EuRBPDB

Description
Ensembl ID
ENSG00000197157 (Gene tree)
Gene ID
27044
Gene Symbol
SND1
Alias
TDRD11|p100
Full Name
staphylococcal nuclease and tudor domain containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
440,491 bases
Position
chr7:127,652,119-128,092,609
Accession
30646
RBP type
canonical RBP
Summary
This gene encodes a transcriptional co-activator that interacts with the acidic domain of Epstein-Barr virus nuclear antigen 2 (EBNA 2), a transcriptional activator that is required for B-lymphocyte transformation. Other transcription factors that interact with this protein are signal transducers and activators of transcription, STATs. This protein is also thought to be essential for normal cell growth. A similar protein in mammals and other organisms is a component of the RNA-induced silencing complex (RISC). [provided by RefSeq, Jul 2016]
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSP00000346762TUDORPF00567.241.5e-2611
ENSP00000419327TUDORPF00567.241.4e-0911
ENSP00000346762SNasePF00565.174.7e-6915
ENSP00000346762SNasePF00565.174.7e-6925
ENSP00000346762SNasePF00565.174.7e-6935
ENSP00000346762SNasePF00565.174.7e-6945
ENSP00000346762SNasePF00565.174.7e-6955
RNA binding proteome (RBPome)
PID
Title
Method
Time
Author
Doi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction（RNA-Binding Site）
37.7%27.4%26.5%5.31%1.3%1.18%0.406%0.213%
CDSintron3-UTR5-UTRsnRNAsnoRNApseudogenemisc_RNAK562 Cell Line
75.7%18.8%2.66%2.38%0.228%0.113%0.0491%0.00556%
CDS3-UTRintron5-UTRsnoRNApseudogenesnRNAmisc_RNAHepG2 Cell Line

Literatures on RNA binding capacity
Expression
Adipose_TissueAdrenal_GlandBladderBloodBlood_VesselBrainBreastCervix_UteriColonEsophagusFallopian_TubeHeartKidneyLiverLungMuscleNerveOvaryPancreasPituitaryProstateSalivary_GlandSkinSmall_IntestineSpleenStomachTestisThyroidUterusVagina050100150200250
Adipose_TissueAdrenal_GlandBladderBloodBlood_VesselBrainBreastCervix_UteriColonEsophagusFallopian_TubeHeartKidneyLiverLungMuscleNerveOvaryPancreasPituitaryProstateSalivary_GlandSkinSmall_IntestineSpleenStomachTestisThyroidUterusVaginaTPM
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENST00000485871SND1-212597--- (aa)--
ENST00000470723SND1-209568--- (aa)--
ENST00000354725SND1-2013476XM_017011987ENSP00000346762910 (aa)XP_016867476Q7KZF4
ENST00000484767SND1-211460--- (aa)--
ENST00000483503SND1-210603--- (aa)--
ENST00000467238SND1-205716--- (aa)--
ENST00000489417SND1-2141447--- (aa)--
ENST00000463020SND1-203793--- (aa)--
ENST00000468621SND1-207494--- (aa)--
ENST00000492840SND1-216472--- (aa)--
ENST00000461056SND1-202555--- (aa)--
ENST00000492772SND1-215549--- (aa)--
ENST00000468166SND1-206552--- (aa)--
ENST00000470463SND1-208530--- (aa)--
ENST00000465900SND1-204630--- (aa)--
ENST00000486037SND1-213695-ENSP00000419327231 (aa)-H7C597
Gene Model
Pathways
Pathway ID
Pathway Name
Source
hsa05203Viral carcinogenesisKEGG
Phenotypes
ensgID
Trait
pValue
Pubmed ID
ENSG00000197157Cholesterol, LDL2.75727992015498E-717903299
ENSG00000197157Mental Competency4.6125900698314E-917903295
ENSG00000197157Blood Sedimentation7.201e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation5.617e-005-
ENSG00000197157Blood Sedimentation7.231e-005-
ENSG00000197157Blood Sedimentation5.732e-005-
ENSG00000197157Blood Pressure5.9449917E-005-
ENSG00000197157Blood Pressure6.5559270E-006-
ENSG00000197157Platelet Function Tests8.7400000E-006-
ENSG00000197157Platelet Function Tests2.9043870E-006-
ENSG00000197157Platelet Function Tests1.5587884E-006-
ENSG00000197157Platelet Function Tests2.9043870E-006-
ENSG00000197157Language Tests5.2029000E-005-
ENSG00000197157Language Tests1.6633000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.7621000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.2052000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.2052000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.7621000E-005-
ENSG00000197157Child Development Disorders, Pervasive6.2724000E-005-
ENSG00000197157Child Development Disorders, Pervasive4.4404000E-005-
ENSG00000197157Child Development Disorders, Pervasive3.1778000E-005-
ENSG00000197157Child Development Disorders, Pervasive2.8447000E-005-
GWAS
ensgID
SNP
Chromosome
Position
SNP-risk
Trait
PubmedID
95% CI
Or or BEAT
EFO ID
ENSG00000197157rs779998257127932924AEducational attainment (MTAG)30038396[0.024-0.038] unit increase0.0313EFO_0004784
ENSG00000197157rs37356347128032622GSelf-reported math ability30038396[0.012-0.02] unit increase0.0161EFO_0004875
ENSG00000197157rs1171238837128042066AHighest math class taken30038396[0.022-0.045] unit decrease0.0337EFO_0004875
ENSG00000197157rs37356347128032622ASelf-reported math ability (MTAG)30038396[0.011-0.019] unit decrease0.0151EFO_0004875
ENSG00000197157rs779998257127932924AHighest math class taken (MTAG)30038396[0.029-0.047] unit increase0.0381EFO_0004875
ENSG00000197157rs8061667127669880TFeeling worry29500382unit decrease5.949EFO_0009589
ENSG00000197157rs38080727127955520TFeeling worry29500382unit increase6.332EFO_0009589
ENSG00000197157rs171513777127817955AFeeling worry29500382unit increase5.989EFO_0009589
ENSG00000197157rs779998257127932924ACognitive performance (MTAG)30038396[0.034-0.058] unit increase0.0461EFO_0008354
ENSG00000197157rs732349017127758194AGeneral cognitive ability29844566z-score increase6.336EFO_0004337
ENSG00000197157rs780669607128076840AGeneral cognitive ability29844566z-score increase5.79EFO_0004337
ENSG00000197157rs177183957127738598?Reaction time29844566[0.0046-0.0115] unit decrease0.0080441EFO_0008393
ENSG00000197157rs13622677127961201?Reaction time29844566[0.0057-0.0126] unit increase0.009122EFO_0008393
ENSG00000197157rs47313927128048098AIntelligence29942086z-score decrease7.309EFO_0004337
ENSG00000197157rs38080937127732371AIntelligence29942086z-score decrease6.251EFO_0004337
ENSG00000197157rs37577717127898506TIntelligence29942086z-score decrease5.755EFO_0004337
ENSG00000197157rs125362537127955024CIntelligence29942086z-score increase5.928EFO_0004337
ENSG00000197157rs779998257127932924AEducational attainment (years of education)30038396[0.022-0.037] unit increase0.0294EFO_0004784
ENSG00000197157rs752788397127934343TEducational attainment (years of education)30038396[0.021-0.037] unit increase0.0291EFO_0004784
ENSG00000197157rs795209627128031458AEudaimonic well-being30279531[NR] z score decrease6.015EFO_0007869
ENSG00000197157rs64671457127742211ANumber of sexual partners30643258[0.011-0.02] unit decrease0.015750142EFO_0007877
ENSG00000197157rs132462867127900324?Systolic blood pressure30595370EFO_0006335
ENSG00000197157rs7203007127967421AAdventurousness30643258[0.013-0.025] unit decrease0.019167446EFO_0008579
ENSG00000197157rs38080727127955520TAdventurousness30643258[0.0088-0.0175] unit decrease0.01315797EFO_0008579
ENSG00000197157rs7127077127682560TGeneral risk tolerance (MTAG)30643258[0.008-0.013] unit decrease0.0105EFO_0008579
ENSG00000197157rs7203007127967421AGeneral risk tolerance (MTAG)30643258[0.0091-0.0161] unit decrease0.0126EFO_0008579
Protein-Protein Interaction (PPI)
CanvasJS.com
* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSG00000197157SND110083.662ENSAPOG00000017599snd19984.538Acanthochromis_polyacanthus
ENSG00000197157SND110098.575ENSAMEG00000004664SND19498.575Ailuropoda_melanoleuca
ENSG00000197157SND19881.971ENSACIG00000003551snd19981.849Amphilophus_citrinellus
ENSG00000197157SND110083.443ENSAOCG00000014166snd19984.316Amphiprion_ocellaris
ENSG00000197157SND110083.443ENSAPEG00000007067snd19984.316Amphiprion_percula
ENSG00000197157SND19882.793ENSATEG00000018475snd18884.036Anabas_testudineus
ENSG00000197157SND110099.121ENSANAG00000034463SND110099.121Aotus_nancymaae
ENSG00000197157SND19982.967ENSACLG00000022897snd19983.964Astatotilapia_calliptera
ENSG00000197157SND19984.158ENSAMXG00000016318snd19884.744Astyanax_mexicanus
ENSG00000197157SND110098.681ENSBTAG00000010692SND110098.681Bos_taurus
ENSG00000197157SND19358.784WBGene00006626tsn-19847.149Caenorhabditis_elegans
ENSG00000197157SND110098.901ENSCJAG00000017668SND110098.901Callithrix_jacchus
ENSG00000197157SND110099.011ENSCAFG00000001700SND110099.011Canis_familiaris
ENSG00000197157SND110099.011ENSCAFG00020021639SND110099.011Canis_lupus_dingo
ENSG00000197157SND110099.011ENSCHIG00000023390SND110099.011Capra_hircus
ENSG00000197157SND17399.472ENSTSYG00000004979SND19699.472Carlito_syrichta
ENSG00000197157SND19984.556ENSCAPG00000010677SND19884.598Cavia_aperea
ENSG00000197157SND110097.912ENSCPOG00000006251SND110097.912Cavia_porcellus
ENSG00000197157SND110099.231ENSCCAG00000036847SND110099.231Cebus_capucinus
ENSG00000197157SND110099.560ENSCATG00000035214SND110099.560Cercocebus_atys
ENSG00000197157SND110098.022ENSCLAG00000011796SND110098.022Chinchilla_lanigera
ENSG00000197157SND110099.560ENSCSAG00000010182SND110099.560Chlorocebus_sabaeus
ENSG00000197157SND18095.122ENSCHOG00000002218SND18688.235Choloepus_hoffmanni
ENSG00000197157SND110092.088ENSCPBG00000018094SND19893.049Chrysemys_picta_bellii
ENSG00000197157SND19856.921ENSCING00000000524-9856.921Ciona_intestinalis
ENSG00000197157SND19958.086ENSCSAVG00000008807-9958.232Ciona_savignyi
ENSG00000197157SND110099.560ENSCANG00000035119SND110099.560Colobus_angolensis_palliatus
ENSG00000197157SND110097.033ENSCGRG00001022514Snd110097.033Cricetulus_griseus_chok1gshd
ENSG00000197157SND19797.172ENSCGRG00000012277Snd19997.172Cricetulus_griseus_crigri
ENSG00000197157SND19884.340ENSCSEG00000008661snd19884.340Cynoglossus_semilaevis
ENSG00000197157SND110083.882ENSCVAG00000010316snd110083.678Cyprinodon_variegatus
ENSG00000197157SND110084.337ENSDARG00000006766snd19787.410Danio_rerio
ENSG00000197157SND19796.054ENSDNOG00000006795SND110096.054Dasypus_novemcinctus
ENSG00000197157SND110098.571ENSDORG00000000336Snd110098.571Dipodomys_ordii
ENSG00000197157SND110059.603FBgn0035121Tudor-SN9850.486Drosophila_melanogaster
ENSG00000197157SND190100.000ENSETEG00000000375SND192100.000Echinops_telfairi
ENSG00000197157SND16173.759ENSEBUG00000014201-8475.956Eptatretus_burgeri
ENSG00000197157SND110097.408ENSEASG00005008513SND110097.408Equus_asinus_asinus
ENSG00000197157SND110099.011ENSECAG00000011451SND110099.011Equus_caballus
ENSG00000197157SND110097.887ENSEEUG00000014737SND110086.593Erinaceus_europaeus
ENSG00000197157SND19982.127ENSELUG00000001805snd19583.055Esox_lucius
ENSG00000197157SND110099.011ENSFCAG00000008289SND110099.011Felis_catus
ENSG00000197157SND110098.242ENSFDAG00000015881SND110098.242Fukomys_damarensis
ENSG00000197157SND19982.201ENSFHEG00000004093snd19784.750Fundulus_heteroclitus
ENSG00000197157SND16474.859ENSGMOG00000018932snd16474.859Gadus_morhua
ENSG00000197157SND16297.902ENSGALG00000052684-5093.583Gallus_gallus
ENSG00000197157SND110084.101ENSGAFG00000008421snd19985.118Gambusia_affinis
ENSG00000197157SND110053.637ENSGACG00000019793snd19854.093Gasterosteus_aculeatus
ENSG00000197157SND110099.780ENSGGOG00000009614SND110099.780Gorilla_gorilla
ENSG00000197157SND19983.480ENSHBUG00000019135snd19983.964Haplochromis_burtoni
ENSG00000197157SND110097.912ENSHGLG00000003618SND110097.912Heterocephalus_glaber_female
ENSG00000197157SND19997.459ENSHGLG00100012449SND110097.459Heterocephalus_glaber_male
ENSG00000197157SND110082.566ENSHCOG00000005266snd19883.781Hippocampus_comes
ENSG00000197157SND110082.385ENSIPUG00000013279snd19883.408Ictalurus_punctatus
ENSG00000197157SND110098.571ENSSTOG00000002140SND110098.571Ictidomys_tridecemlineatus
ENSG00000197157SND110098.681ENSJJAG00000009561Snd110098.681Jaculus_jaculus
ENSG00000197157SND110083.882ENSKMAG00000016997snd19884.899Kryptolebias_marmoratus
ENSG00000197157SND110084.899ENSLBEG00000013563snd19983.537Labrus_bergylta
ENSG00000197157SND19985.226ENSLOCG00000015537snd19885.226Lepisosteus_oculatus
ENSG00000197157SND110098.242ENSLAFG00000009696SND110098.242Loxodonta_africana
ENSG00000197157SND110099.560ENSMFAG00000038114SND110099.560Macaca_fascicularis
ENSG00000197157SND110099.560ENSMMUG00000015432SND110099.560Macaca_mulatta
ENSG00000197157SND110099.560ENSMNEG00000039808SND110099.661Macaca_nemestrina
ENSG00000197157SND110099.451ENSMLEG00000029040SND110099.548Mandrillus_leucophaeus
ENSG00000197157SND19983.682ENSMAMG00000011739snd19884.375Mastacembelus_armatus
ENSG00000197157SND19982.967ENSMZEG00005005681snd19983.964Maylandia_zebra
ENSG00000197157SND110099.121ENSMICG00000000097SND110099.121Microcebus_murinus
ENSG00000197157SND110097.912ENSMOCG00000005040Snd110097.912Microtus_ochrogaster
ENSG00000197157SND110083.224ENSMMOG00000001795snd19984.093Mola_mola
ENSG00000197157SND19995.652ENSMODG00000015182SND19995.652Monodelphis_domestica
ENSG00000197157SND110083.114ENSMALG00000012071snd19883.929Monopterus_albus
ENSG00000197157SND110097.582MGP_CAROLIEiJ_G0028159Snd110097.582Mus_caroli
ENSG00000197157SND110097.363ENSMUSG00000001424Snd110097.363Mus_musculus
ENSG00000197157SND110097.582MGP_PahariEiJ_G0021917Snd110098.314Mus_pahari
ENSG00000197157SND110097.582MGP_SPRETEiJ_G0029159Snd110097.582Mus_spretus
ENSG00000197157SND110098.352ENSMPUG00000006545SND110098.352Mustela_putorius_furo
ENSG00000197157SND110098.621ENSMLUG00000017130SND19997.207Myotis_lucifugus
ENSG00000197157SND110097.912ENSNGAG00000011186Snd110097.912Nannospalax_galili
ENSG00000197157SND19982.857ENSNBRG00000006681snd19983.853Neolamprologus_brichardi
ENSG00000197157SND110099.670ENSNLEG00000012263SND110099.887Nomascus_leucogenys
ENSG00000197157SND191100.000ENSOPRG00000013405SND191100.000Ochotona_princeps
ENSG00000197157SND110098.242ENSODEG00000011502SND110098.242Octodon_degus
ENSG00000197157SND19982.857ENSONIG00000011481snd19683.853Oreochromis_niloticus
ENSG00000197157SND19894.144ENSOANG00000000817SND19993.534Ornithorhynchus_anatinus
ENSG00000197157SND110097.363ENSOCUG00000001620SND110097.363Oryctolagus_cuniculus
ENSG00000197157SND19883.799ENSORLG00000015201snd19883.799Oryzias_latipes
ENSG00000197157SND19883.911ENSORLG00020013991snd19883.911Oryzias_latipes_hni
ENSG00000197157SND19883.911ENSORLG00015012436snd19883.911Oryzias_latipes_hsok
ENSG00000197157SND110083.004ENSOMEG00000006406snd19884.228Oryzias_melastigma
ENSG00000197157SND110099.013ENSOGAG00000013356SND19499.013Otolemur_garnettii
ENSG00000197157SND110097.297ENSOARG00000002149SND110096.158Ovis_aries
ENSG00000197157SND110099.890ENSPPAG00000042947SND110099.890Pan_paniscus
ENSG00000197157SND110099.011ENSPPRG00000004494SND110099.011Panthera_pardus
ENSG00000197157SND110098.901ENSPTIG00000014214SND110098.901Panthera_tigris_altaica
ENSG00000197157SND110099.890ENSPTRG00000023911SND110099.890Pan_troglodytes
ENSG00000197157SND19799.661ENSPANG00000011997SND19999.661Papio_anubis
ENSG00000197157SND19981.477ENSPKIG00000023494snd19881.798Paramormyrops_kingsleyae
ENSG00000197157SND19282.994ENSPMGG00000003629snd110082.994Periophthalmus_magnuspinnatus
ENSG00000197157SND110097.802ENSPEMG00000010240Snd110097.802Peromyscus_maniculatus_bairdii
ENSG00000197157SND19773.446ENSPMAG00000007915-9973.446Petromyzon_marinus
ENSG00000197157SND110096.154ENSPCIG00000011561SND110096.154Phascolarctos_cinereus
ENSG00000197157SND110083.772ENSPFOG00000001557snd19984.650Poecilia_formosa
ENSG00000197157SND110083.772ENSPLAG00000018459snd19684.650Poecilia_latipinna
ENSG00000197157SND110084.211ENSPMEG00000006803snd19985.095Poecilia_mexicana
ENSG00000197157SND110083.882ENSPREG00000002189snd19984.761Poecilia_reticulata
ENSG00000197157SND19399.504ENSPPYG00000017972SND110099.504Pongo_abelii
ENSG00000197157SND110086.593ENSPCAG00000011305SND19986.511Procavia_capensis
ENSG00000197157SND110099.341ENSPCOG00000026791SND110099.435Propithecus_coquereli
ENSG00000197157SND110096.923ENSPVAG00000013945SND110096.923Pteropus_vampyrus
ENSG00000197157SND19982.967ENSPNYG00000000932snd19983.964Pundamilia_nyererei
ENSG00000197157SND110083.260ENSPNAG00000001206snd19884.222Pygocentrus_nattereri
ENSG00000197157SND19997.247ENSRNOG00000031173Snd19997.247Rattus_norvegicus
ENSG00000197157SND17399.624ENSRBIG00000027782-9399.810Rhinopithecus_bieti
ENSG00000197157SND110099.560ENSRROG00000033020SND110099.560Rhinopithecus_roxellana
ENSG00000197157SND110099.121ENSSBOG00000032461SND110099.121Saimiri_boliviensis_boliviensis
ENSG00000197157SND19892.793ENSSHAG00000015359SND110092.793Sarcophilus_harrisii
ENSG00000197157SND110082.155ENSSFOG00015001103snd19883.241Scleropages_formosus
ENSG00000197157SND19883.781ENSSMAG00000001932snd19383.519Scophthalmus_maximus
ENSG00000197157SND110083.443ENSSDUG00000002699snd19284.316Seriola_dumerili
ENSG00000197157SND110076.206ENSSLDG00000001950snd19876.974Seriola_lalandi_dorsalis
ENSG00000197157SND18696.226ENSSARG00000004877SND19296.226Sorex_araneus
ENSG00000197157SND17387.826ENSSPUG00000017586SND19687.826Sphenodon_punctatus
ENSG00000197157SND17684.602ENSSPAG00000021398snd19686.736Stegastes_partitus
ENSG00000197157SND110098.681ENSSSCG00000016590SND110098.681Sus_scrofa
ENSG00000197157SND19983.040ENSTRUG00000014067snd19883.557Takifugu_rubripes
ENSG00000197157SND110083.114ENSTNIG00000011019snd19587.219Tetraodon_nigroviridis
ENSG00000197157SND19393.042ENSTBEG00000003999SND110093.042Tupaia_belangeri
ENSG00000197157SND110094.066ENSTTRG00000006059SND110094.066Tursiops_truncatus
ENSG00000197157SND19198.669ENSUAMG00000005604-9398.669Ursus_americanus
ENSG00000197157SND17190.130ENSUAMG00000002820-8690.054Ursus_americanus
ENSG00000197157SND110098.791ENSUMAG00000005960SND110098.791Ursus_maritimus
ENSG00000197157SND177100.000ENSVPAG00000008302SND174100.000Vicugna_pacos
ENSG00000197157SND110098.791ENSVVUG00000007226SND110098.791Vulpes_vulpes
ENSG00000197157SND19784.633ENSXETG00000023043snd110085.566Xenopus_tropicalis
ENSG00000197157SND19281.710ENSXCOG00000013629snd19981.710Xiphophorus_couchianus
ENSG00000197157SND110084.101ENSXMAG00000011469snd19984.983Xiphophorus_maculatus
Gene Ontology
Go ID
Go_term
PubmedID
Evidence
Category
GO:0001649osteoblast differentiation16210410.HDAProcess
GO:0003712transcription coregulator activity7651391.TASFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding18453631.IDAFunction
GO:0004518nuclease activity21873635.IBAFunction
GO:0004519endonuclease activity18453631.IDAFunction
GO:0004521endoribonuclease activity28546213.IDAFunction
GO:0005515protein binding20643132.20937909.24882364.24981741.28546213.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005737cytoplasm21873635.IBAComponent
GO:0005829cytosol-IDAComponent
GO:0005829cytosol-TASComponent
GO:0006401RNA catabolic process21873635.IBAProcess
GO:0010564regulation of cell cycle process28546213.IMPProcess
GO:0010587miRNA catabolic process28546213.IDAProcess
GO:0016020membrane16210410.HDAComponent
GO:0016032viral process-IEAProcess
GO:0016442RISC complex-IEAComponent
GO:0031047gene silencing by RNA-IEAProcess
GO:0042470melanosome-IEAComponent
GO:0045296cadherin binding25468996.HDAFunction
GO:0070062extracellular exosome20458337.HDAComponent
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic-IEAProcess
GO:0097433dense body-IEAComponent
GO:1903506regulation of nucleic acid-templated transcription-IEAProcess
GO:1905172RISC complex binding28546213.IDAFunction

Cancer associated literatures

Differential Expression

Expression in 33 cancers
ACCBLCABRCACESCCHOLCOADDLBCESCAGBMHNSCKICHKIRCKIRPLAMLLGGLIHCLUADLUSCMESOOVPAADPCPGPRADREADSARCSKCMSTADTGCTTHCATHYMUCECUCSUVM050100150200250300
ACCBLCABRCACESCCHOLCOADDLBCESCAGBMHNSCKICHKIRCKIRPLAMLLGGLIHCLUADLUSCMESOOVPAADPCPGPRADREADSARCSKCMSTADTGCTTHCATHYMUCECUCSUVMFPKM

Mutations

Copy Number Variations (CNVs)
Cancer
Type
Freq
Q-value
ACCDEL0.07780.12261
CESCDEL0.16610.0016147
DLBCDEL0.10420.03486
KIRCAMP0.2860.075418
LAMLDEL0.12573.4101e-05
LGGAMP0.31381.5525e-07
LIHCDEL0.08380.24831
PAADDEL0.07070.049388
TGCTDEL0.05330.11738
THCADEL00.27619
UCECDEL0.09650.0001859
UCSDEL0.30360.10142

Survival Analysis
Cancer
P-value
Q-value
THYM0.024
KIRC0.0087
SARC0.011
MESO0.019
UCS0.035
KIRP0.019
BLCA0.00054
KICH0.013
UCEC0.00037
GBM0.0038
LIHC0.0098

Drugs

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Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742

Mpgyi