EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000197213 (Gene tree)
Gene ID: 342933
Gene Symbol: ZSCAN5B
Alias: ZNF495B|ZNF371
Full Name: zinc finger and SCAN domain containing 5B
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 18,469 bases
Position: chr19:56,189,570-56,208,038
Accession: 34246
RBP type: canonical RBP
Summary: ZSCAN5B (Zinc Finger And SCAN Domain Containing 5B) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include DNA-binding transcription factor activity and DNA-binding transcription factor activity, RNA polymerase II-specific. An important paralog of this gene is ZSCAN5A.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000351883	zf-C2H2	PF00096.26	3.8e-23	1	5
ENSP00000351883	zf-C2H2	PF00096.26	3.8e-23	2	5
ENSP00000351883	zf-C2H2	PF00096.26	3.8e-23	3	5
ENSP00000351883	zf-C2H2	PF00096.26	3.8e-23	4	5
ENSP00000351883	zf-C2H2	PF00096.26	3.8e-23	5	5
ENSP00000466072	zf-C2H2	PF00096.26	3.8e-23	1	5
ENSP00000466072	zf-C2H2	PF00096.26	3.8e-23	2	5
ENSP00000466072	zf-C2H2	PF00096.26	3.8e-23	3	5
ENSP00000466072	zf-C2H2	PF00096.26	3.8e-23	4	5
ENSP00000466072	zf-C2H2	PF00096.26	3.8e-23	5	5
ENSP00000351883	zf-met	PF12874.7	1.3e-09	1	1
ENSP00000466072	zf-met	PF12874.7	1.3e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000587032	ZSCAN5B-203	555	-	ENSP00000468660	137 (aa)	-	K7ESD3
ENST00000358992	ZSCAN5B-201	1626	-	ENSP00000351883	495 (aa)	-	A6NJL1
ENST00000586855	ZSCAN5B-202	2059	XM_005258864	ENSP00000466072	495 (aa)	XP_005258921	A6NJL1
ENST00000589938	ZSCAN5B-204	570	-	ENSP00000465118	169 (aa)	-	K7EJD1

Gene Model

Click here to download ENSG00000197213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000197213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000197213	ZSCAN5B	100	84.615	ENSANAG00000035131	ZSCAN5B	100	78.586	Aotus_nancymaae
ENSG00000197213	ZSCAN5B	100	81.752	ENSCCAG00000024602	ZSCAN5B	100	76.986	Cebus_capucinus
ENSG00000197213	ZSCAN5B	100	88.321	ENSCATG00000038324	ZSCAN5B	100	85.657	Cercocebus_atys
ENSG00000197213	ZSCAN5B	100	89.349	ENSCANG00000024180	ZSCAN5B	100	84.848	Colobus_angolensis_palliatus
ENSG00000197213	ZSCAN5B	100	95.372	ENSGGOG00000014084	-	100	95.372	Gorilla_gorilla
ENSG00000197213	ZSCAN5B	100	95.372	ENSGGOG00000027356	-	100	95.372	Gorilla_gorilla
ENSG00000197213	ZSCAN5B	100	88.757	ENSMFAG00000042210	ZSCAN5B	100	84.646	Macaca_fascicularis
ENSG00000197213	ZSCAN5B	100	88.166	ENSMMUG00000015532	ZSCAN5B	100	84.242	Macaca_mulatta
ENSG00000197213	ZSCAN5B	100	87.591	ENSMNEG00000039908	ZSCAN5B	100	83.838	Macaca_nemestrina
ENSG00000197213	ZSCAN5B	100	77.576	ENSMLEG00000010543	ZSCAN5B	100	77.576	Mandrillus_leucophaeus
ENSG00000197213	ZSCAN5B	100	90.511	ENSNLEG00000010781	ZSCAN5B	100	88.283	Nomascus_leucogenys
ENSG00000197213	ZSCAN5B	100	95.556	ENSPPAG00000009603	ZSCAN5B	100	95.556	Pan_paniscus
ENSG00000197213	ZSCAN5B	100	95.354	ENSPTRG00000024093	ZSCAN5B	100	95.354	Pan_troglodytes
ENSG00000197213	ZSCAN5B	100	86.982	ENSPANG00000034824	ZSCAN5B	100	85.051	Papio_anubis
ENSG00000197213	ZSCAN5B	100	95.620	ENSPPYG00000010442	ZSCAN5B	100	94.141	Pongo_abelii
ENSG00000197213	ZSCAN5B	60	55.518	ENSPCOG00000016550	-	100	55.518	Propithecus_coquereli
ENSG00000197213	ZSCAN5B	100	88.757	ENSRBIG00000040873	ZSCAN5B	100	85.253	Rhinopithecus_bieti
ENSG00000197213	ZSCAN5B	100	88.757	ENSRROG00000015181	ZSCAN5B	100	85.455	Rhinopithecus_roxellana
ENSG00000197213	ZSCAN5B	74	83.168	ENSSBOG00000025168	ZSCAN5B	100	55.061	Saimiri_boliviensis_boliviensis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	-	ISA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006357	regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0046872	metal ion binding	-	IEA	Function