EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000183011 (Gene tree)
Gene ID: 84316
Gene Symbol: NAA38
Alias: MGC14151|PFAAP2|LSMD1
Full Name: N(alpha)-acetyltransferase 38, NatC auxiliary subunit
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 28,599 bases
Position: chr17:7,856,685-7,885,283
Accession: 28212
RBP type: canonical RBP
Summary: (N(Alpha)-Acetyltransferase 38, NatC Auxiliary Subunit) is a Protein Coding gene. Among its related pathways are Retrograde transport at the Trans-Golgi-Network and Vesicle-mediated transport.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000461545	LSM	PF01423.22	8.1e-13	1	1
ENSP00000460172	LSM	PF01423.22	1.5e-12	1	1
ENSP00000332103	LSM	PF01423.22	3.3e-12	1	1
ENSP00000460841	LSM	PF01423.22	1.6e-11	1	1
ENSP00000459449	LSM	PF01423.22	4.6e-10	1	1
ENSP00000460085	LSM	PF01423.22	5e-09	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000576384	NAA38-206	424	-	ENSP00000460085	83 (aa)	-	I3L310
ENST00000575771	NAA38-205	852	XM_024451004	ENSP00000460172	125 (aa)	XP_024306772	Q9BRA0
ENST00000570555	NAA38-202	783	-	-	- (aa)	-	-
ENST00000576861	NAA38-207	556	XM_011524037	ENSP00000461545	99 (aa)	XP_011522339	I3L4V0
ENST00000575208	NAA38-204	529	-	ENSP00000459449	73 (aa)	-	A0A0B4J297
ENST00000333775	NAA38-201	999	-	ENSP00000332103	173 (aa)	-	Q9BRA0
ENST00000575071	NAA38-203	553	-	ENSP00000460841	135 (aa)	-	I3L3Z2

Gene Model

Click here to download ENSG00000183011's gene model file

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000183011	rs74439044	17	7877701	T	Heel bone mineral density	28869591	[0.026-0.049] unit increase	0.0375947	EFO_0009270
ENSG00000183011	rs74439044	17	7877701	T	Heel bone mineral density	28869591	[0.024-0.055] unit increase	0.0394261	EFO_0009270
ENSG00000183011	rs377079849	17	7884458	C	Myeloid white cell count	27863252	[0.015-0.031] unit decrease	0.02311696	EFO_0007988
ENSG00000183011	rs377079849	17	7884458	C	Granulocyte count	27863252	[0.016-0.031] unit decrease	0.02318978	EFO_0007987
ENSG00000183011	rs377079849	17	7884458	C	Sum neutrophil eosinophil counts	27863252	[0.016-0.031] unit decrease	0.02337324	EFO_0004833\|EFO_0004842
ENSG00000183011	rs74439044	17	7877701	?	Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test)	29455858			EFO_0006527\|EFO_0006336
ENSG00000183011	rs74439044	17	7877701	?	Diastolic blood pressure x smoking status (current vs non-current) interaction (2df test)	29455858			EFO_0006527\|EFO_0006336
ENSG00000183011	rs74439044	17	7877701	?	Systolic blood pressure x smoking status (current vs non-current) interaction (2df test)	29455858			EFO_0006527\|EFO_0006335
ENSG00000183011	rs74439044	17	7877701	?	Systolic blood pressure x smoking status (current vs non-current) interaction (2df test)	29455858			EFO_0006527\|EFO_0006335
ENSG00000183011	rs74439044	17	7877701	?	Systolic blood pressure x smoking status (ever vs never) interaction (2df test)	29455858			EFO_0006527\|EFO_0006335
ENSG00000183011	rs74439044	17	7877701	?	Systolic blood pressure x smoking status (ever vs never) interaction (2df test)	29455858			EFO_0006527\|EFO_0006335
ENSG00000183011	rs74439044	17	7877701	?	Diastolic blood pressure x smoking status (ever vs never) interaction (2df test)	29455858			EFO_0006527\|EFO_0006336
ENSG00000183011	rs74439044	17	7877701	?	Diastolic blood pressure x smoking status (ever vs never) interaction (2df test)	29455858			EFO_0006527\|EFO_0006336
ENSG00000183011	rs151268686	17	7877373	?	Heel bone mineral density	30048462	[0.04-0.056] unit increase	0.048145	EFO_0009270
ENSG00000183011	rs57414300	17	7878382	?	Heel bone mineral density	30048462	[0.018-0.028] unit increase	0.0230866	EFO_0009270
ENSG00000183011	rs74439044	17	7877701	?	Heel bone mineral density	30048462	[0.033-0.047] unit increase	0.039678	EFO_0009270
ENSG00000183011	rs76833657	17	7877702	G	Heel bone mineral density	30598549	[0.039-0.053] unit increase	0.045626	EFO_0009270
ENSG00000183011	rs74439044	17	7877701	?	Cardiovascular disease	30595370			EFO_0000319
ENSG00000183011	rs76833657	17	7877702	?	Heel bone mineral density	30595370			EFO_0009270

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000183011's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000183011	NAA38	92	85.075	ENSAPOG00000005647	naa38	81	75.824	Acanthochromis_polyacanthus
ENSG00000183011	NAA38	100	98.630	ENSAMEG00000016995	NAA38	99	84.118	Ailuropoda_melanoleuca
ENSG00000183011	NAA38	92	83.582	ENSACIG00000019730	naa38	87	83.582	Amphilophus_citrinellus
ENSG00000183011	NAA38	92	85.075	ENSAOCG00000023811	naa38	79	77.273	Amphiprion_ocellaris
ENSG00000183011	NAA38	92	85.075	ENSAPEG00000006441	naa38	79	77.273	Amphiprion_percula
ENSG00000183011	NAA38	92	85.075	ENSATEG00000001072	naa38	80	78.161	Anabas_testudineus
ENSG00000183011	NAA38	100	89.041	ENSACAG00000004477	NAA38	76	79.787	Anolis_carolinensis
ENSG00000183011	NAA38	100	100.000	ENSANAG00000027273	NAA38	100	98.519	Aotus_nancymaae
ENSG00000183011	NAA38	92	83.582	ENSACLG00000009549	naa38	79	76.136	Astatotilapia_calliptera
ENSG00000183011	NAA38	92	88.060	ENSAMXG00000037469	naa38	86	76.667	Astyanax_mexicanus
ENSG00000183011	NAA38	100	98.630	ENSBTAG00000014695	NAA38	100	96.825	Bos_taurus
ENSG00000183011	NAA38	79	36.207	WBGene00021682	Y48G1C.9	76	30.000	Caenorhabditis_elegans
ENSG00000183011	NAA38	100	100.000	ENSCJAG00000014843	NAA38	100	98.519	Callithrix_jacchus
ENSG00000183011	NAA38	92	75.781	ENSCAFG00000032682	-	73	75.781	Canis_familiaris
ENSG00000183011	NAA38	92	75.781	ENSCAFG00020007495	-	73	75.781	Canis_lupus_dingo
ENSG00000183011	NAA38	100	98.630	ENSCHIG00000023618	NAA38	100	96.825	Capra_hircus
ENSG00000183011	NAA38	100	100.000	ENSTSYG00000033326	NAA38	100	98.400	Carlito_syrichta
ENSG00000183011	NAA38	100	97.260	ENSCPOG00000032412	NAA38	100	96.000	Cavia_porcellus
ENSG00000183011	NAA38	100	100.000	ENSCCAG00000021358	NAA38	100	97.778	Cebus_capucinus
ENSG00000183011	NAA38	100	100.000	ENSCATG00000032806	NAA38	100	99.200	Cercocebus_atys
ENSG00000183011	NAA38	100	98.630	ENSCLAG00000015879	NAA38	100	96.800	Chinchilla_lanigera
ENSG00000183011	NAA38	100	100.000	ENSCSAG00000011136	NAA38	100	99.200	Chlorocebus_sabaeus
ENSG00000183011	NAA38	100	98.630	ENSCHOG00000009659	NAA38	100	91.935	Choloepus_hoffmanni
ENSG00000183011	NAA38	67	74.242	ENSCPBG00000012645	NAA38	51	70.270	Chrysemys_picta_bellii
ENSG00000183011	NAA38	100	100.000	ENSCANG00000038998	NAA38	100	98.990	Colobus_angolensis_palliatus
ENSG00000183011	NAA38	100	95.890	ENSCGRG00001016403	Naa38	100	95.200	Cricetulus_griseus_chok1gshd
ENSG00000183011	NAA38	92	83.582	ENSCSEG00000004480	naa38	82	78.571	Cynoglossus_semilaevis
ENSG00000183011	NAA38	92	86.567	ENSCVAG00000007301	naa38	81	78.409	Cyprinodon_variegatus
ENSG00000183011	NAA38	99	80.556	ENSDARG00000099122	naa38	81	76.136	Danio_rerio
ENSG00000183011	NAA38	100	98.630	ENSDNOG00000040664	-	100	96.667	Dasypus_novemcinctus
ENSG00000183011	NAA38	100	98.630	ENSDORG00000010169	Naa38	100	96.800	Dipodomys_ordii
ENSG00000183011	NAA38	85	51.613	FBgn0051950	CG31950	68	41.379	Drosophila_melanogaster
ENSG00000183011	NAA38	97	73.239	ENSEBUG00000002518	naa38	84	63.158	Eptatretus_burgeri
ENSG00000183011	NAA38	100	98.630	ENSEASG00005019355	NAA38	100	86.857	Equus_asinus_asinus
ENSG00000183011	NAA38	100	95.276	ENSECAG00000037837	NAA38	100	95.276	Equus_caballus
ENSG00000183011	NAA38	92	88.060	ENSELUG00000019427	naa38	73	80.952	Esox_lucius
ENSG00000183011	NAA38	100	98.630	ENSFCAG00000026713	NAA38	100	94.949	Felis_catus
ENSG00000183011	NAA38	100	97.260	ENSFDAG00000012656	NAA38	100	95.200	Fukomys_damarensis
ENSG00000183011	NAA38	92	86.567	ENSFHEG00000017032	naa38	81	79.545	Fundulus_heteroclitus
ENSG00000183011	NAA38	93	83.824	ENSGMOG00000013571	naa38	91	76.744	Gadus_morhua
ENSG00000183011	NAA38	90	77.273	ENSGALG00000054037	-	90	70.787	Gallus_gallus
ENSG00000183011	NAA38	90	77.273	ENSGALG00000052672	-	81	74.684	Gallus_gallus
ENSG00000183011	NAA38	92	86.567	ENSGAFG00000004021	naa38	79	80.233	Gambusia_affinis
ENSG00000183011	NAA38	92	83.582	ENSGACG00000019273	naa38	80	77.907	Gasterosteus_aculeatus
ENSG00000183011	NAA38	100	78.313	ENSGAGG00000002550	NAA38	100	78.313	Gopherus_agassizii
ENSG00000183011	NAA38	100	100.000	ENSGGOG00000015317	-	100	99.259	Gorilla_gorilla
ENSG00000183011	NAA38	92	83.582	ENSHBUG00000019918	naa38	79	76.136	Haplochromis_burtoni
ENSG00000183011	NAA38	100	97.260	ENSHGLG00000014324	NAA38	100	95.200	Heterocephalus_glaber_female
ENSG00000183011	NAA38	100	97.260	ENSHGLG00100013112	NAA38	100	95.200	Heterocephalus_glaber_male
ENSG00000183011	NAA38	92	80.597	ENSHCOG00000010193	naa38	73	72.093	Hippocampus_comes
ENSG00000183011	NAA38	92	82.090	ENSIPUG00000021657	naa38	89	72.826	Ictalurus_punctatus
ENSG00000183011	NAA38	100	98.630	ENSSTOG00000025950	NAA38	100	97.600	Ictidomys_tridecemlineatus
ENSG00000183011	NAA38	100	95.890	ENSJJAG00000013236	Naa38	100	95.890	Jaculus_jaculus
ENSG00000183011	NAA38	97	80.282	ENSKMAG00000019461	naa38	95	63.415	Kryptolebias_marmoratus
ENSG00000183011	NAA38	92	85.075	ENSLBEG00000028489	naa38	78	77.381	Labrus_bergylta
ENSG00000183011	NAA38	100	82.192	ENSLACG00000007757	NAA38	95	71.000	Latimeria_chalumnae
ENSG00000183011	NAA38	95	84.058	ENSLOCG00000013981	naa38	77	77.273	Lepisosteus_oculatus
ENSG00000183011	NAA38	100	97.260	ENSLAFG00000009169	NAA38	100	96.000	Loxodonta_africana
ENSG00000183011	NAA38	100	100.000	ENSMFAG00000037580	NAA38	100	98.990	Macaca_fascicularis
ENSG00000183011	NAA38	100	100.000	ENSMMUG00000008178	NAA38	100	99.200	Macaca_mulatta
ENSG00000183011	NAA38	100	100.000	ENSMNEG00000031597	NAA38	100	98.990	Macaca_nemestrina
ENSG00000183011	NAA38	100	100.000	ENSMLEG00000037461	NAA38	100	98.990	Mandrillus_leucophaeus
ENSG00000183011	NAA38	92	85.075	ENSMAMG00000000538	naa38	83	72.632	Mastacembelus_armatus
ENSG00000183011	NAA38	92	83.582	ENSMZEG00005021265	naa38	79	76.136	Maylandia_zebra
ENSG00000183011	NAA38	90	77.273	ENSMGAG00000017259	NAA38	93	74.667	Meleagris_gallopavo
ENSG00000183011	NAA38	100	97.260	ENSMAUG00000020052	Naa38	100	96.000	Mesocricetus_auratus
ENSG00000183011	NAA38	100	100.000	ENSMICG00000015147	NAA38	100	97.980	Microcebus_murinus
ENSG00000183011	NAA38	100	97.260	ENSMOCG00000002129	Naa38	100	96.000	Microtus_ochrogaster
ENSG00000183011	NAA38	92	86.567	ENSMMOG00000012705	naa38	74	80.952	Mola_mola
ENSG00000183011	NAA38	100	95.890	ENSMODG00000007434	NAA38	100	91.270	Monodelphis_domestica
ENSG00000183011	NAA38	92	85.075	ENSMALG00000001438	naa38	75	78.571	Monopterus_albus
ENSG00000183011	NAA38	100	97.260	MGP_CAROLIEiJ_G0016568	Naa38	100	96.000	Mus_caroli
ENSG00000183011	NAA38	100	97.260	ENSMUSG00000059278	Naa38	100	96.000	Mus_musculus
ENSG00000183011	NAA38	100	94.521	MGP_PahariEiJ_G0017699	Naa38	100	94.400	Mus_pahari
ENSG00000183011	NAA38	100	95.890	MGP_SPRETEiJ_G0017404	Naa38	100	95.200	Mus_spretus
ENSG00000183011	NAA38	100	98.630	ENSMPUG00000008886	NAA38	100	97.600	Mustela_putorius_furo
ENSG00000183011	NAA38	100	97.260	ENSNGAG00000019042	Naa38	100	95.200	Nannospalax_galili
ENSG00000183011	NAA38	92	83.582	ENSNBRG00000000619	naa38	79	76.136	Neolamprologus_brichardi
ENSG00000183011	NAA38	100	98.795	ENSNLEG00000027601	NAA38	100	98.519	Nomascus_leucogenys
ENSG00000183011	NAA38	100	95.890	ENSMEUG00000015533	NAA38	99	67.039	Notamacropus_eugenii
ENSG00000183011	NAA38	100	97.260	ENSOPRG00000008383	NAA38	99	77.841	Ochotona_princeps
ENSG00000183011	NAA38	100	98.630	ENSODEG00000017702	NAA38	100	96.800	Octodon_degus
ENSG00000183011	NAA38	92	83.582	ENSONIG00000009306	naa38	79	76.136	Oreochromis_niloticus
ENSG00000183011	NAA38	100	98.630	ENSOCUG00000017284	NAA38	100	97.600	Oryctolagus_cuniculus
ENSG00000183011	NAA38	92	85.075	ENSORLG00000007119	naa38	87	62.393	Oryzias_latipes
ENSG00000183011	NAA38	92	85.075	ENSORLG00020008335	naa38	87	62.393	Oryzias_latipes_hni
ENSG00000183011	NAA38	92	85.075	ENSORLG00015005138	naa38	79	76.136	Oryzias_latipes_hsok
ENSG00000183011	NAA38	97	81.690	ENSOMEG00000013718	naa38	82	73.913	Oryzias_melastigma
ENSG00000183011	NAA38	100	100.000	ENSOGAG00000030727	NAA38	100	86.364	Otolemur_garnettii
ENSG00000183011	NAA38	81	95.062	ENSOARG00000017478	NAA38	99	81.013	Ovis_aries
ENSG00000183011	NAA38	100	100.000	ENSPPAG00000026097	NAA38	100	99.259	Pan_paniscus
ENSG00000183011	NAA38	100	98.630	ENSPPRG00000012023	NAA38	99	85.965	Panthera_pardus
ENSG00000183011	NAA38	100	98.795	ENSPTRG00000008712	NAA38	100	98.519	Pan_troglodytes
ENSG00000183011	NAA38	100	100.000	ENSPANG00000023935	NAA38	100	98.990	Papio_anubis
ENSG00000183011	NAA38	92	85.075	ENSPMGG00000008216	naa38	75	79.762	Periophthalmus_magnuspinnatus
ENSG00000183011	NAA38	100	97.260	ENSPEMG00000015014	Naa38	100	96.000	Peromyscus_maniculatus_bairdii
ENSG00000183011	NAA38	97	74.648	ENSPMAG00000006001	naa38	82	69.880	Petromyzon_marinus
ENSG00000183011	NAA38	92	86.567	ENSPFOG00000012670	naa38	81	79.545	Poecilia_formosa
ENSG00000183011	NAA38	92	86.567	ENSPLAG00000002707	naa38	81	79.545	Poecilia_latipinna
ENSG00000183011	NAA38	92	86.567	ENSPMEG00000016652	naa38	90	77.419	Poecilia_mexicana
ENSG00000183011	NAA38	92	86.567	ENSPREG00000011017	naa38	64	74.737	Poecilia_reticulata
ENSG00000183011	NAA38	100	98.630	ENSPCAG00000013613	NAA38	100	83.237	Procavia_capensis
ENSG00000183011	NAA38	100	100.000	ENSPCOG00000020844	NAA38	100	96.970	Propithecus_coquereli
ENSG00000183011	NAA38	100	98.630	ENSPVAG00000016342	NAA38	100	83.908	Pteropus_vampyrus
ENSG00000183011	NAA38	92	83.582	ENSPNYG00000021415	naa38	79	76.136	Pundamilia_nyererei
ENSG00000183011	NAA38	92	88.060	ENSPNAG00000020828	naa38	92	76.596	Pygocentrus_nattereri
ENSG00000183011	NAA38	100	97.260	ENSRNOG00000009823	Naa38	100	96.000	Rattus_norvegicus
ENSG00000183011	NAA38	100	100.000	ENSRBIG00000039054	NAA38	100	98.990	Rhinopithecus_bieti
ENSG00000183011	NAA38	100	100.000	ENSRROG00000037370	NAA38	100	98.990	Rhinopithecus_roxellana
ENSG00000183011	NAA38	100	98.630	ENSSBOG00000035591	NAA38	100	90.751	Saimiri_boliviensis_boliviensis
ENSG00000183011	NAA38	92	89.552	ENSSFOG00015023111	naa38	72	86.076	Scleropages_formosus
ENSG00000183011	NAA38	92	83.582	ENSSMAG00000006429	naa38	87	83.582	Scophthalmus_maximus
ENSG00000183011	NAA38	92	85.075	ENSSDUG00000005842	naa38	77	79.070	Seriola_dumerili
ENSG00000183011	NAA38	92	85.075	ENSSLDG00000003013	naa38	77	79.070	Seriola_lalandi_dorsalis
ENSG00000183011	NAA38	100	97.260	ENSSARG00000006299	NAA38	100	83.333	Sorex_araneus
ENSG00000183011	NAA38	100	89.041	ENSSPUG00000014761	NAA38	100	81.633	Sphenodon_punctatus
ENSG00000183011	NAA38	92	85.075	ENSSPAG00000013671	naa38	79	77.273	Stegastes_partitus
ENSG00000183011	NAA38	100	98.630	ENSSSCG00000017971	NAA38	100	96.800	Sus_scrofa
ENSG00000183011	NAA38	92	85.075	ENSTRUG00000021566	naa38	75	78.571	Takifugu_rubripes
ENSG00000183011	NAA38	92	83.582	ENSTNIG00000012999	naa38	92	83.582	Tetraodon_nigroviridis
ENSG00000183011	NAA38	100	97.260	ENSTBEG00000011092	NAA38	100	85.475	Tupaia_belangeri
ENSG00000183011	NAA38	100	98.630	ENSUAMG00000005463	NAA38	100	97.600	Ursus_americanus
ENSG00000183011	NAA38	100	98.630	ENSUMAG00000017042	NAA38	56	94.286	Ursus_maritimus
ENSG00000183011	NAA38	100	98.630	ENSVPAG00000005503	NAA38	100	86.228	Vicugna_pacos
ENSG00000183011	NAA38	100	98.630	ENSVVUG00000028004	NAA38	100	96.800	Vulpes_vulpes
ENSG00000183011	NAA38	100	80.822	ENSXETG00000015633	naa38	100	60.800	Xenopus_tropicalis
ENSG00000183011	NAA38	100	80.822	ENSXCOG00000000768	naa38	75	76.087	Xiphophorus_couchianus
ENSG00000183011	NAA38	100	80.822	ENSXMAG00000028369	naa38	79	80.233	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	25416956.	IPI	Function
GO:0005634	nucleus	19398576.	IDA	Component
GO:0005737	cytoplasm	19398576.	IDA	Component
GO:0005844	polysome	19398576.	IDA	Component
GO:0031417	NatC complex	19398576.	IDA	Component
GO:0043066	negative regulation of apoptotic process	19398576.	IMP	Process