EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

Phenotypes

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000184517 (Gene tree)
Gene ID: 162239
Gene Symbol: ZFP1
Alias: FLJ34243|ZNF475
Full Name: ZFP1 zinc finger protein
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 39,728 bases
Position: chr16:75,132,509-75,172,236
Accession: 23328
RBP type: canonical RBP
Summary: This gene belongs to the zinc finger protein family. Some members of this family bind to DNA by zinc-mediated secondary structures called zinc fingers, and are involved in transcriptional regulation. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jan 2016]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	1	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	2	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	3	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	4	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	5	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	6	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	7	8
ENSP00000333192	zf-C2H2	PF00096.26	4.6e-53	8	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	1	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	2	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	3	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	4	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	5	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	6	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	7	8
ENSP00000377080	zf-C2H2	PF00096.26	1.1e-52	8	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	1	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	2	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	3	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	4	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	5	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	6	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	7	8
ENSP00000457044	zf-C2H2	PF00096.26	1.1e-52	8	8
ENSP00000333192	zf-met	PF12874.7	3e-09	1	1
ENSP00000377080	zf-met	PF12874.7	6.5e-09	1	1
ENSP00000457044	zf-met	PF12874.7	6.5e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000332307	ZFP1-201	1502	XM_017022986	ENSP00000333192	374 (aa)	XP_016878475	J3KNQ1
ENST00000564989	ZFP1-205	261	-	-	- (aa)	-	-
ENST00000563356	ZFP1-204	560	-	-	- (aa)	-	-
ENST00000567481	ZFP1-207	493	XM_017022987	ENSP00000455627	76 (aa)	XP_016878476	H3BV40
ENST00000464850	ZFP1-203	3067	XM_024450168	ENSP00000457941	76 (aa)	XP_024305936	H3BV40
ENST00000566105	ZFP1-206	262	-	-	- (aa)	-	-
ENST00000570010	ZFP1-209	1457	XM_017022984	ENSP00000457044	407 (aa)	XP_016878473	Q6P2D0
ENST00000568079	ZFP1-208	1426	XM_017022983	ENSP00000454286	28 (aa)	XP_016878472	H3BM94
ENST00000393430	ZFP1-202	3250	XM_011522921	ENSP00000377080	407 (aa)	XP_011521223	Q6P2D0

Gene Model

Click here to download ENSG00000184517's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa05168	Herpes simplex virus 1 infection	KEGG

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000184517	Gastrointestinal Neoplasms	4.8940000E-005	23504502

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000184517's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000184517	ZFP1	100	92.246	ENSAMEG00000001261	ZFP1	98	92.804	Ailuropoda_melanoleuca
ENSG00000184517	ZFP1	100	97.543	ENSANAG00000028644	ZFP1	100	97.543	Aotus_nancymaae
ENSG00000184517	ZFP1	100	91.200	ENSBTAG00000000868	ZFP1	99	91.832	Bos_taurus
ENSG00000184517	ZFP1	100	97.789	ENSCJAG00000014349	ZFP1	100	97.789	Callithrix_jacchus
ENSG00000184517	ZFP1	100	92.875	ENSCAFG00000020085	ZFP1	100	92.875	Canis_familiaris
ENSG00000184517	ZFP1	100	92.246	ENSCAFG00020001547	ZFP1	98	92.804	Canis_lupus_dingo
ENSG00000184517	ZFP1	100	91.667	ENSCHIG00000015281	ZFP1	100	91.667	Capra_hircus
ENSG00000184517	ZFP1	100	96.069	ENSTSYG00000029077	ZFP1	100	96.069	Carlito_syrichta
ENSG00000184517	ZFP1	99	90.027	ENSCPOG00000000634	ZFP1	99	90.452	Cavia_porcellus
ENSG00000184517	ZFP1	100	97.297	ENSCCAG00000031497	ZFP1	100	97.297	Cebus_capucinus
ENSG00000184517	ZFP1	100	98.771	ENSCATG00000039477	ZFP1	100	98.771	Cercocebus_atys
ENSG00000184517	ZFP1	95	90.756	ENSCLAG00000004223	ZFP1	99	90.756	Chinchilla_lanigera
ENSG00000184517	ZFP1	100	98.128	ENSCSAG00000003718	ZFP1	100	98.034	Chlorocebus_sabaeus
ENSG00000184517	ZFP1	100	83.957	ENSCHOG00000003880	ZFP1	99	84.577	Choloepus_hoffmanni
ENSG00000184517	ZFP1	100	99.017	ENSCANG00000038483	ZFP1	100	99.017	Colobus_angolensis_palliatus
ENSG00000184517	ZFP1	99	90.296	ENSCGRG00001010967	Zfp1	99	90.750	Cricetulus_griseus_chok1gshd
ENSG00000184517	ZFP1	99	90.099	ENSCGRG00000016788	-	100	90.099	Cricetulus_griseus_crigri
ENSG00000184517	ZFP1	94	87.784	ENSDNOG00000010525	-	100	87.784	Dasypus_novemcinctus
ENSG00000184517	ZFP1	97	92.244	ENSDNOG00000006405	-	100	92.244	Dasypus_novemcinctus
ENSG00000184517	ZFP1	100	85.294	ENSDORG00000011934	Zfp1	99	85.821	Dipodomys_ordii
ENSG00000184517	ZFP1	100	92.246	ENSEASG00005013460	ZFP1	98	92.804	Equus_asinus_asinus
ENSG00000184517	ZFP1	100	92.246	ENSECAG00000014727	ZFP1	98	92.804	Equus_caballus
ENSG00000184517	ZFP1	100	92.383	ENSFCAG00000024047	ZFP1	100	92.383	Felis_catus
ENSG00000184517	ZFP1	100	99.509	ENSGGOG00000006121	ZFP1	100	99.509	Gorilla_gorilla
ENSG00000184517	ZFP1	99	92.473	ENSHGLG00000016406	-	99	92.982	Heterocephalus_glaber_female
ENSG00000184517	ZFP1	100	91.375	ENSHGLG00100004688	-	99	91.960	Heterocephalus_glaber_male
ENSG00000184517	ZFP1	99	93.801	ENSSTOG00000022317	ZFP1	100	93.801	Ictidomys_tridecemlineatus
ENSG00000184517	ZFP1	100	88.649	ENSJJAG00000019878	Zfp1	99	88.918	Jaculus_jaculus
ENSG00000184517	ZFP1	100	91.892	ENSLAFG00000003125	ZFP1	100	92.481	Loxodonta_africana
ENSG00000184517	ZFP1	100	98.526	ENSMFAG00000001812	ZFP1	100	98.526	Macaca_fascicularis
ENSG00000184517	ZFP1	100	98.526	ENSMMUG00000011587	ZFP1	100	98.526	Macaca_mulatta
ENSG00000184517	ZFP1	100	98.526	ENSMNEG00000041941	ZFP1	100	98.526	Macaca_nemestrina
ENSG00000184517	ZFP1	100	98.771	ENSMLEG00000021950	ZFP1	100	98.771	Mandrillus_leucophaeus
ENSG00000184517	ZFP1	99	87.601	ENSMAUG00000007745	Zfp1	99	88.471	Mesocricetus_auratus
ENSG00000184517	ZFP1	100	93.612	ENSMICG00000015124	ZFP1	99	93.612	Microcebus_murinus
ENSG00000184517	ZFP1	100	86.523	ENSMOCG00000002761	Zfp1	100	87.250	Microtus_ochrogaster
ENSG00000184517	ZFP1	100	86.386	MGP_CAROLIEiJ_G0031579	Zfp1	100	86.386	Mus_caroli
ENSG00000184517	ZFP1	100	86.386	ENSMUSG00000055835	Zfp1	100	86.386	Mus_musculus
ENSG00000184517	ZFP1	100	86.139	MGP_PahariEiJ_G0023178	Zfp1	100	86.139	Mus_pahari
ENSG00000184517	ZFP1	100	86.386	MGP_SPRETEiJ_G0032697	Zfp1	100	86.386	Mus_spretus
ENSG00000184517	ZFP1	99	91.379	ENSMPUG00000009946	ZFP1	99	91.379	Mustela_putorius_furo
ENSG00000184517	ZFP1	100	90.107	ENSMLUG00000002042	ZFP1	99	90.571	Myotis_lucifugus
ENSG00000184517	ZFP1	99	91.542	ENSNGAG00000016319	Zfp1	98	91.542	Nannospalax_galili
ENSG00000184517	ZFP1	100	99.017	ENSNLEG00000013001	ZFP1	100	99.017	Nomascus_leucogenys
ENSG00000184517	ZFP1	100	85.012	ENSOPRG00000006123	ZFP1	100	85.012	Ochotona_princeps
ENSG00000184517	ZFP1	100	91.444	ENSODEG00000014404	ZFP1	100	91.549	Octodon_degus
ENSG00000184517	ZFP1	100	87.701	ENSOCUG00000001924	ZFP1	100	88.308	Oryctolagus_cuniculus
ENSG00000184517	ZFP1	99	94.370	ENSOGAG00000001902	ZFP1	99	93.399	Otolemur_garnettii
ENSG00000184517	ZFP1	100	91.422	ENSOARG00000006461	ZFP1	100	91.422	Ovis_aries
ENSG00000184517	ZFP1	100	99.509	ENSPPAG00000033168	ZFP1	100	99.509	Pan_paniscus
ENSG00000184517	ZFP1	100	92.629	ENSPPRG00000007804	ZFP1	100	92.629	Panthera_pardus
ENSG00000184517	ZFP1	100	92.138	ENSPTIG00000009843	ZFP1	100	92.138	Panthera_tigris_altaica
ENSG00000184517	ZFP1	100	100.000	ENSPTRG00000008354	ZFP1	100	100.000	Pan_troglodytes
ENSG00000184517	ZFP1	100	99.017	ENSPANG00000016568	ZFP1	100	99.017	Papio_anubis
ENSG00000184517	ZFP1	100	99.263	ENSPPYG00000007556	ZFP1	100	99.263	Pongo_abelii
ENSG00000184517	ZFP1	100	90.909	ENSPCAG00000007561	ZFP1	99	91.542	Procavia_capensis
ENSG00000184517	ZFP1	100	93.583	ENSPCOG00000023041	ZFP1	100	93.583	Propithecus_coquereli
ENSG00000184517	ZFP1	99	85.714	ENSRNOG00000019059	Zfp1	99	86.500	Rattus_norvegicus
ENSG00000184517	ZFP1	100	99.017	ENSRBIG00000039257	ZFP1	100	99.017	Rhinopithecus_bieti
ENSG00000184517	ZFP1	100	99.017	ENSRROG00000042823	ZFP1	100	99.017	Rhinopithecus_roxellana
ENSG00000184517	ZFP1	100	97.297	ENSSBOG00000020206	ZFP1	100	97.297	Saimiri_boliviensis_boliviensis
ENSG00000184517	ZFP1	100	90.133	ENSSARG00000013922	ZFP1	99	90.347	Sorex_araneus
ENSG00000184517	ZFP1	100	91.912	ENSSSCG00000022668	ZFP1	100	91.912	Sus_scrofa
ENSG00000184517	ZFP1	96	92.778	ENSTBEG00000011217	ZFP1	100	92.778	Tupaia_belangeri
ENSG00000184517	ZFP1	100	92.513	ENSTTRG00000008949	ZFP1	99	93.035	Tursiops_truncatus
ENSG00000184517	ZFP1	100	91.444	ENSUAMG00000017632	ZFP1	99	92.060	Ursus_americanus
ENSG00000184517	ZFP1	100	91.444	ENSUMAG00000014322	ZFP1	99	92.060	Ursus_maritimus
ENSG00000184517	ZFP1	96	91.365	ENSVPAG00000012526	ZFP1	99	91.365	Vicugna_pacos
ENSG00000184517	ZFP1	100	92.513	ENSVVUG00000024277	ZFP1	98	93.052	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function