EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000186288 (Gene tree)
Gene ID
340529
Gene Symbol
PABPC1L2A
Alias
RBM32A
Full Name
poly(A) binding protein cytoplasmic 1 like 2A
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
2,237 bases
Position
chrX:73,077,276-73,079,512
Accession
27989
RBP type
canonical RBP
Summary
(Poly(A) Binding Protein Cytoplasmic 1 Like 2A) is a Protein Coding gene. Among its related pathways are mRNA surveillance pathway and RNA transport. Gene Ontology (GO) annotations related to this gene include nucleic acid binding and nucleotide binding. An important paralog of this gene is PABPC1L2B.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000362618RRM_1PF00076.221.1e-4112
ENSP00000362618RRM_1PF00076.221.1e-4122
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000373519PABPC1L2A-2012237-ENSP00000362618200 (aa)-Q5JQF8
Gene Model
Click here to download ENSG00000186288's gene model file
Pathways
Pathway IDPathway NameSource
hsa03013RNA transportKEGG
hsa03015mRNA surveillance pathwayKEGG
hsa03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000186288's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000186288PABPC1L2A8044.444ENSG00000131051RBM396444.444
ENSG00000186288PABPC1L2A9730.808ENSG00000116001TIA19732.450
ENSG00000186288PABPC1L2A9863.265ENSG00000254535PABPC4L9863.265
ENSG00000186288PABPC1L2A8034.211ENSG00000107105ELAVL27934.211
ENSG00000186288PABPC1L2A100100.000ENSG00000184388PABPC1L2B100100.000
ENSG00000186288PABPC1L2A7933.333ENSG00000151923TIAL19134.167
ENSG00000186288PABPC1L2A9034.615ENSG00000143368SF3B47834.615
ENSG00000186288PABPC1L2A9859.375ENSG00000174740PABPC59359.694
ENSG00000186288PABPC1L2A9873.333ENSG00000151846PABPC35873.333
ENSG00000186288PABPC1L2A9976.650ENSG00000090621PABPC49386.667
ENSG00000186288PABPC1L2A9971.066ENSG00000101104PABPC1L9571.066
ENSG00000186288PABPC1L2A8044.444ENSG00000100461RBM235844.444
ENSG00000186288PABPC1L2A9432.258ENSG00000066044ELAVL18132.258
ENSG00000186288PABPC1L2A9880.102ENSG00000070756PABPC19988.333
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000186288PABPC1L2A9880.102ENSAPOG00000015105pabpc1a5880.102Acanthochromis_polyacanthus
ENSG00000186288PABPC1L2A9879.592ENSAPOG00000017776pabpc1b6079.592Acanthochromis_polyacanthus
ENSG00000186288PABPC1L2A10099.500ENSAMEG00000019441-10099.500Ailuropoda_melanoleuca
ENSG00000186288PABPC1L2A9880.102ENSACIG00000004685pabpc1a5880.102Amphilophus_citrinellus
ENSG00000186288PABPC1L2A9878.571ENSACIG00000018366pabpc1b5978.571Amphilophus_citrinellus
ENSG00000186288PABPC1L2A9880.102ENSAOCG00000019839pabpc1b5880.102Amphiprion_ocellaris
ENSG00000186288PABPC1L2A9880.102ENSAOCG00000011656pabpc1a5880.102Amphiprion_ocellaris
ENSG00000186288PABPC1L2A9880.102ENSAPEG00000006963pabpc1a5880.102Amphiprion_percula
ENSG00000186288PABPC1L2A9880.102ENSAPEG00000010435pabpc1b5880.102Amphiprion_percula
ENSG00000186288PABPC1L2A9879.082ENSATEG00000012917pabpc1b5879.082Anabas_testudineus
ENSG00000186288PABPC1L2A9880.102ENSATEG00000024852pabpc1a5880.102Anabas_testudineus
ENSG00000186288PABPC1L2A100100.000ENSANAG00000019431-100100.000Aotus_nancymaae
ENSG00000186288PABPC1L2A100100.000ENSANAG00000019429-100100.000Aotus_nancymaae
ENSG00000186288PABPC1L2A9880.102ENSACLG00000009399pabpc1a6878.889Astatotilapia_calliptera
ENSG00000186288PABPC1L2A9878.061ENSACLG00000014335pabpc1b5878.061Astatotilapia_calliptera
ENSG00000186288PABPC1L2A9879.592ENSAMXG00000008599pabpc1b5879.592Astyanax_mexicanus
ENSG00000186288PABPC1L2A10099.000ENSBTAG00000052491-9499.000Bos_taurus
ENSG00000186288PABPC1L2A10098.500ENSBTAG00000050902-9598.500Bos_taurus
ENSG00000186288PABPC1L2A100100.000ENSCJAG00000041326-100100.000Callithrix_jacchus
ENSG00000186288PABPC1L2A10099.500ENSCAFG00020002052-9699.500Canis_lupus_dingo
ENSG00000186288PABPC1L2A10099.000ENSCHIG00000006283-10099.000Capra_hircus
ENSG00000186288PABPC1L2A10099.500ENSCHIG00000011138-10099.500Capra_hircus
ENSG00000186288PABPC1L2A10099.500ENSTSYG00000001775-10099.500Carlito_syrichta
ENSG00000186288PABPC1L2A10099.000ENSCPOG00000009525-10099.000Cavia_porcellus
ENSG00000186288PABPC1L2A100100.000ENSCCAG00000031524-100100.000Cebus_capucinus
ENSG00000186288PABPC1L2A100100.000ENSCATG00000042826-100100.000Cercocebus_atys
ENSG00000186288PABPC1L2A100100.000ENSCATG00000043125-100100.000Cercocebus_atys
ENSG00000186288PABPC1L2A10095.500ENSCLAG00000017412-10095.500Chinchilla_lanigera
ENSG00000186288PABPC1L2A10095.500ENSCLAG00000017409-10095.500Chinchilla_lanigera
ENSG00000186288PABPC1L2A100100.000ENSCSAG00000000102-100100.000Chlorocebus_sabaeus
ENSG00000186288PABPC1L2A9992.462ENSCGRG00001023387-9892.462Cricetulus_griseus_chok1gshd
ENSG00000186288PABPC1L2A9880.102ENSCSEG00000013324pabpc1a5880.102Cynoglossus_semilaevis
ENSG00000186288PABPC1L2A9879.082ENSCSEG00000015241-5879.082Cynoglossus_semilaevis
ENSG00000186288PABPC1L2A9879.592ENSCVAG00000005489pabpc1b5879.592Cyprinodon_variegatus
ENSG00000186288PABPC1L2A9880.102ENSCVAG00000021872pabpc1a5880.102Cyprinodon_variegatus
ENSG00000186288PABPC1L2A9879.592ENSDARG00000017219pabpc1a5879.592Danio_rerio
ENSG00000186288PABPC1L2A9879.082ENSDARG00000021140pabpc1b9286.885Danio_rerio
ENSG00000186288PABPC1L2A10097.000ENSDNOG00000030926-10097.000Dasypus_novemcinctus
ENSG00000186288PABPC1L2A10096.500ENSDORG00000011362-10096.500Dipodomys_ordii
ENSG00000186288PABPC1L2A10099.000ENSEASG00005010399-9599.000Equus_asinus_asinus
ENSG00000186288PABPC1L2A10099.000ENSECAG00000002620-9599.000Equus_caballus
ENSG00000186288PABPC1L2A10094.500ENSEEUG00000008203-10094.500Erinaceus_europaeus
ENSG00000186288PABPC1L2A9879.592ENSELUG00000003614pabpc1a5879.592Esox_lucius
ENSG00000186288PABPC1L2A9880.102ENSELUG00000015062-5880.102Esox_lucius
ENSG00000186288PABPC1L2A9355.615ENSELUG00000005389-7855.615Esox_lucius
ENSG00000186288PABPC1L2A10099.500ENSFCAG00000039701-10099.500Felis_catus
ENSG00000186288PABPC1L2A10099.000ENSFDAG00000005484-10099.000Fukomys_damarensis
ENSG00000186288PABPC1L2A9880.102ENSFHEG00000018979pabpc1a5880.102Fundulus_heteroclitus
ENSG00000186288PABPC1L2A9879.082ENSFHEG00000008186pabpc1b5879.082Fundulus_heteroclitus
ENSG00000186288PABPC1L2A9879.592ENSGMOG00000002448-5779.592Gadus_morhua
ENSG00000186288PABPC1L2A9879.592ENSGMOG00000013448pabpc1a5779.592Gadus_morhua
ENSG00000186288PABPC1L2A9879.592ENSGAFG00000010193pabpc1b6079.592Gambusia_affinis
ENSG00000186288PABPC1L2A9880.102ENSGAFG00000019750pabpc1a6180.102Gambusia_affinis
ENSG00000186288PABPC1L2A9880.612ENSGACG00000003771pabpc1b6480.612Gasterosteus_aculeatus
ENSG00000186288PABPC1L2A9880.102ENSGACG00000003572pabpc1a5880.102Gasterosteus_aculeatus
ENSG00000186288PABPC1L2A100100.000ENSGGOG00000043933-100100.000Gorilla_gorilla
ENSG00000186288PABPC1L2A100100.000ENSGGOG00000038606-100100.000Gorilla_gorilla
ENSG00000186288PABPC1L2A9880.102ENSHBUG00000020487pabpc1a6878.889Haplochromis_burtoni
ENSG00000186288PABPC1L2A9878.061ENSHBUG00000002075pabpc1b6078.061Haplochromis_burtoni
ENSG00000186288PABPC1L2A10097.000ENSHGLG00000019668-10097.000Heterocephalus_glaber_female
ENSG00000186288PABPC1L2A10097.000ENSHGLG00000019762-10097.000Heterocephalus_glaber_female
ENSG00000186288PABPC1L2A10097.000ENSHGLG00100020854-10097.000Heterocephalus_glaber_male
ENSG00000186288PABPC1L2A9568.783ENSHCOG00000003175pabpc1b6967.500Hippocampus_comes
ENSG00000186288PABPC1L2A9880.102ENSHCOG00000013502pabpc1a5880.102Hippocampus_comes
ENSG00000186288PABPC1L2A9860.309ENSIPUG00000021244-5260.309Ictalurus_punctatus
ENSG00000186288PABPC1L2A9879.592ENSIPUG00000008848pabpc1a5979.592Ictalurus_punctatus
ENSG00000186288PABPC1L2A9879.592ENSIPUG00000010791-6179.592Ictalurus_punctatus
ENSG00000186288PABPC1L2A10098.500ENSSTOG00000026028-10098.500Ictidomys_tridecemlineatus
ENSG00000186288PABPC1L2A10098.500ENSSTOG00000022096-10098.500Ictidomys_tridecemlineatus
ENSG00000186288PABPC1L2A10097.000ENSJJAG00000007037-10097.000Jaculus_jaculus
ENSG00000186288PABPC1L2A9880.102ENSKMAG00000000605pabpc1a5880.102Kryptolebias_marmoratus
ENSG00000186288PABPC1L2A9879.082ENSKMAG00000008049pabpc1b6379.082Kryptolebias_marmoratus
ENSG00000186288PABPC1L2A9880.102ENSLBEG00000026845pabpc1b5880.102Labrus_bergylta
ENSG00000186288PABPC1L2A9880.102ENSLBEG00000024002-5880.102Labrus_bergylta
ENSG00000186288PABPC1L2A9997.990ENSLAFG00000023096-9997.990Loxodonta_africana
ENSG00000186288PABPC1L2A10099.502ENSMFAG00000028878-10099.502Macaca_fascicularis
ENSG00000186288PABPC1L2A100100.000ENSMMUG00000039929-100100.000Macaca_mulatta
ENSG00000186288PABPC1L2A100100.000ENSMMUG00000037681-100100.000Macaca_mulatta
ENSG00000186288PABPC1L2A100100.000ENSMMUG00000009740-100100.000Macaca_mulatta
ENSG00000186288PABPC1L2A100100.000ENSMNEG00000037732-100100.000Macaca_nemestrina
ENSG00000186288PABPC1L2A100100.000ENSMLEG00000027495-100100.000Mandrillus_leucophaeus
ENSG00000186288PABPC1L2A9880.102ENSMAMG00000004502-6878.889Mastacembelus_armatus
ENSG00000186288PABPC1L2A9879.082ENSMAMG00000014610pabpc1b5979.082Mastacembelus_armatus
ENSG00000186288PABPC1L2A9880.102ENSMZEG00005025416pabpc1a6878.889Maylandia_zebra
ENSG00000186288PABPC1L2A9878.061ENSMZEG00005026745pabpc1b5878.061Maylandia_zebra
ENSG00000186288PABPC1L2A10099.000ENSMICG00000047642-10099.000Microcebus_murinus
ENSG00000186288PABPC1L2A9880.102ENSMMOG00000018009pabpc1b6280.102Mola_mola
ENSG00000186288PABPC1L2A9880.102ENSMMOG00000018044pabpc1a6878.889Mola_mola
ENSG00000186288PABPC1L2A9867.179ENSMODG00000015024-5767.179Monodelphis_domestica
ENSG00000186288PABPC1L2A9873.980ENSMODG00000013156-5873.980Monodelphis_domestica
ENSG00000186288PABPC1L2A9879.082ENSMALG00000006066pabpc1b6379.082Monopterus_albus
ENSG00000186288PABPC1L2A9880.102ENSMALG00000013020-6280.102Monopterus_albus
ENSG00000186288PABPC1L2A10096.500ENSNGAG00000012688-10096.500Nannospalax_galili
ENSG00000186288PABPC1L2A9880.102ENSNBRG00000003068-6878.889Neolamprologus_brichardi
ENSG00000186288PABPC1L2A9878.061ENSNBRG00000013737pabpc1b6278.061Neolamprologus_brichardi
ENSG00000186288PABPC1L2A100100.000ENSNLEG00000018128-100100.000Nomascus_leucogenys
ENSG00000186288PABPC1L2A10097.500ENSODEG00000018540-10097.500Octodon_degus
ENSG00000186288PABPC1L2A9878.061ENSONIG00000002717pabpc1b5878.061Oreochromis_niloticus
ENSG00000186288PABPC1L2A9880.102ENSONIG00000006871-5880.102Oreochromis_niloticus
ENSG00000186288PABPC1L2A10099.500ENSOCUG00000002565-10099.500Oryctolagus_cuniculus
ENSG00000186288PABPC1L2A9880.102ENSORLG00000002691pabpc1a6878.889Oryzias_latipes
ENSG00000186288PABPC1L2A9877.041ENSORLG00000003008-5877.041Oryzias_latipes
ENSG00000186288PABPC1L2A9877.041ENSORLG00020022259-5877.041Oryzias_latipes_hni
ENSG00000186288PABPC1L2A9880.102ENSORLG00020022398pabpc1a5880.102Oryzias_latipes_hni
ENSG00000186288PABPC1L2A9877.041ENSORLG00015010932-5877.041Oryzias_latipes_hsok
ENSG00000186288PABPC1L2A9880.102ENSORLG00015013633pabpc15880.102Oryzias_latipes_hsok
ENSG00000186288PABPC1L2A9880.102ENSOMEG00000020219pabpc1a5880.102Oryzias_melastigma
ENSG00000186288PABPC1L2A9876.667ENSOMEG00000013627pabpc1b6776.667Oryzias_melastigma
ENSG00000186288PABPC1L2A10099.000ENSOGAG00000026047-10099.000Otolemur_garnettii
ENSG00000186288PABPC1L2A10099.000ENSOGAG00000029513-10099.000Otolemur_garnettii
ENSG00000186288PABPC1L2A10099.000ENSOARG00000005943-10099.000Ovis_aries
ENSG00000186288PABPC1L2A100100.000ENSPPAG00000012920-100100.000Pan_paniscus
ENSG00000186288PABPC1L2A10099.500ENSPPRG00000011804-10099.500Panthera_pardus
ENSG00000186288PABPC1L2A10099.500ENSPPRG00000011809-10099.500Panthera_pardus
ENSG00000186288PABPC1L2A100100.000ENSPTRG00000028252-100100.000Pan_troglodytes
ENSG00000186288PABPC1L2A100100.000ENSPANG00000011549-100100.000Papio_anubis
ENSG00000186288PABPC1L2A9879.592ENSPKIG00000005676pabpc1b5879.592Paramormyrops_kingsleyae
ENSG00000186288PABPC1L2A9879.082ENSPMGG00000022487pabpc1a7679.082Periophthalmus_magnuspinnatus
ENSG00000186288PABPC1L2A9879.592ENSPMGG00000023134-7979.592Periophthalmus_magnuspinnatus
ENSG00000186288PABPC1L2A9879.082ENSPFOG00000005917pabpc1b5879.082Poecilia_formosa
ENSG00000186288PABPC1L2A9880.102ENSPFOG00000010815pabpc1a5780.102Poecilia_formosa
ENSG00000186288PABPC1L2A9879.592ENSPLAG00000001388pabpc1b5879.592Poecilia_latipinna
ENSG00000186288PABPC1L2A9880.102ENSPLAG00000004114pabpc1a5880.102Poecilia_latipinna
ENSG00000186288PABPC1L2A9880.102ENSPMEG00000001334pabpc1a5880.102Poecilia_mexicana
ENSG00000186288PABPC1L2A9879.082ENSPMEG00000014399pabpc1b5879.082Poecilia_mexicana
ENSG00000186288PABPC1L2A9880.102ENSPREG00000019595pabpc1a9286.885Poecilia_reticulata
ENSG00000186288PABPC1L2A9879.592ENSPREG00000010911pabpc1b6079.592Poecilia_reticulata
ENSG00000186288PABPC1L2A100100.000ENSPPYG00000020468-100100.000Pongo_abelii
ENSG00000186288PABPC1L2A10098.500ENSPCAG00000005308-10098.500Procavia_capensis
ENSG00000186288PABPC1L2A10098.500ENSPCOG00000026349-10098.500Propithecus_coquereli
ENSG00000186288PABPC1L2A10095.500ENSPVAG00000016117-10095.500Pteropus_vampyrus
ENSG00000186288PABPC1L2A9878.061ENSPNYG00000012578pabpc1b6078.061Pundamilia_nyererei
ENSG00000186288PABPC1L2A9880.102ENSPNYG00000005192pabpc1a6178.889Pundamilia_nyererei
ENSG00000186288PABPC1L2A9880.102ENSPNAG00000024626pabpc1b5880.102Pygocentrus_nattereri
ENSG00000186288PABPC1L2A9878.571ENSPNAG00000028408pabpc1a6478.571Pygocentrus_nattereri
ENSG00000186288PABPC1L2A100100.000ENSRBIG00000027173-100100.000Rhinopithecus_bieti
ENSG00000186288PABPC1L2A9978.680ENSRBIG00000028738-6978.680Rhinopithecus_bieti
ENSG00000186288PABPC1L2A100100.000ENSRROG00000017404-100100.000Rhinopithecus_roxellana
ENSG00000186288PABPC1L2A9869.388ENSSHAG00000000511-5969.388Sarcophilus_harrisii
ENSG00000186288PABPC1L2A9880.102ENSSFOG00015006662pabpc1a5880.102Scleropages_formosus
ENSG00000186288PABPC1L2A9880.102ENSSFOG00015002752-5880.102Scleropages_formosus
ENSG00000186288PABPC1L2A8768.966ENSSFOG00015019668-6768.966Scleropages_formosus
ENSG00000186288PABPC1L2A9880.102ENSSMAG00000010803pabpc1a5880.102Scophthalmus_maximus
ENSG00000186288PABPC1L2A9879.082ENSSMAG00000006869pabpc1b5879.082Scophthalmus_maximus
ENSG00000186288PABPC1L2A9880.102ENSSDUG00000006675pabpc1a5880.102Seriola_dumerili
ENSG00000186288PABPC1L2A9879.592ENSSDUG00000011965pabpc1b5879.592Seriola_dumerili
ENSG00000186288PABPC1L2A9879.592ENSSLDG00000014156pabpc1b5879.592Seriola_lalandi_dorsalis
ENSG00000186288PABPC1L2A9880.102ENSSLDG00000011661pabpc1a5880.102Seriola_lalandi_dorsalis
ENSG00000186288PABPC1L2A9879.592ENSSPAG00000019265pabpc1b6379.592Stegastes_partitus
ENSG00000186288PABPC1L2A9880.102ENSSPAG00000014453-5880.102Stegastes_partitus
ENSG00000186288PABPC1L2A10099.500ENSSSCG00000036336-10099.500Sus_scrofa
ENSG00000186288PABPC1L2A10099.500ENSSSCG00000032167-10099.500Sus_scrofa
ENSG00000186288PABPC1L2A9880.102ENSTRUG00000011577-5880.102Takifugu_rubripes
ENSG00000186288PABPC1L2A9880.102ENSTRUG00000003767-5980.102Takifugu_rubripes
ENSG00000186288PABPC1L2A9875.743ENSTNIG00000013307pabpc1a5875.743Tetraodon_nigroviridis
ENSG00000186288PABPC1L2A9880.612ENSTNIG00000009153pabpc1b5880.612Tetraodon_nigroviridis
ENSG00000186288PABPC1L2A10099.500ENSTTRG00000013181-10099.500Tursiops_truncatus
ENSG00000186288PABPC1L2A10099.500ENSUAMG00000008089-10099.500Ursus_americanus
ENSG00000186288PABPC1L2A9957.868ENSUMAG00000023926-8857.360Ursus_maritimus
ENSG00000186288PABPC1L2A10099.500ENSUMAG00000003364-10099.500Ursus_maritimus
ENSG00000186288PABPC1L2A10099.000ENSVVUG00000015892-9799.000Vulpes_vulpes
ENSG00000186288PABPC1L2A9880.102ENSXCOG00000017066pabpc1a6180.102Xiphophorus_couchianus
ENSG00000186288PABPC1L2A9879.592ENSXCOG00000019901pabpc1b6079.592Xiphophorus_couchianus
ENSG00000186288PABPC1L2A9880.102ENSXMAG00000002555pabpc1a6080.102Xiphophorus_maculatus
ENSG00000186288PABPC1L2A9879.592ENSXMAG00000003753pabpc1b8979.592Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding21873635.IBAFunction
GO:0003730mRNA 3'-UTR binding21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005829cytosol21873635.IBAComponent
GO:0008143poly(A) binding21873635.IBAFunction
GO:0008266poly(U) RNA binding21873635.IBAFunction
GO:0010494cytoplasmic stress granule21873635.IBAComponent
GO:0070062extracellular exosome23533145.HDAComponent
GO:1990904ribonucleoprotein complex21873635.IBAComponent

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