EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000188976 (Gene tree)
Gene ID
26155
Gene Symbol
NOC2L
Alias
DKFZP564C186|NET7|NET15|NIR|PPP1R112
Full Name
NOC2 like nucleolar associated transcriptional repressor
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
15,107 bases
Position
chr1:944,203-959,309
Accession
24517
RBP type
canonical RBP
Summary
Histone modification by histone acetyltransferases (HAT) and histone deacetylases (HDAC) can control major aspects of transcriptional regulation. NOC2L represents a novel HDAC-independent inhibitor of histone acetyltransferase (INHAT) (Hublitz et al., 2005 [PubMed 16322561]).[supplied by OMIM, Mar 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000317992Noc2PF03715.133.7e-11911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
22363708Transcriptional repressor NIR functions in the ribosome RNA processing of both 40S and 60S subunits.PLoS One2012Wu Jdoi: 10.1371/journal.pone.0031692
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000487214NOC2L-205865--- (aa)--
ENST00000469563NOC2L-202878--- (aa)--
ENST00000483767NOC2L-2041611--- (aa)--
ENST00000477976NOC2L-2034201--- (aa)--
ENST00000327044NOC2L-2012790-ENSP00000317992749 (aa)-Q9Y3T9
ENST00000496938NOC2L-206149--- (aa)--
Gene Model
Click here to download ENSG00000188976's gene model file
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000188976's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000188976NOC2L9956.789ENSAPOG00000019587noc2l9955.698Acanthochromis_polyacanthus
ENSG00000188976NOC2L10078.667ENSAMEG00000016516NOC2L10078.667Ailuropoda_melanoleuca
ENSG00000188976NOC2L9954.011ENSACIG00000004084noc2l9059.027Amphilophus_citrinellus
ENSG00000188976NOC2L9159.590ENSAOCG00000019674noc2l9559.448Amphiprion_ocellaris
ENSG00000188976NOC2L9953.083ENSAPEG00000021569noc2l9955.428Amphiprion_percula
ENSG00000188976NOC2L9957.050ENSATEG00000018407noc2l9957.143Anabas_testudineus
ENSG00000188976NOC2L8465.719ENSAPLG00000008755NOC2L9464.969Anas_platyrhynchos
ENSG00000188976NOC2L8262.319ENSACAG00000008492NOC2L9962.036Anolis_carolinensis
ENSG00000188976NOC2L7089.847ENSANAG00000029524NOC2L7789.847Aotus_nancymaae
ENSG00000188976NOC2L8660.000ENSACLG00000026116noc2l9956.653Astatotilapia_calliptera
ENSG00000188976NOC2L9955.046ENSAMXG00000012865noc2l9955.046Astyanax_mexicanus
ENSG00000188976NOC2L10078.723ENSBTAG00000016528NOC2L10078.191Bos_taurus
ENSG00000188976NOC2L10090.133ENSCJAG00000011380NOC2L10090.667Callithrix_jacchus
ENSG00000188976NOC2L10076.671ENSCAFG00000019369NOC2L10076.610Canis_familiaris
ENSG00000188976NOC2L10076.812ENSCAFG00020011712NOC2L10076.680Canis_lupus_dingo
ENSG00000188976NOC2L10078.249ENSCHIG00000017187NOC2L10078.117Capra_hircus
ENSG00000188976NOC2L9280.523ENSTSYG00000032696NOC2L10080.523Carlito_syrichta
ENSG00000188976NOC2L7867.851ENSCAPG00000006877NOC2L10068.020Cavia_aperea
ENSG00000188976NOC2L10076.285ENSCPOG00000007964NOC2L10076.153Cavia_porcellus
ENSG00000188976NOC2L10090.426ENSCCAG00000035002NOC2L10090.293Cebus_capucinus
ENSG00000188976NOC2L9292.374ENSCATG00000034591NOC2L9992.086Cercocebus_atys
ENSG00000188976NOC2L10076.852ENSCLAG00000010210NOC2L10076.455Chinchilla_lanigera
ENSG00000188976NOC2L10091.931ENSCSAG00000000664NOC2L10091.667Chlorocebus_sabaeus
ENSG00000188976NOC2L9960.052ENSCPBG00000022124NOC2L9960.000Chrysemys_picta_bellii
ENSG00000188976NOC2L9141.159ENSCING00000005419-9041.449Ciona_intestinalis
ENSG00000188976NOC2L9293.759ENSCANG00000034286NOC2L10093.759Colobus_angolensis_palliatus
ENSG00000188976NOC2L10076.494ENSCGRG00001012249Noc2l10075.931Cricetulus_griseus_chok1gshd
ENSG00000188976NOC2L8078.559ENSCGRG00000002320Noc2l10078.559Cricetulus_griseus_crigri
ENSG00000188976NOC2L9955.979ENSCSEG00000006426noc2l9956.693Cynoglossus_semilaevis
ENSG00000188976NOC2L8960.896ENSCVAG00000006633noc2l9160.117Cyprinodon_variegatus
ENSG00000188976NOC2L9955.395ENSDARG00000001754noc2l9962.366Danio_rerio
ENSG00000188976NOC2L10078.013ENSDNOG00000039671NOC2L9377.895Dasypus_novemcinctus
ENSG00000188976NOC2L9975.234ENSDORG00000013746Noc2l10078.392Dipodomys_ordii
ENSG00000188976NOC2L8335.988FBgn0032925CG92468336.364Drosophila_melanogaster
ENSG00000188976NOC2L7070.968ENSETEG00000010778-6177.143Echinops_telfairi
ENSG00000188976NOC2L9945.076ENSEBUG00000006083noc2l9945.732Eptatretus_burgeri
ENSG00000188976NOC2L9979.088ENSEASG00005015108NOC2L8679.017Equus_asinus_asinus
ENSG00000188976NOC2L9978.877ENSECAG00000023976NOC2L8779.073Equus_caballus
ENSG00000188976NOC2L9764.883ENSEEUG00000013339NOC2L10064.507Erinaceus_europaeus
ENSG00000188976NOC2L8959.851ENSELUG00000008668noc2l10058.197Esox_lucius
ENSG00000188976NOC2L9878.032ENSFCAG00000003356NOC2L10077.881Felis_catus
ENSG00000188976NOC2L8064.573ENSFALG00000007392NOC2L10064.573Ficedula_albicollis
ENSG00000188976NOC2L9976.892ENSFDAG00000017623NOC2L9977.025Fukomys_damarensis
ENSG00000188976NOC2L9957.987ENSFHEG00000005783noc2l9957.839Fundulus_heteroclitus
ENSG00000188976NOC2L9952.603ENSGMOG00000000675noc2l9952.005Gadus_morhua
ENSG00000188976NOC2L10059.974ENSGALG00000002222NOC2L10060.536Gallus_gallus
ENSG00000188976NOC2L9956.860ENSGAFG00000000312noc2l9956.954Gambusia_affinis
ENSG00000188976NOC2L9956.839ENSGACG00000007367noc2l9956.764Gasterosteus_aculeatus
ENSG00000188976NOC2L9960.441ENSGAGG00000011477NOC2L9960.571Gopherus_agassizii
ENSG00000188976NOC2L8093.467ENSGGOG00000025539-10093.467Gorilla_gorilla
ENSG00000188976NOC2L10097.730ENSGGOG00000007732NOC2L10097.730Gorilla_gorilla
ENSG00000188976NOC2L8660.000ENSHBUG00000021479noc2l9956.653Haplochromis_burtoni
ENSG00000188976NOC2L10075.862ENSHGLG00000006852NOC2L10075.862Heterocephalus_glaber_female
ENSG00000188976NOC2L10075.862ENSHGLG00100008514NOC2L10075.862Heterocephalus_glaber_male
ENSG00000188976NOC2L9953.977ENSHCOG00000005732noc2l9954.581Hippocampus_comes
ENSG00000188976NOC2L9956.771ENSIPUG00000020920noc2l9956.088Ictalurus_punctatus
ENSG00000188976NOC2L9080.386ENSSTOG00000009911NOC2L10080.090Ictidomys_tridecemlineatus
ENSG00000188976NOC2L10076.517ENSJJAG00000022658Noc2l10076.486Jaculus_jaculus
ENSG00000188976NOC2L9956.356ENSKMAG00000016552noc2l9955.917Kryptolebias_marmoratus
ENSG00000188976NOC2L9957.087ENSLBEG00000020869noc2l10059.802Labrus_bergylta
ENSG00000188976NOC2L9954.822ENSLOCG00000007227noc2l8659.211Lepisosteus_oculatus
ENSG00000188976NOC2L6871.209ENSLAFG00000025891-10070.825Loxodonta_africana
ENSG00000188976NOC2L10092.450ENSMFAG00000032890NOC2L10092.715Macaca_fascicularis
ENSG00000188976NOC2L10092.667ENSMMUG00000015800NOC2L10092.800Macaca_mulatta
ENSG00000188976NOC2L10091.711ENSMNEG00000044359NOC2L10091.842Macaca_nemestrina
ENSG00000188976NOC2L9991.788ENSMLEG00000028428NOC2L9991.523Mandrillus_leucophaeus
ENSG00000188976NOC2L9957.467ENSMAMG00000009952noc2l10059.801Mastacembelus_armatus
ENSG00000188976NOC2L8660.000ENSMZEG00005013227noc2l9956.653Maylandia_zebra
ENSG00000188976NOC2L9161.718ENSMGAG00000003512NOC2L9957.326Meleagris_gallopavo
ENSG00000188976NOC2L10076.627ENSMAUG00000012860Noc2l10075.995Mesocricetus_auratus
ENSG00000188976NOC2L10080.739ENSMICG00000008289NOC2L10080.556Microcebus_murinus
ENSG00000188976NOC2L10073.733ENSMOCG00000019617Noc2l10078.894Microtus_ochrogaster
ENSG00000188976NOC2L9258.721ENSMMOG00000009136noc2l9558.526Mola_mola
ENSG00000188976NOC2L9655.907ENSMODG00000018641-7957.842Monodelphis_domestica
ENSG00000188976NOC2L10075.564MGP_CAROLIEiJ_G0026926Noc2l10077.722Mus_caroli
ENSG00000188976NOC2L10074.147ENSMUSG00000095567Noc2l10076.884Mus_musculus
ENSG00000188976NOC2L10076.228MGP_PahariEiJ_G0029275Noc2l10078.559Mus_pahari
ENSG00000188976NOC2L10074.055MGP_SPRETEiJ_G0027921Noc2l10077.722Mus_spretus
ENSG00000188976NOC2L9975.393ENSMPUG00000013830NOC2L9975.393Mustela_putorius_furo
ENSG00000188976NOC2L9377.479ENSMLUG00000008025NOC2L10077.904Myotis_lucifugus
ENSG00000188976NOC2L10076.533ENSNGAG00000015129Noc2l10079.564Nannospalax_galili
ENSG00000188976NOC2L10090.387ENSNLEG00000000013NOC2L10090.254Nomascus_leucogenys
ENSG00000188976NOC2L10084.646ENSNLEG00000010565-10085.047Nomascus_leucogenys
ENSG00000188976NOC2L9263.081ENSMEUG00000000693NOC2L10062.209Notamacropus_eugenii
ENSG00000188976NOC2L8768.153ENSOPRG00000008154-9068.153Ochotona_princeps
ENSG00000188976NOC2L8077.219ENSODEG00000009486NOC2L10077.219Octodon_degus
ENSG00000188976NOC2L9955.817ENSONIG00000002402noc2l9955.226Oreochromis_niloticus
ENSG00000188976NOC2L8475.725ENSOCUG00000011036NOC2L9976.110Oryctolagus_cuniculus
ENSG00000188976NOC2L9955.906ENSORLG00000005561noc2l10057.789Oryzias_latipes
ENSG00000188976NOC2L9955.643ENSORLG00020000314noc2l9956.863Oryzias_latipes_hni
ENSG00000188976NOC2L9158.798ENSORLG00015000113noc2l9558.884Oryzias_latipes_hsok
ENSG00000188976NOC2L9955.308ENSOMEG00000022096noc2l10057.166Oryzias_melastigma
ENSG00000188976NOC2L10079.233ENSOGAG00000024987NOC2L10078.968Otolemur_garnettii
ENSG00000188976NOC2L10078.382ENSOARG00000007909NOC2L10078.382Ovis_aries
ENSG00000188976NOC2L10085.087ENSPPAG00000035688-10084.554Pan_paniscus
ENSG00000188976NOC2L9877.628ENSPPRG00000023063NOC2L10077.483Panthera_pardus
ENSG00000188976NOC2L9771.798ENSPTIG00000004690NOC2L9972.021Panthera_tigris_altaica
ENSG00000188976NOC2L9297.110ENSPTRG00000050965-10097.110Pan_troglodytes
ENSG00000188976NOC2L10086.649ENSPTRG00000050461-10086.649Pan_troglodytes
ENSG00000188976NOC2L10098.131ENSPTRG00000022530NOC2L10098.131Pan_troglodytes
ENSG00000188976NOC2L10092.133ENSPANG00000024464NOC2L10092.400Papio_anubis
ENSG00000188976NOC2L9955.336ENSPKIG00000013389noc2l10057.825Paramormyrops_kingsleyae
ENSG00000188976NOC2L9064.012ENSPSIG00000012303NOC2L9864.012Pelodiscus_sinensis
ENSG00000188976NOC2L9956.124ENSPMGG00000009445noc2l9955.749Periophthalmus_magnuspinnatus
ENSG00000188976NOC2L10076.393ENSPEMG00000010309Noc2l10075.830Peromyscus_maniculatus_bairdii
ENSG00000188976NOC2L9167.811ENSPCIG00000001294-9768.201Phascolarctos_cinereus
ENSG00000188976NOC2L9953.927ENSPFOG00000019047noc2l9954.881Poecilia_formosa
ENSG00000188976NOC2L9956.110ENSPLAG00000020462noc2l9957.219Poecilia_latipinna
ENSG00000188976NOC2L9956.184ENSPMEG00000005655noc2l9956.897Poecilia_mexicana
ENSG00000188976NOC2L7460.862ENSPREG00000015280noc2l9462.949Poecilia_reticulata
ENSG00000188976NOC2L9090.767ENSPPYG00000002028NOC2L10090.767Pongo_abelii
ENSG00000188976NOC2L8274.434ENSPCAG00000013364NOC2L9974.351Procavia_capensis
ENSG00000188976NOC2L10079.735ENSPCOG00000019653NOC2L10080.556Propithecus_coquereli
ENSG00000188976NOC2L5082.857ENSPVAG00000010828-6482.857Pteropus_vampyrus
ENSG00000188976NOC2L8959.820ENSPNYG00000006439noc2l9955.979Pundamilia_nyererei
ENSG00000188976NOC2L9957.124ENSPNAG00000019855noc2l9956.430Pygocentrus_nattereri
ENSG00000188976NOC2L8675.428ENSRNOG00000021392Noc2l9576.911Rattus_norvegicus
ENSG00000188976NOC2L10093.122ENSRBIG00000037760NOC2L9992.857Rhinopithecus_bieti
ENSG00000188976NOC2L10092.999ENSRROG00000024251NOC2L9992.602Rhinopithecus_roxellana
ENSG00000188976NOC2L7530.900YOR206W-7931.046Saccharomyces_cerevisiae
ENSG00000188976NOC2L10089.600ENSSBOG00000020276NOC2L10088.800Saimiri_boliviensis_boliviensis
ENSG00000188976NOC2L9957.256ENSSFOG00015006109noc2l9956.860Scleropages_formosus
ENSG00000188976NOC2L9957.784ENSSMAG00000018439noc2l9957.520Scophthalmus_maximus
ENSG00000188976NOC2L9958.344ENSSDUG00000007854noc2l9759.433Seriola_dumerili
ENSG00000188976NOC2L9958.081ENSSLDG00000001353noc2l10057.181Seriola_lalandi_dorsalis
ENSG00000188976NOC2L8272.327ENSSARG00000006538NOC2L9070.909Sorex_araneus
ENSG00000188976NOC2L9158.978ENSSPUG00000018958NOC2L9358.686Sphenodon_punctatus
ENSG00000188976NOC2L10078.486ENSSSCG00000023973NOC2L10078.220Sus_scrofa
ENSG00000188976NOC2L9265.893ENSTGUG00000003958-10064.740Taeniopygia_guttata
ENSG00000188976NOC2L5254.381ENSTGUG00000014842-10054.381Taeniopygia_guttata
ENSG00000188976NOC2L9556.516ENSTRUG00000009437noc2l9858.106Takifugu_rubripes
ENSG00000188976NOC2L9855.366ENSTNIG00000015158noc2l9956.005Tetraodon_nigroviridis
ENSG00000188976NOC2L10074.567ENSTTRG00000003188NOC2L9974.567Tursiops_truncatus
ENSG00000188976NOC2L6480.745ENSUAMG00000027519NOC2L8780.538Ursus_americanus
ENSG00000188976NOC2L10077.467ENSUMAG00000002714NOC2L10077.927Ursus_maritimus
ENSG00000188976NOC2L10076.610ENSVVUG00000003648NOC2L10076.478Vulpes_vulpes
ENSG00000188976NOC2L9258.601ENSXCOG00000004715noc2l9957.221Xiphophorus_couchianus
ENSG00000188976NOC2L9956.464ENSXMAG00000003835noc2l9957.219Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II21873635.IBAProcess
GO:0000122negative regulation of transcription by RNA polymerase II20123734.20959462.IDAProcess
GO:0002903negative regulation of B cell apoptotic process20959462.IMPProcess
GO:0003682chromatin binding16322561.20123734.IDAFunction
GO:0003714transcription corepressor activity21873635.IBAFunction
GO:0003714transcription corepressor activity16322561.IDAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding16322561.20123734.20959462.21078624.IPIFunction
GO:0005634nucleus16322561.20959462.IDAComponent
GO:0005654nucleoplasm21873635.IBAComponent
GO:0005654nucleoplasm20123734.IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus20123734.IDAComponent
GO:0005829cytosol-IDAComponent
GO:0006915apoptotic process-IEAProcess
GO:0030690Noc1p-Noc2p complex21873635.IBAComponent
GO:0030691Noc2p-Noc3p complex21873635.IBAComponent
GO:0031491nucleosome binding16322561.IDAFunction
GO:0031497chromatin assembly16322561.IDAProcess
GO:0034644cellular response to UV20959462.IDAProcess
GO:0035067negative regulation of histone acetylation21873635.IBAProcess
GO:0035067negative regulation of histone acetylation16322561.IDAProcess
GO:0042273ribosomal large subunit biogenesis21873635.IBAProcess
GO:0042393histone binding21873635.IBAFunction
GO:0042393histone binding16322561.IDAFunction
GO:0070491repressing transcription factor binding21873635.IBAFunction
GO:0070491repressing transcription factor binding16322561.IDAFunction
GO:1901796regulation of signal transduction by p53 class mediator-TASProcess
GO:2001243negative regulation of intrinsic apoptotic signaling pathway16322561.IMPProcess

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