EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000182117 (Gene tree)
Gene ID
55505
Gene Symbol
NOP10
Alias
NOP10P|MGC70651|NOLA3
Full Name
NOP10 ribonucleoprotein
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
1,465 bases
Position
chr15:34,341,713-34,343,177
Accession
14378
RBP type
canonical RBP
Summary
This gene is a member of the H/ACA snoRNPs (small nucleolar ribonucleoproteins) gene family. snoRNPs are involved in various aspects of rRNA processing and modification and have been classified into two families: C/D and H/ACA. The H/ACA snoRNPs also include the DKC1, NOLA1 and NOLA2 proteins. These four H/ACA snoRNP proteins localize to the dense fibrillar components of nucleoli and to coiled (Cajal) bodies in the nucleus. Both 18S rRNA production and rRNA pseudouridylation are impaired if any one of the four proteins is depleted. The four H/ACA snoRNP proteins are also components of the telomerase complex. This gene encodes a protein related to Saccharomyces cerevisiae Nop10p. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000332198Nop10pPF04135.129.3e-2311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
21708174Structure of H/ACA RNP protein Nhp2p reveals cis/trans isomerization of a conserved proline at the RNA and Nop10 binding interface.J Mol Biol2011 Sep 2Koo BKdoi: 10.1016/j.jmb.2011.06.022
22117216Structure of the Shq1-Cbf5-Nop10-Gar1 complex and implications for H/ACA RNP biogenesis and dyskeratosis congenita.EMBO J2011 Nov 25Li Sdoi: 10.1038/emboj.2011.427.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000557912NOP10-202436-ENSP0000045347536 (aa)-H0YM60
ENST00000328848NOP10-201554-ENSP0000033219864 (aa)-Q9NPE3
Gene Model
Click here to download ENSG00000182117's gene model file
Pathways
Pathway IDPathway NameSource
hsa03008Ribosome biogenesis in eukaryotesKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000182117's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000182117NOP1010079.688ENSAPOG00000020605nop1010079.688Acanthochromis_polyacanthus
ENSG00000182117NOP1010096.875ENSAMEG00000004096NOP1010096.875Ailuropoda_melanoleuca
ENSG00000182117NOP1010078.125ENSACIG00000009438nop1010078.125Amphilophus_citrinellus
ENSG00000182117NOP1010079.688ENSAOCG00000017153nop1010079.688Amphiprion_ocellaris
ENSG00000182117NOP1010079.688ENSAPEG00000016945nop1010079.688Amphiprion_percula
ENSG00000182117NOP1010078.125ENSATEG00000012665nop1010078.125Anabas_testudineus
ENSG00000182117NOP1010085.938ENSACAG00000024255NOP1010085.938Anolis_carolinensis
ENSG00000182117NOP1010098.438ENSANAG00000027375-10098.438Aotus_nancymaae
ENSG00000182117NOP1010098.438ENSANAG00000031158-10098.438Aotus_nancymaae
ENSG00000182117NOP1010075.000ENSACLG00000023431nop1010075.000Astatotilapia_calliptera
ENSG00000182117NOP1010081.250ENSAMXG00000043156nop1010081.250Astyanax_mexicanus
ENSG00000182117NOP1010095.312ENSBTAG00000025632NOP1010095.312Bos_taurus
ENSG00000182117NOP109860.317WBGene00007708nola-39860.317Caenorhabditis_elegans
ENSG00000182117NOP1010096.875ENSCJAG00000044339-10096.875Callithrix_jacchus
ENSG00000182117NOP1010098.438ENSCJAG00000040128-10098.438Callithrix_jacchus
ENSG00000182117NOP1010098.438ENSCJAG00000045504-10098.438Callithrix_jacchus
ENSG00000182117NOP1010095.312ENSCJAG00000039771-10095.312Callithrix_jacchus
ENSG00000182117NOP1010096.875ENSCAFG00000031420NOP1010096.875Canis_familiaris
ENSG00000182117NOP1010096.875ENSCAFG00020009619NOP1010096.875Canis_lupus_dingo
ENSG00000182117NOP1010096.875ENSCHIG00000011845NOP1010096.875Capra_hircus
ENSG00000182117NOP1010095.312ENSTSYG00000028364NOP1010095.312Carlito_syrichta
ENSG00000182117NOP1010098.438ENSCPOG00000037400NOP1010098.438Cavia_porcellus
ENSG00000182117NOP1010096.875ENSCCAG00000018650-10096.875Cebus_capucinus
ENSG00000182117NOP1010098.438ENSCCAG00000004085-10098.438Cebus_capucinus
ENSG00000182117NOP1010095.312ENSCCAG00000018649-10095.312Cebus_capucinus
ENSG00000182117NOP1010098.438ENSCCAG00000035338-10098.438Cebus_capucinus
ENSG00000182117NOP1010098.438ENSCATG00000015788NOP1010098.438Cercocebus_atys
ENSG00000182117NOP1010098.438ENSCLAG00000008807NOP1010098.438Chinchilla_lanigera
ENSG00000182117NOP1010098.438ENSCSAG00000007099NOP1010098.438Chlorocebus_sabaeus
ENSG00000182117NOP1010087.500ENSCPBG00000012352NOP1010087.500Chrysemys_picta_bellii
ENSG00000182117NOP1010064.615ENSCSAVG00000007794-10064.615Ciona_savignyi
ENSG00000182117NOP1010095.312ENSCANG00000003697-10095.312Colobus_angolensis_palliatus
ENSG00000182117NOP1072100.000ENSCANG00000043019-82100.000Colobus_angolensis_palliatus
ENSG00000182117NOP1010098.438ENSCGRG00001021300Nop1010098.438Cricetulus_griseus_chok1gshd
ENSG00000182117NOP1010098.438ENSCGRG00000008874Nop1010098.438Cricetulus_griseus_crigri
ENSG00000182117NOP1010076.562ENSCSEG00000017586nop1010076.562Cynoglossus_semilaevis
ENSG00000182117NOP1010078.125ENSCVAG00000015581nop1010078.125Cyprinodon_variegatus
ENSG00000182117NOP1010081.250ENSDARG00000104227nop1010081.250Danio_rerio
ENSG00000182117NOP1010098.438ENSDNOG00000046800NOP1010098.438Dasypus_novemcinctus
ENSG00000182117NOP1010092.188ENSDORG00000024280Nop1010092.188Dipodomys_ordii
ENSG00000182117NOP109866.667FBgn0033548CG76379866.667Drosophila_melanogaster
ENSG00000182117NOP1010093.750ENSETEG00000011755NOP1010093.750Echinops_telfairi
ENSG00000182117NOP1010070.312ENSEBUG00000011066nop1010070.312Eptatretus_burgeri
ENSG00000182117NOP1010098.438ENSEASG00005017286NOP1010098.438Equus_asinus_asinus
ENSG00000182117NOP1010098.438ENSECAG00000040181NOP1010098.438Equus_caballus
ENSG00000182117NOP1010086.154ENSEEUG00000008802-10086.154Erinaceus_europaeus
ENSG00000182117NOP1010078.125ENSELUG00000008752NOLA310078.125Esox_lucius
ENSG00000182117NOP1010096.875ENSFCAG00000034372NOP1010096.875Felis_catus
ENSG00000182117NOP1010067.188ENSFALG00000006188-9667.188Ficedula_albicollis
ENSG00000182117NOP1010067.188ENSFALG00000005997-10067.188Ficedula_albicollis
ENSG00000182117NOP1010096.875ENSFDAG00000016743NOP1010096.875Fukomys_damarensis
ENSG00000182117NOP1010075.000ENSFHEG00000020631nop1010075.000Fundulus_heteroclitus
ENSG00000182117NOP1010070.312ENSGMOG00000004598nop1010070.312Gadus_morhua
ENSG00000182117NOP1010075.000ENSGAFG00000006754nop1010075.000Gambusia_affinis
ENSG00000182117NOP1010079.688ENSGACG00000018892nop1010079.688Gasterosteus_aculeatus
ENSG00000182117NOP1010087.500ENSGAGG00000001884NOP1010087.500Gopherus_agassizii
ENSG00000182117NOP10100100.000ENSGGOG00000001064NOP10100100.000Gorilla_gorilla
ENSG00000182117NOP1010075.000ENSHBUG00000022860nop1010075.000Haplochromis_burtoni
ENSG00000182117NOP1010096.875ENSHGLG00000005973NOP1010096.875Heterocephalus_glaber_female
ENSG00000182117NOP1010096.875ENSHGLG00100005877NOP1010096.875Heterocephalus_glaber_male
ENSG00000182117NOP1010075.000ENSHCOG00000000606nop1010075.000Hippocampus_comes
ENSG00000182117NOP1010076.562ENSIPUG00000009890nop1010076.562Ictalurus_punctatus
ENSG00000182117NOP10100100.000ENSSTOG00000020229NOP10100100.000Ictidomys_tridecemlineatus
ENSG00000182117NOP1010092.188ENSSTOG00000022852-10092.188Ictidomys_tridecemlineatus
ENSG00000182117NOP1010098.438ENSJJAG00000017552Nop1010098.438Jaculus_jaculus
ENSG00000182117NOP1010075.000ENSKMAG00000004272nop1010075.000Kryptolebias_marmoratus
ENSG00000182117NOP1010078.125ENSLBEG00000004587nop1010078.125Labrus_bergylta
ENSG00000182117NOP1010084.375ENSLACG00000002802NOP1010084.375Latimeria_chalumnae
ENSG00000182117NOP1010096.875ENSLAFG00000011789NOP1010096.875Loxodonta_africana
ENSG00000182117NOP1010098.438ENSMFAG00000035229NOP1010098.438Macaca_fascicularis
ENSG00000182117NOP1010087.500ENSMMUG00000048776-10087.500Macaca_mulatta
ENSG00000182117NOP1072100.000ENSMMUG00000040642-82100.000Macaca_mulatta
ENSG00000182117NOP1010089.062ENSMMUG00000046412-10089.062Macaca_mulatta
ENSG00000182117NOP1010098.438ENSMNEG00000029639NOP1010098.438Macaca_nemestrina
ENSG00000182117NOP1010098.438ENSMLEG00000040974NOP1010098.438Mandrillus_leucophaeus
ENSG00000182117NOP1010079.688ENSMAMG00000011645nop1010079.688Mastacembelus_armatus
ENSG00000182117NOP1010059.375ENSMAMG00000011331nop1010059.375Mastacembelus_armatus
ENSG00000182117NOP1010075.000ENSMZEG00005021139nop1010075.000Maylandia_zebra
ENSG00000182117NOP108386.792ENSMICG00000004669-9686.792Microcebus_murinus
ENSG00000182117NOP1010096.875ENSMICG00000036844-10096.875Microcebus_murinus
ENSG00000182117NOP1010084.375ENSMICG00000047479-10084.375Microcebus_murinus
ENSG00000182117NOP10100100.000ENSMOCG00000016975Nop10100100.000Microtus_ochrogaster
ENSG00000182117NOP108698.182ENSMOCG00000022382-10098.182Microtus_ochrogaster
ENSG00000182117NOP1010078.125ENSMMOG00000020677nop1010078.125Mola_mola
ENSG00000182117NOP1010093.750ENSMODG00000023989-10093.750Monodelphis_domestica
ENSG00000182117NOP1010078.125ENSMALG00000008635nop1010078.125Monopterus_albus
ENSG00000182117NOP10100100.000MGP_CAROLIEiJ_G0024087Nop10100100.000Mus_caroli
ENSG00000182117NOP10100100.000ENSMUSG00000027133Nop10100100.000Mus_musculus
ENSG00000182117NOP10100100.000MGP_PahariEiJ_G0025530Nop10100100.000Mus_pahari
ENSG00000182117NOP10100100.000MGP_SPRETEiJ_G0025003Nop10100100.000Mus_spretus
ENSG00000182117NOP1010096.875ENSMLUG00000002782NOP1010096.875Myotis_lucifugus
ENSG00000182117NOP1010096.875ENSNGAG00000000442Nop1010096.875Nannospalax_galili
ENSG00000182117NOP1010073.438ENSNBRG00000024222nop1010073.438Neolamprologus_brichardi
ENSG00000182117NOP10100100.000ENSNLEG00000011119NOP10100100.000Nomascus_leucogenys
ENSG00000182117NOP1010089.062ENSMEUG00000012779-10089.062Notamacropus_eugenii
ENSG00000182117NOP1010093.750ENSMEUG00000004655-10093.750Notamacropus_eugenii
ENSG00000182117NOP109895.238ENSODEG00000019659-10095.238Octodon_degus
ENSG00000182117NOP10100100.000ENSODEG00000003071NOP10100100.000Octodon_degus
ENSG00000182117NOP1010082.812ENSODEG00000020305-10082.812Octodon_degus
ENSG00000182117NOP1010075.000ENSONIG00000000291nop1010075.000Oreochromis_niloticus
ENSG00000182117NOP107389.362ENSOANG00000002116-8589.362Ornithorhynchus_anatinus
ENSG00000182117NOP107389.362ENSOANG00000007697-8589.362Ornithorhynchus_anatinus
ENSG00000182117NOP1010093.750ENSOCUG00000021852-10093.750Oryctolagus_cuniculus
ENSG00000182117NOP1010096.875ENSOCUG00000006173-10096.875Oryctolagus_cuniculus
ENSG00000182117NOP1010073.438ENSORLG00000030632nop1010073.438Oryzias_latipes
ENSG00000182117NOP1010073.438ENSORLG00020019829nop1010073.438Oryzias_latipes_hni
ENSG00000182117NOP1010073.438ENSORLG00015021302nop1010073.438Oryzias_latipes_hsok
ENSG00000182117NOP1010073.438ENSOMEG00000019282nop1010073.438Oryzias_melastigma
ENSG00000182117NOP1010098.438ENSOGAG00000006139NOP1010098.438Otolemur_garnettii
ENSG00000182117NOP1010096.875ENSOARG00000019881NOP1010096.875Ovis_aries
ENSG00000182117NOP10100100.000ENSPPAG00000034781NOP10100100.000Pan_paniscus
ENSG00000182117NOP1010096.875ENSPPRG00000005535NOP1010096.875Panthera_pardus
ENSG00000182117NOP1010096.875ENSPTIG00000019787NOP1010096.875Panthera_tigris_altaica
ENSG00000182117NOP10100100.000ENSPTRG00000006880NOP10100100.000Pan_troglodytes
ENSG00000182117NOP1010098.438ENSPANG00000019824NOP1010098.438Papio_anubis
ENSG00000182117NOP1010081.250ENSPKIG00000011396nop1010081.250Paramormyrops_kingsleyae
ENSG00000182117NOP1010085.938ENSPSIG00000017131NOP1010085.938Pelodiscus_sinensis
ENSG00000182117NOP1010095.312ENSPEMG00000005322-10095.312Peromyscus_maniculatus_bairdii
ENSG00000182117NOP1010093.750ENSPCIG00000008101-10093.750Phascolarctos_cinereus
ENSG00000182117NOP1010075.000ENSPFOG00000002606nop1010075.000Poecilia_formosa
ENSG00000182117NOP1010075.000ENSPLAG00000018858nop1010075.000Poecilia_latipinna
ENSG00000182117NOP1010075.000ENSPMEG00000022116nop1010075.000Poecilia_mexicana
ENSG00000182117NOP1010078.125ENSPREG00000009335nop1010078.125Poecilia_reticulata
ENSG00000182117NOP10100100.000ENSPPYG00000006313NOP10100100.000Pongo_abelii
ENSG00000182117NOP1010093.750ENSPCAG00000015777NOP1010093.750Procavia_capensis
ENSG00000182117NOP1010098.438ENSPCOG00000025608NOP1010098.438Propithecus_coquereli
ENSG00000182117NOP1010098.438ENSPVAG00000003829NOP1010098.438Pteropus_vampyrus
ENSG00000182117NOP1010075.000ENSPNYG00000021074nop1010075.000Pundamilia_nyererei
ENSG00000182117NOP1010079.688ENSPNAG00000022841nop1010079.688Pygocentrus_nattereri
ENSG00000182117NOP10100100.000ENSRNOG00000005184Nop10100100.000Rattus_norvegicus
ENSG00000182117NOP1010096.875ENSRBIG00000025645-10096.875Rhinopithecus_bieti
ENSG00000182117NOP1010098.438ENSRBIG00000022550-10098.438Rhinopithecus_bieti
ENSG00000182117NOP1010098.438ENSRROG00000044115-10098.438Rhinopithecus_roxellana
ENSG00000182117NOP1010096.875ENSRROG00000013119-10096.875Rhinopithecus_roxellana
ENSG00000182117NOP109160.345YHR072W-A-10060.345Saccharomyces_cerevisiae
ENSG00000182117NOP1010098.438ENSSBOG00000036330-10098.438Saimiri_boliviensis_boliviensis
ENSG00000182117NOP1010098.438ENSSBOG00000028553-10098.438Saimiri_boliviensis_boliviensis
ENSG00000182117NOP1010093.750ENSSHAG00000004294NOP1010093.750Sarcophilus_harrisii
ENSG00000182117NOP1010081.250ENSSFOG00015022487nop1010081.250Scleropages_formosus
ENSG00000182117NOP1010070.769ENSSMAG00000014319nop1010070.769Scophthalmus_maximus
ENSG00000182117NOP1010076.562ENSSDUG00000014573nop1010076.562Seriola_dumerili
ENSG00000182117NOP1010076.562ENSSLDG00000008486nop1010076.562Seriola_lalandi_dorsalis
ENSG00000182117NOP109755.224ENSSLDG00000000703nop109755.224Seriola_lalandi_dorsalis
ENSG00000182117NOP109193.103ENSSARG00000005495-10093.103Sorex_araneus
ENSG00000182117NOP109193.103ENSSARG00000013641-10093.103Sorex_araneus
ENSG00000182117NOP1010085.938ENSSPUG00000015756NOP1010085.938Sphenodon_punctatus
ENSG00000182117NOP1010076.562ENSSPAG00000012478nop1010076.562Stegastes_partitus
ENSG00000182117NOP1010096.875ENSSSCG00000036960NOP1010096.875Sus_scrofa
ENSG00000182117NOP1010060.938ENSTGUG00000015223-10060.938Taeniopygia_guttata
ENSG00000182117NOP1010065.625ENSTGUG00000016430-10065.625Taeniopygia_guttata
ENSG00000182117NOP1010078.125ENSTRUG00000004834nop1010078.125Takifugu_rubripes
ENSG00000182117NOP1010078.125ENSTNIG00000000971nop1010078.125Tetraodon_nigroviridis
ENSG00000182117NOP1010098.438ENSTBEG00000003461NOP1010098.438Tupaia_belangeri
ENSG00000182117NOP1010096.875ENSTTRG00000007238NOP1010096.875Tursiops_truncatus
ENSG00000182117NOP1010096.875ENSUAMG00000004907NOP1010096.875Ursus_americanus
ENSG00000182117NOP1010096.875ENSUMAG00000016880NOP1010096.875Ursus_maritimus
ENSG00000182117NOP1010096.875ENSVPAG00000007179NOP1010096.875Vicugna_pacos
ENSG00000182117NOP1010092.188ENSVVUG00000025291NOP1010092.188Vulpes_vulpes
ENSG00000182117NOP1010076.562ENSXETG00000024771nop1010076.562Xenopus_tropicalis
ENSG00000182117NOP109257.627ENSXCOG00000006786nop108157.627Xiphophorus_couchianus
ENSG00000182117NOP1010078.125ENSXMAG00000025055nop1010078.125Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000454snoRNA guided rRNA pseudouridine synthesis-IEAProcess
GO:0001522pseudouridine synthesis9843512.NASProcess
GO:0003723RNA binding18082603.IPIFunction
GO:0005515protein binding16601202.23685356.25416956.25910212.30021884.IPIFunction
GO:0005654nucleoplasm-TASComponent
GO:0005697telomerase holoenzyme complex18082603.29695869.IDAComponent
GO:0005697telomerase holoenzyme complex20351177.22527283.TASComponent
GO:0005732small nucleolar ribonucleoprotein complex9843512.TASComponent
GO:0007004telomere maintenance via telomerase29695869.IDAProcess
GO:0007004telomere maintenance via telomerase22527283.TASProcess
GO:0016604nuclear body-IDAComponent
GO:0031118rRNA pseudouridine synthesis21873635.IBAProcess
GO:0031118rRNA pseudouridine synthesis-TASProcess
GO:0031120snRNA pseudouridine synthesis21873635.IBAProcess
GO:0031429box H/ACA snoRNP complex21873635.IBAComponent
GO:0031429box H/ACA snoRNP complex18082603.IDAComponent
GO:0031429box H/ACA snoRNP complex22527283.TASComponent
GO:0034513box H/ACA snoRNA binding21873635.IBAFunction
GO:0034513box H/ACA snoRNA binding18082603.IPIFunction
GO:0070034telomerase RNA binding21873635.IBAFunction
GO:0070034telomerase RNA binding18082603.IPIFunction
GO:0070034telomerase RNA binding22527283.TASFunction
GO:0072589box H/ACA scaRNP complex22527283.TASComponent
GO:0090661box H/ACA telomerase RNP complex21873635.IBAComponent
GO:0090661box H/ACA telomerase RNP complex18082603.IDAComponent
GO:0090661box H/ACA telomerase RNP complex22527283.TASComponent
GO:1904874positive regulation of telomerase RNA localization to Cajal body25467444.HMPProcess

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