EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000183520 (Gene tree)
Gene ID: 51118
Gene Symbol: UTP11
Alias: CGI-94|UTP11L
Full Name: UTP11 small subunit processome component
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 15,568 bases
Position: chr1:38,009,258-38,024,825
Accession: 24329
RBP type: canonical RBP
Summary: (UTP11 Small Subunit Processome Component) is a Protein Coding gene. Among its related pathways are rRNA processing in the nucleus and cytosol and Gene Expression.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000362105	Utp11	PF03998.13	7.5e-73	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000488453	UTP11-204	1895	-	-	- (aa)	-	-
ENST00000373014	UTP11-201	2019	XM_011541555	ENSP00000362105	253 (aa)	XP_011539857	Q9Y3A2
ENST00000483182	UTP11-202	573	-	-	- (aa)	-	-
ENST00000486563	UTP11-203	750	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000183520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000183520's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000183520	UTP11	99	69.565	ENSAPOG00000024525	utp11l	99	69.565	Acanthochromis_polyacanthus
ENSG00000183520	UTP11	100	96.047	ENSAMEG00000001308	UTP11	100	96.047	Ailuropoda_melanoleuca
ENSG00000183520	UTP11	99	62.451	ENSACIG00000018523	utp11l	99	64.427	Amphilophus_citrinellus
ENSG00000183520	UTP11	99	69.170	ENSAOCG00000010085	utp11l	99	69.170	Amphiprion_ocellaris
ENSG00000183520	UTP11	99	68.775	ENSAPEG00000005214	utp11l	99	68.775	Amphiprion_percula
ENSG00000183520	UTP11	99	68.379	ENSATEG00000009240	utp11l	99	68.379	Anabas_testudineus
ENSG00000183520	UTP11	83	73.934	ENSAPLG00000014597	UTP11	99	73.934	Anas_platyrhynchos
ENSG00000183520	UTP11	55	66.906	ENSACAG00000017024	UTP11	100	66.906	Anolis_carolinensis
ENSG00000183520	UTP11	95	94.191	ENSANAG00000022223	UTP11	88	94.191	Aotus_nancymaae
ENSG00000183520	UTP11	99	68.775	ENSACLG00000000339	utp11l	99	68.775	Astatotilapia_calliptera
ENSG00000183520	UTP11	99	65.079	ENSAMXG00000039671	utp11l	99	65.079	Astyanax_mexicanus
ENSG00000183520	UTP11	100	94.862	ENSBTAG00000002306	UTP11	100	94.862	Bos_taurus
ENSG00000183520	UTP11	96	38.889	WBGene00007623	C16C10.2	96	38.889	Caenorhabditis_elegans
ENSG00000183520	UTP11	100	97.628	ENSCJAG00000002244	UTP11	100	97.628	Callithrix_jacchus
ENSG00000183520	UTP11	100	94.466	ENSCAFG00000003202	UTP11	100	94.466	Canis_familiaris
ENSG00000183520	UTP11	100	94.466	ENSCAFG00020006177	UTP11	100	94.466	Canis_lupus_dingo
ENSG00000183520	UTP11	100	94.466	ENSCHIG00000008534	UTP11	100	94.466	Capra_hircus
ENSG00000183520	UTP11	75	94.241	ENSTSYG00000005370	UTP11	82	94.241	Carlito_syrichta
ENSG00000183520	UTP11	94	86.498	ENSCAPG00000012976	UTP11	96	86.498	Cavia_aperea
ENSG00000183520	UTP11	100	94.862	ENSCPOG00000001043	UTP11	100	94.862	Cavia_porcellus
ENSG00000183520	UTP11	96	77.366	ENSCCAG00000025931	-	100	84.239	Cebus_capucinus
ENSG00000183520	UTP11	100	96.838	ENSCCAG00000034131	-	100	96.838	Cebus_capucinus
ENSG00000183520	UTP11	100	83.137	ENSCATG00000042680	UTP11	100	83.137	Cercocebus_atys
ENSG00000183520	UTP11	100	96.047	ENSCLAG00000012521	UTP11	100	96.047	Chinchilla_lanigera
ENSG00000183520	UTP11	100	99.605	ENSCSAG00000001122	UTP11	100	99.605	Chlorocebus_sabaeus
ENSG00000183520	UTP11	92	77.586	ENSCHOG00000012493	UTP11	100	77.586	Choloepus_hoffmanni
ENSG00000183520	UTP11	92	78.632	ENSCPBG00000018279	UTP11	99	78.632	Chrysemys_picta_bellii
ENSG00000183520	UTP11	99	41.569	ENSCING00000021175	-	99	41.569	Ciona_intestinalis
ENSG00000183520	UTP11	99	38.824	ENSCSAVG00000011594	-	99	38.824	Ciona_savignyi
ENSG00000183520	UTP11	100	85.771	ENSCANG00000043119	UTP11	100	85.771	Colobus_angolensis_palliatus
ENSG00000183520	UTP11	100	92.490	ENSCGRG00001024839	Utp11	100	92.490	Cricetulus_griseus_chok1gshd
ENSG00000183520	UTP11	100	92.490	ENSCGRG00000017523	Utp11	100	92.490	Cricetulus_griseus_crigri
ENSG00000183520	UTP11	99	69.170	ENSCSEG00000020281	utp11l	99	69.960	Cynoglossus_semilaevis
ENSG00000183520	UTP11	55	63.309	ENSCVAG00000000900	utp11l	88	63.309	Cyprinodon_variegatus
ENSG00000183520	UTP11	99	64.940	ENSDARG00000039958	utp11l	99	64.940	Danio_rerio
ENSG00000183520	UTP11	100	94.071	ENSDNOG00000035776	UTP11	100	94.071	Dasypus_novemcinctus
ENSG00000183520	UTP11	92	93.133	ENSDORG00000005348	Utp11	100	92.891	Dipodomys_ordii
ENSG00000183520	UTP11	99	40.316	FBgn0030063	CG1789	99	41.502	Drosophila_melanogaster
ENSG00000183520	UTP11	100	87.352	ENSETEG00000009665	UTP11	100	87.352	Echinops_telfairi
ENSG00000183520	UTP11	99	56.175	ENSEBUG00000008113	utp11l	99	56.175	Eptatretus_burgeri
ENSG00000183520	UTP11	100	96.047	ENSEASG00005013277	UTP11	100	96.047	Equus_asinus_asinus
ENSG00000183520	UTP11	100	95.652	ENSECAG00000021551	UTP11	100	95.652	Equus_caballus
ENSG00000183520	UTP11	60	89.189	ENSEEUG00000009447	-	67	89.189	Erinaceus_europaeus
ENSG00000183520	UTP11	99	65.354	ENSELUG00000017361	utp11l	83	65.354	Esox_lucius
ENSG00000183520	UTP11	100	96.443	ENSFCAG00000011023	UTP11	100	96.443	Felis_catus
ENSG00000183520	UTP11	92	67.672	ENSFALG00000001026	UTP11	100	67.672	Ficedula_albicollis
ENSG00000183520	UTP11	100	94.862	ENSFDAG00000015582	UTP11	100	94.862	Fukomys_damarensis
ENSG00000183520	UTP11	99	67.729	ENSFHEG00000018357	utp11l	99	67.729	Fundulus_heteroclitus
ENSG00000183520	UTP11	99	58.730	ENSGMOG00000006896	utp11l	99	58.730	Gadus_morhua
ENSG00000183520	UTP11	100	74.704	ENSGALG00000001502	UTP11	100	74.704	Gallus_gallus
ENSG00000183520	UTP11	99	66.534	ENSGAFG00000008883	utp11l	99	66.534	Gambusia_affinis
ENSG00000183520	UTP11	99	64.427	ENSGACG00000013680	utp11l	99	65.613	Gasterosteus_aculeatus
ENSG00000183520	UTP11	100	77.075	ENSGAGG00000014985	UTP11	84	77.075	Gopherus_agassizii
ENSG00000183520	UTP11	100	99.605	ENSGGOG00000022705	UTP11	100	99.605	Gorilla_gorilla
ENSG00000183520	UTP11	99	69.170	ENSHBUG00000009895	utp11l	99	69.170	Haplochromis_burtoni
ENSG00000183520	UTP11	100	95.257	ENSHGLG00000014499	UTP11L	100	95.257	Heterocephalus_glaber_female
ENSG00000183520	UTP11	100	95.257	ENSHGLG00100011557	UTP11L	100	95.257	Heterocephalus_glaber_male
ENSG00000183520	UTP11	99	63.922	ENSHCOG00000005969	utp11l	99	63.922	Hippocampus_comes
ENSG00000183520	UTP11	99	64.940	ENSIPUG00000017174	utp11	99	64.940	Ictalurus_punctatus
ENSG00000183520	UTP11	100	96.047	ENSSTOG00000022805	UTP11	100	96.047	Ictidomys_tridecemlineatus
ENSG00000183520	UTP11	100	92.885	ENSJJAG00000024043	Utp11	100	92.885	Jaculus_jaculus
ENSG00000183520	UTP11	99	68.254	ENSKMAG00000018988	utp11l	99	68.254	Kryptolebias_marmoratus
ENSG00000183520	UTP11	99	66.008	ENSLBEG00000008407	utp11l	99	66.798	Labrus_bergylta
ENSG00000183520	UTP11	100	61.417	ENSLACG00000006953	UTP11	100	61.417	Latimeria_chalumnae
ENSG00000183520	UTP11	99	71.713	ENSLOCG00000005795	utp11l	99	71.713	Lepisosteus_oculatus
ENSG00000183520	UTP11	100	91.700	ENSLAFG00000008100	UTP11	100	91.700	Loxodonta_africana
ENSG00000183520	UTP11	100	99.209	ENSMFAG00000030442	UTP11	100	99.209	Macaca_fascicularis
ENSG00000183520	UTP11	100	99.209	ENSMMUG00000020834	UTP11	100	99.209	Macaca_mulatta
ENSG00000183520	UTP11	100	99.605	ENSMNEG00000041655	UTP11	100	99.605	Macaca_nemestrina
ENSG00000183520	UTP11	100	99.605	ENSMLEG00000030408	UTP11	100	99.605	Mandrillus_leucophaeus
ENSG00000183520	UTP11	99	69.170	ENSMAMG00000007927	utp11l	99	69.170	Mastacembelus_armatus
ENSG00000183520	UTP11	99	68.775	ENSMZEG00005008323	utp11l	99	68.775	Maylandia_zebra
ENSG00000183520	UTP11	100	74.308	ENSMGAG00000002847	UTP11	100	74.308	Meleagris_gallopavo
ENSG00000183520	UTP11	100	92.885	ENSMAUG00000008360	Utp11	100	92.885	Mesocricetus_auratus
ENSG00000183520	UTP11	100	94.466	ENSMICG00000001496	UTP11	100	94.466	Microcebus_murinus
ENSG00000183520	UTP11	100	90.909	ENSMOCG00000021894	Utp11	100	90.909	Microtus_ochrogaster
ENSG00000183520	UTP11	99	66.667	ENSMMOG00000018530	utp11l	99	66.667	Mola_mola
ENSG00000183520	UTP11	96	78.601	ENSMODG00000017717	UTP11	100	79.051	Monodelphis_domestica
ENSG00000183520	UTP11	99	70.356	ENSMALG00000011660	utp11l	99	70.356	Monopterus_albus
ENSG00000183520	UTP11	100	89.328	MGP_CAROLIEiJ_G0026447	Utp11	100	89.328	Mus_caroli
ENSG00000183520	UTP11	100	90.514	ENSMUSG00000028907	Utp11	100	90.514	Mus_musculus
ENSG00000183520	UTP11	100	90.514	MGP_PahariEiJ_G0028778	Utp11	100	90.514	Mus_pahari
ENSG00000183520	UTP11	100	90.119	MGP_SPRETEiJ_G0027426	Utp11	100	90.909	Mus_spretus
ENSG00000183520	UTP11	100	96.443	ENSMPUG00000014493	UTP11	100	96.443	Mustela_putorius_furo
ENSG00000183520	UTP11	100	94.071	ENSMLUG00000001003	UTP11	100	94.071	Myotis_lucifugus
ENSG00000183520	UTP11	100	96.047	ENSNGAG00000013351	Utp11	100	96.047	Nannospalax_galili
ENSG00000183520	UTP11	99	68.379	ENSNBRG00000010435	utp11l	99	68.379	Neolamprologus_brichardi
ENSG00000183520	UTP11	100	99.209	ENSNLEG00000033980	UTP11	100	99.209	Nomascus_leucogenys
ENSG00000183520	UTP11	100	76.680	ENSMEUG00000010055	UTP11	100	76.680	Notamacropus_eugenii
ENSG00000183520	UTP11	100	93.281	ENSOPRG00000012818	UTP11	100	93.281	Ochotona_princeps
ENSG00000183520	UTP11	100	94.862	ENSODEG00000006050	-	100	94.862	Octodon_degus
ENSG00000183520	UTP11	100	71.654	ENSODEG00000003993	-	100	71.654	Octodon_degus
ENSG00000183520	UTP11	100	83.004	ENSODEG00000006891	-	100	83.004	Octodon_degus
ENSG00000183520	UTP11	99	67.194	ENSONIG00000016305	utp11l	99	68.775	Oreochromis_niloticus
ENSG00000183520	UTP11	92	76.824	ENSOANG00000002476	UTP11	100	76.824	Ornithorhynchus_anatinus
ENSG00000183520	UTP11	91	93.939	ENSOCUG00000007154	UTP11	100	93.939	Oryctolagus_cuniculus
ENSG00000183520	UTP11	99	69.841	ENSORLG00000014702	utp11l	99	69.841	Oryzias_latipes
ENSG00000183520	UTP11	99	69.841	ENSORLG00020018722	utp11l	99	69.841	Oryzias_latipes_hni
ENSG00000183520	UTP11	99	69.841	ENSORLG00015003784	utp11l	99	69.841	Oryzias_latipes_hsok
ENSG00000183520	UTP11	99	69.141	ENSOMEG00000019654	utp11l	99	69.141	Oryzias_melastigma
ENSG00000183520	UTP11	100	95.652	ENSOGAG00000016492	UTP11	100	95.652	Otolemur_garnettii
ENSG00000183520	UTP11	100	94.862	ENSOARG00000019954	UTP11	100	94.862	Ovis_aries
ENSG00000183520	UTP11	100	99.605	ENSPPAG00000030136	UTP11	100	99.605	Pan_paniscus
ENSG00000183520	UTP11	100	96.443	ENSPPRG00000022921	UTP11	100	96.443	Panthera_pardus
ENSG00000183520	UTP11	100	96.443	ENSPTIG00000008274	UTP11	100	96.443	Panthera_tigris_altaica
ENSG00000183520	UTP11	100	99.605	ENSPTRG00000000561	UTP11	100	99.605	Pan_troglodytes
ENSG00000183520	UTP11	99	99.603	ENSPANG00000018634	UTP11	99	99.603	Papio_anubis
ENSG00000183520	UTP11	99	66.270	ENSPKIG00000000780	utp11l	99	66.270	Paramormyrops_kingsleyae
ENSG00000183520	UTP11	92	78.541	ENSPSIG00000004184	UTP11	94	78.541	Pelodiscus_sinensis
ENSG00000183520	UTP11	99	67.460	ENSPMGG00000002273	utp11l	99	67.460	Periophthalmus_magnuspinnatus
ENSG00000183520	UTP11	100	91.700	ENSPEMG00000020923	Utp11	100	91.700	Peromyscus_maniculatus_bairdii
ENSG00000183520	UTP11	99	60.870	ENSPMAG00000003508	utp11l	99	60.870	Petromyzon_marinus
ENSG00000183520	UTP11	100	79.051	ENSPCIG00000025711	UTP11	100	79.051	Phascolarctos_cinereus
ENSG00000183520	UTP11	89	68.142	ENSPFOG00000002192	utp11l	100	68.142	Poecilia_formosa
ENSG00000183520	UTP11	99	67.331	ENSPLAG00000022603	utp11l	99	67.331	Poecilia_latipinna
ENSG00000183520	UTP11	99	68.526	ENSPMEG00000020873	utp11l	99	68.526	Poecilia_mexicana
ENSG00000183520	UTP11	99	68.526	ENSPMEG00000001976	UTP11	99	68.526	Poecilia_mexicana
ENSG00000183520	UTP11	99	67.729	ENSPREG00000006068	utp11l	99	67.729	Poecilia_reticulata
ENSG00000183520	UTP11	100	99.209	ENSPPYG00000001517	UTP11	100	99.209	Pongo_abelii
ENSG00000183520	UTP11	100	92.490	ENSPCAG00000011257	UTP11	100	92.490	Procavia_capensis
ENSG00000183520	UTP11	100	94.071	ENSPCOG00000019349	UTP11	100	94.071	Propithecus_coquereli
ENSG00000183520	UTP11	99	88.492	ENSPVAG00000001172	UTP11	99	88.492	Pteropus_vampyrus
ENSG00000183520	UTP11	99	68.379	ENSPNYG00000013140	utp11l	99	68.379	Pundamilia_nyererei
ENSG00000183520	UTP11	99	69.323	ENSPNAG00000027810	utp11l	99	69.323	Pygocentrus_nattereri
ENSG00000183520	UTP11	100	90.119	ENSRNOG00000007174	Utp11	100	90.119	Rattus_norvegicus
ENSG00000183520	UTP11	100	99.605	ENSRBIG00000027972	UTP11	100	99.605	Rhinopithecus_bieti
ENSG00000183520	UTP11	100	99.605	ENSRROG00000011983	UTP11	100	99.605	Rhinopithecus_roxellana
ENSG00000183520	UTP11	95	32.016	YKL099C	-	96	32.000	Saccharomyces_cerevisiae
ENSG00000183520	UTP11	100	83.794	ENSSBOG00000028225	-	100	83.794	Saimiri_boliviensis_boliviensis
ENSG00000183520	UTP11	99	84.127	ENSSBOG00000000871	-	93	84.127	Saimiri_boliviensis_boliviensis
ENSG00000183520	UTP11	100	79.842	ENSSHAG00000014730	UTP11	100	79.842	Sarcophilus_harrisii
ENSG00000183520	UTP11	99	67.063	ENSSFOG00015020388	utp11	99	67.063	Scleropages_formosus
ENSG00000183520	UTP11	99	66.403	ENSSMAG00000003346	utp11l	99	66.403	Scophthalmus_maximus
ENSG00000183520	UTP11	99	68.775	ENSSDUG00000010501	utp11l	99	68.775	Seriola_dumerili
ENSG00000183520	UTP11	99	69.565	ENSSLDG00000002990	utp11l	99	69.565	Seriola_lalandi_dorsalis
ENSG00000183520	UTP11	100	94.466	ENSSARG00000014214	UTP11	100	94.466	Sorex_araneus
ENSG00000183520	UTP11	100	71.146	ENSSPUG00000004034	UTP11	100	71.146	Sphenodon_punctatus
ENSG00000183520	UTP11	99	69.170	ENSSPAG00000017221	utp11l	99	69.291	Stegastes_partitus
ENSG00000183520	UTP11	100	93.281	ENSSSCG00000003645	UTP11	100	93.281	Sus_scrofa
ENSG00000183520	UTP11	92	66.810	ENSTGUG00000001453	UTP11	100	66.810	Taeniopygia_guttata
ENSG00000183520	UTP11	99	68.651	ENSTRUG00000009375	utp11l	99	68.651	Takifugu_rubripes
ENSG00000183520	UTP11	99	69.020	ENSTNIG00000006813	utp11l	99	69.020	Tetraodon_nigroviridis
ENSG00000183520	UTP11	83	92.417	ENSTBEG00000008600	UTP11	100	92.417	Tupaia_belangeri
ENSG00000183520	UTP11	100	93.676	ENSTTRG00000013502	UTP11	100	93.676	Tursiops_truncatus
ENSG00000183520	UTP11	100	95.652	ENSUAMG00000006129	UTP11	100	95.652	Ursus_americanus
ENSG00000183520	UTP11	100	95.652	ENSUMAG00000021238	UTP11	100	95.652	Ursus_maritimus
ENSG00000183520	UTP11	100	90.909	ENSVPAG00000004782	UTP11	100	90.909	Vicugna_pacos
ENSG00000183520	UTP11	88	94.619	ENSVVUG00000022895	UTP11	93	94.619	Vulpes_vulpes
ENSG00000183520	UTP11	100	64.822	ENSXETG00000011509	utp11	100	64.822	Xenopus_tropicalis
ENSG00000183520	UTP11	81	72.683	ENSXETG00000023077	-	100	72.683	Xenopus_tropicalis
ENSG00000183520	UTP11	99	66.932	ENSXMAG00000013219	utp11l	99	66.932	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0005515	protein binding	12559088.25416956.	IPI	Function
GO:0005615	extracellular space	11860508.	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	11860508.	IDA	Component
GO:0005737	cytoplasm	11860508.	IDA	Component
GO:0006364	rRNA processing	-	TAS	Process
GO:0007399	nervous system development	12559088.	IMP	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0043065	positive regulation of apoptotic process	12559088.	IMP	Process