GTPBP6	98	63.636	Anolis_carolinensis
ENSG00000178605	GTPBP6	88	61.171	ENSACLG00000002216	gtpbp6	80	62.937	Astatotilapia_calliptera
ENSG00000178605	GTPBP6	94	56.539	ENSAMXG00000012493	gtpbp6	84	63.246	Astyanax_mexicanus
ENSG00000178605	GTPBP6	100	74.808	ENSBTAG00000054315	GTPBP6	100	75.385	Bos_taurus
ENSG00000178605	GTPBP6	68	91.808	ENSCJAG00000013056	GTPBP6	100	91.808	Callithrix_jacchus
ENSG00000178605	GTPBP6	99	72.762	ENSCAFG00000010931	GTPBP6	99	74.242	Canis_familiaris
ENSG00000178605	GTPBP6	99	72.571	ENSCAFG00020001279	-	99	74.053	Canis_lupus_dingo
ENSG00000178605	GTPBP6	99	72.571	ENSCAFG00020010766	-	99	74.053	Canis_lupus_dingo
ENSG00000178605	GTPBP6	100	73.410	ENSCHIG00000000121	GTPBP6	100	75.192	Capra_hircus
ENSG00000178605	GTPBP6	100	88.975	ENSCCAG00000032874	GTPBP6	100	88.975	Cebus_capucinus
ENSG00000178605	GTPBP6	100	93.217	ENSCATG00000024945	GTPBP6	100	93.217	Cercocebus_atys
ENSG00000178605	GTPBP6	62	75.357	ENSCLAG00000000054	-	100	75.357	Chinchilla_lanigera
ENSG00000178605	GTPBP6	50	93.846	ENSCSAG00000018371	-	100	93.846	Chlorocebus_sabaeus
ENSG00000178605	GTPBP6	82	69.484	ENSCPBG00000007520	GTPBP6	82	69.484	Chrysemys_picta_bellii
ENSG00000178605	GTPBP6	78	39.851	ENSCING00000012867	-	78	39.851	Ciona_intestinalis
ENSG00000178605	GTPBP6	70	37.845	ENSCSAVG00000009232	-	92	37.845	Ciona_savignyi
ENSG00000178605	GTPBP6	100	67.505	ENSCGRG00001022411	Gtpbp6	99	67.311	Cricetulus_griseus_chok1gshd
ENSG00000178605	GTPBP6	77	76.574	ENSCGRG00000007715	Gtpbp6	92	76.574	Cricetulus_griseus_crigri
ENSG00000178605	GTPBP6	88	57.609	ENSCSEG00000007271	gtpbp6	83	59.242	Cynoglossus_semilaevis
ENSG00000178605	GTPBP6	83	63.700	ENSCVAG00000015417	gtpbp6	83	63.700	Cyprinodon_variegatus
ENSG00000178605	GTPBP6	96	57.831	ENSDARG00000061091	gtpbp6	79	62.877	Danio_rerio
ENSG00000178605	GTPBP6	82	61.765	ENSDNOG00000039508	GTPBP6	100	63.801	Dasypus_novemcinctus
ENSG00000178605	GTPBP6	92	37.854	FBgn0039339	CG5116	82	39.817	Drosophila_melanogaster
ENSG00000178605	GTPBP6	91	46.875	ENSEBUG00000000404	gtpbp6	78	49.192	Eptatretus_burgeri
ENSG00000178605	GTPBP6	92	75.000	ENSEASG00005007092	-	68	77.226	Equus_asinus_asinus
ENSG00000178605	GTPBP6	99	76.505	ENSECAG00000032734	GTPBP6	99	76.686	Equus_caballus
ENSG00000178605	GTPBP6	80	64.320	ENSELUG00000016376	gtpbp6	74	64.320	Esox_lucius
ENSG00000178605	GTPBP6	99	69.126	ENSFCAG00000010310	-	98	76.639	Felis_catus
ENSG00000178605	GTPBP6	99	68.522	ENSFCAG00000013263	-	100	68.522	Felis_catus
ENSG00000178605	GTPBP6	83	65.661	ENSFALG00000004133	GTPBP6	99	63.617	Ficedula_albicollis
ENSG00000178605	GTPBP6	88	61.171	ENSFHEG00000012018	gtpbp6	82	63.915	Fundulus_heteroclitus
ENSG00000178605	GTPBP6	78	63.184	ENSGMOG00000004778	gtpbp6	99	63.184	Gadus_morhua
ENSG00000178605	GTPBP6	77	70.854	ENSGALG00000016717	GTPBP6	99	70.854	Gallus_gallus
ENSG00000178605	GTPBP6	82	64.218	ENSGAFG00000018158	gtpbp6	74	64.218	Gambusia_affinis
ENSG00000178605	GTPBP6	78	63.027	ENSGACG00000013857	gtpbp6	99	63.027	Gasterosteus_aculeatus
ENSG00000178605	GTPBP6	82	69.340	ENSGAGG00000021606	GTPBP6	81	69.340	Gopherus_agassizii
ENSG00000178605	GTPBP6	55	100.000	ENSGGOG00000002792	-	100	100.000	Gorilla_gorilla
ENSG00000178605	GTPBP6	88	61.171	ENSHBUG00000013113	gtpbp6	79	63.507	Haplochromis_burtoni
ENSG00000178605	GTPBP6	99	72.093	ENSHGLG00000000207	GTPBP6	99	72.093	Heterocephalus_glaber_female
ENSG00000178605	GTPBP6	69	75.766	ENSHGLG00100000320	GTPBP6	100	75.766	Heterocephalus_glaber_male
ENSG00000178605	GTPBP6	82	47.294	ENSHCOG00000012544	gtpbp6	91	60.000	Hippocampus_comes
ENSG00000178605	GTPBP6	82	62.850	ENSIPUG00000022531	gtpbp6	79	62.850	Ictalurus_punctatus
ENSG00000178605	GTPBP6	85	58.277	ENSKMAG00000016464	gtpbp6	82	59.441	Kryptolebias_marmoratus
ENSG00000178605	GTPBP6	82	63.033	ENSLBEG00000024203	gtpbp6	80	63.033	Labrus_bergylta
ENSG00000178605	GTPBP6	85	68.636	ENSLACG00000012754	GTPBP6	77	70.023	Latimeria_chalumnae
ENSG00000178605	GTPBP6	89	61.638	ENSLOCG00000008009	gtpbp6	88	65.796	Lepisosteus_oculatus
ENSG00000178605	GTPBP6	100	93.605	ENSMFAG00000041568	GTPBP6	100	93.605	Macaca_fascicularis
ENSG00000178605	GTPBP6	100	81.977	ENSMNEG00000039609	GTPBP6	100	81.977	Macaca_nemestrina
ENSG00000178605	GTPBP6	84	62.045	ENSMAMG00000012631	gtpbp6	80	63.208	Mastacembelus_armatus
ENSG00000178605	GTPBP6	88	60.954	ENSMZEG00005002869	gtpbp6	80	62.704	Maylandia_zebra
ENSG00000178605	GTPBP6	73	67.624	ENSMGAG00000014752	GTPBP6	95	67.624	Meleagris_gallopavo
ENSG00000178605	GTPBP6	90	59.539	ENSMMOG00000005950	gtpbp6	81	62.736	Mola_mola
ENSG00000178605	GTPBP6	82	75.650	ENSMODG00000000326	GTPBP6	92	75.520	Monodelphis_domestica
ENSG00000178605	GTPBP6	82	62.264	ENSMALG00000014993	gtpbp6	80	62.264	Monopterus_albus
ENSG00000178605	GTPBP6	81	66.508	MGP_CAROLIEiJ_G0027536	Gtpbp6	98	61.583	Mus_caroli
ENSG00000178605	GTPBP6	82	67.536	ENSMUSG00000033434	Gtpbp6	98	62.162	Mus_musculus
ENSG00000178605	GTPBP6	82	66.825	MGP_SPRETEiJ_G0028534	Gtpbp6	98	61.583	Mus_spretus
ENSG00000178605	GTPBP6	77	81.250	ENSMPUG00000001536	GTPBP6	86	81.250	Mustela_putorius_furo
ENSG00000178605	GTPBP6	99	69.750	ENSNGAG00000011609	Gtpbp6	99	69.674	Nannospalax_galili
ENSG00000178605	GTPBP6	95	58.300	ENSNBRG00000017629	gtpbp6	79	63.981	Neolamprologus_brichardi
ENSG00000178605	GTPBP6	73	69.761	ENSMEUG00000001355	-	100	69.761	Notamacropus_eugenii
ENSG00000178605	GTPBP6	99	67.573	ENSODEG00000001052	GTPBP6	100	67.505	Octodon_degus
ENSG00000178605	GTPBP6	89	60.475	ENSONIG00000007330	gtpbp6	80	63.507	Oreochromis_niloticus
ENSG00000178605	GTPBP6	89	62.017	ENSOANG00000007007	-	96	63.946	Ornithorhynchus_anatinus
ENSG00000178605	GTPBP6	99	71.760	ENSOCUG00000008245	GTPBP6	99	72.147	Oryctolagus_cuniculus
ENSG00000178605	GTPBP6	87	60.841	ENSORLG00000016077	gtpbp6	82	63.084	Oryzias_latipes
ENSG00000178605	GTPBP6	87	60.841	ENSORLG00020018687	gtpbp6	82	63.084	Oryzias_latipes_hni
ENSG00000178605	GTPBP6	87	60.398	ENSORLG00015014255	gtpbp6	82	62.617	Oryzias_latipes_hsok
ENSG00000178605	GTPBP6	96	56.886	ENSOMEG00000004496	gtpbp6	82	63.318	Oryzias_melastigma
ENSG00000178605	GTPBP6	84	82.679	ENSOGAG00000011327	GTPBP6	97	82.679	Otolemur_garnettii
ENSG00000178605	GTPBP6	78	74.265	ENSOARG00000000946	GTPBP6	98	74.510	Ovis_aries
ENSG00000178605	GTPBP6	72	95.989	ENSPPAG00000028400	-	83	95.989	Pan_paniscus
ENSG00000178605	GTPBP6	98	68.959	ENSPPRG00000004932	-	100	68.959	Panthera_pardus
ENSG00000178605	GTPBP6	99	62.715	ENSPPRG00000006710	-	99	62.906	Panthera_pardus
ENSG00000178605	GTPBP6	100	99.225	ENSPTRG00000050696	GTPBP6	100	99.225	Pan_troglodytes
ENSG00000178605	GTPBP6	100	90.504	ENSPANG00000011580	GTPBP6	100	90.504	Papio_anubis
ENSG00000178605	GTPBP6	87	63.193	ENSPKIG00000022514	gtpbp6	76	65.012	Paramormyrops_kingsleyae
ENSG00000178605	GTPBP6	78	70.720	ENSPSIG00000013117	GTPBP6	99	70.720	Pelodiscus_sinensis
ENSG00000178605	GTPBP6	77	51.880	ENSPMAG00000006496	gtpbp6	99	51.880	Petromyzon_marinus
ENSG00000178605	GTPBP6	99	68.462	ENSPCIG00000016456	GTPBP6	99	68.846	Phascolarctos_cinereus
ENSG00000178605	GTPBP6	82	64.218	ENSPFOG00000015695	gtpbp6	99	65.063	Poecilia_formosa
ENSG00000178605	GTPBP6	82	64.218	ENSPLAG00000015495	gtpbp6	81	64.218	Poecilia_latipinna
ENSG00000178605	GTPBP6	82	64.218	ENSPMEG00000000859	gtpbp6	81	64.218	Poecilia_mexicana
ENSG00000178605	GTPBP6	82	64.929	ENSPREG00000017643	gtpbp6	81	64.929	Poecilia_reticulata
ENSG00000178605	GTPBP6	53	98.545	ENSPPYG00000020075	-	100	98.545	Pongo_abelii
ENSG00000178605	GTPBP6	72	86.256	ENSPCOG00000014096	GTPBP6	76	86.256	Propithecus_coquereli
ENSG00000178605	GTPBP6	88	61.171	ENSPNYG00000000521	gtpbp6	78	63.507	Pundamilia_nyererei
ENSG00000178605	GTPBP6	88	61.002	ENSPNAG00000002094	gtpbp6	78	62.704	Pygocentrus_nattereri
ENSG00000178605	GTPBP6	83	66.355	ENSRNOG00000037426	Gtpbp6	97	60.624	Rattus_norvegicus
ENSG00000178605	GTPBP6	83	66.355	ENSRNOG00000048168	Gtpbp6	97	60.624	Rattus_norvegicus
ENSG00000178605	GTPBP6	100	92.442	ENSRBIG00000027538	GTPBP6	100	92.442	Rhinopithecus_bieti
ENSG00000178605	GTPBP6	100	92.054	ENSRROG00000033503	GTPBP6	100	92.054	Rhinopithecus_roxellana
ENSG00000178605	GTPBP6	99	69.615	ENSSHAG00000015570	GTPBP6	99	69.615	Sarcophilus_harrisii
ENSG00000178605	GTPBP6	87	64.680	ENSSFOG00015004098	gtpbp6	75	67.619	Scleropages_formosus
ENSG00000178605	GTPBP6	83	62.998	ENSSMAG00000019520	gtpbp6	80	62.998	Scophthalmus_maximus
ENSG00000178605	GTPBP6	95	57.809	ENSSDUG00000002202	gtpbp6	79	63.232	Seriola_dumerili
ENSG00000178605	GTPBP6	88	60.173	ENSSLDG00000023633	gtpbp6	89	62.295	Seriola_lalandi_dorsalis
ENSG00000178605	GTPBP6	95	63.434	ENSSPUG00000005537	GTPBP6	94	63.030	Sphenodon_punctatus
ENSG00000178605	GTPBP6	84	62.329	ENSSPAG00000017406	gtpbp6	78	63.507	Stegastes_partitus
ENSG00000178605	GTPBP6	55	63.986	ENSSPAG00000017331	gtpbp6	95	63.986	Stegastes_partitus
ENSG00000178605	GTPBP6	99	75.479	ENSSSCG00000033858	-	100	76.690	Sus_scrofa
ENSG00000178605	GTPBP6	99	75.479	ENSSSCG00000037491	-	99	76.493	Sus_scrofa
ENSG00000178605	GTPBP6	85	65.237	ENSTGUG00000010642	-	97	65.367	Taeniopygia_guttata
ENSG00000178605	GTPBP6	85	61.451	ENSTRUG00000011175	gtpbp6	82	63.270	Takifugu_rubripes
ENSG00000178605	GTPBP6	84	61.503	ENSTNIG00000010659	gtpbp6	98	62.470	Tetraodon_nigroviridis
ENSG00000178605	GTPBP6	78	82.134	ENSUMAG00000018848	GTPBP6	99	82.134	Ursus_maritimus
ENSG00000178605	GTPBP6	81	77.435	ENSVVUG00000008199	GTPBP6	76	75.799	Vulpes_vulpes
ENSG00000178605	GTPBP6	82	67.059	ENSXETG00000004125	gtpbp6	80	67.059	Xenopus_tropicalis
ENSG00000178605	GTPBP6	55	68.198	ENSXCOG00000006281	gtpbp6	57	68.198	Xiphophorus_couchianus
ENSG00000178605	GTPBP6	82	64.455	ENSXMAG00000015980	gtpbp6	81	64.455	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function