EuRBPDB

Description

Ensembl ID: ENSG00000197976 (Gene tree)
Gene ID: 8227
Gene Symbol: AKAP17A
Alias: XE7|XE7Y|DXYS155E|MGC39904|721P|CCDC133|CXYorf3|SFRS17A
Full Name: A-kinase anchoring protein 17A
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 10,928 bases
Position: chrX:1,591,593-1,602,520
Accession: 18783
RBP type: non-canonical RBP
Summary: This locus encodes a protein kinase A anchoring protein. The encoded protein is part of the spliceosome complex and is involved in the regulation of alternate splicing in some mRNA precursors. Alternatively spliced transcript variants have been identified for this gene.[provided by RefSeq, Sep 2010]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000381261	AKAP17A-202	2187	-	ENSP00000370660	446 (aa)	-	X6RAJ1
ENST00000474361	AKAP17A-203	3232	-	ENSP00000435479	385 (aa)	-	Q02040
ENST00000313871	AKAP17A-201	3204	-	ENSP00000324827	695 (aa)	-	Q02040

Gene Model

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	22681889.	HDA	Function
GO:0005515	protein binding	16982639.25416956.	IPI	Function
GO:0005634	nucleus	19840947.	IDA	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0006355	regulation of transcription, DNA-templated	1438229.	NAS	Process
GO:0006397	mRNA processing	-	IEA	Process
GO:0007165	signal transduction	1438229.	NAS	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	16982639.	IDA	Component
GO:0042113	B cell activation	1438229.	NAS	Process
GO:0043484	regulation of RNA splicing	19840947.	IMP	Process
GO:0051018	protein kinase A binding	19840947.	IDA	Function