EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000198000 (Gene tree)
Gene ID
55035
Gene Symbol
NOL8
Alias
FLJ20736|Nop132|C9orf34
Full Name
nucleolar protein 8
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
28,637 bases
Position
chr9:92,297,358-92,325,994
Accession
23387
RBP type
canonical RBP
Summary
NOL8 binds Ras-related GTP-binding proteins (see MIM 608267) and plays a role in cell growth (Sekiguchi et al., 2004 [PubMed 14660641]).[supplied by OMIM, Mar 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000442037RRM_1PF00076.226.8e-0811
ENSP00000390143RRM_1PF00076.222.6e-0711
ENSP00000412471RRM_1PF00076.228.3e-0711
ENSP00000414112RRM_1PF00076.221.7e-0611
ENSP00000441300RRM_1PF00076.222.2e-0611
ENSP00000401177RRM_1PF00076.222.3e-0611
ENSP00000441140RRM_1PF00076.222.3e-0611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
20020055Identification of small molecule and genetic modulators of AON-induced dystrophin exon skipping by high-throughput screening.PLoS One2009 Dec 17O'Leary DAdoi: 10.1371/journal.pone.0008348.
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000543985NOL8-225769--- (aa)--
ENST00000544321NOL8-226754-ENSP0000044479086 (aa)-F5GXV1
ENST00000482475NOL8-213865--- (aa)--
ENST00000538215NOL8-219566--- (aa)--
ENST00000536593NOL8-2174053-ENSP0000044626586 (aa)-F5GXV1
ENST00000360868NOL8-2024341-ENSP0000035411586 (aa)-F5GXV1
ENST00000433029NOL8-2061396-ENSP00000412471413 (aa)-F5GWN9
ENST00000536624NOL8-218551-ENSP00000442037145 (aa)-F5H8B8
ENST00000542053NOL8-2213393XM_011518824ENSP000004407091099 (aa)XP_011517126Q76FK4
ENST00000467230NOL8-211780--- (aa)--
ENST00000542613NOL8-223421-ENSP0000044259652 (aa)-F5H7D5
ENST00000542573NOL8-222557-ENSP0000044034286 (aa)-F5GXV1
ENST00000535649NOL8-215599--- (aa)--
ENST00000543260NOL8-224639-ENSP0000043761586 (aa)-F5GXV1
ENST00000463593NOL8-2101238--- (aa)--
ENST00000545444NOL8-2282090-ENSP00000439829130 (aa)-F5H0I5
ENST00000535807NOL8-216575-ENSP00000442666109 (aa)-F5H797
ENST00000477862NOL8-212507--- (aa)--
ENST00000538802NOL8-220418--- (aa)--
ENST00000434228NOL8-2073400-ENSP0000041575086 (aa)-F5GXV1
ENST00000442668NOL8-2084281XM_006717166ENSP000004011771167 (aa)XP_006717229Q76FK4
ENST00000411621NOL8-203572-ENSP00000388335146 (aa)-F5H692
ENST00000535387NOL8-2143390XM_017014876ENSP000004413001129 (aa)XP_016870365Q76FK4
ENST00000544867NOL8-2274598-ENSP000004397511085 (aa)-F5H101
ENST00000432670NOL8-2053136-ENSP00000414112969 (aa)-F8WE42
ENST00000421075NOL8-2041098-ENSP00000390143257 (aa)-A0A0A0MSJ1
ENST00000445919NOL8-2091044-ENSP00000390791101 (aa)-F5H532
ENST00000358855NOL8-2014422XM_006717169ENSP000003517231099 (aa)XP_006717232Q76FK4
ENST00000545558NOL8-2294343-ENSP000004411401167 (aa)-Q76FK4
Gene Model
Click here to download ENSG00000198000's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000198000C-Reactive Protein5.153e-00519060910
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000198000's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000198000NOL810059.322ENSAPOG00000008905-9051.786Acanthochromis_polyacanthus
ENSG00000198000NOL810090.826ENSAMEG00000013488NOL810065.816Ailuropoda_melanoleuca
ENSG00000198000NOL88664.368ENSAOCG00000003570-9664.368Amphiprion_ocellaris
ENSG00000198000NOL88664.368ENSAPEG00000004400-9664.368Amphiprion_percula
ENSG00000198000NOL89130.508ENSAPEG00000020964-9230.508Amphiprion_percula
ENSG00000198000NOL810059.322ENSATEG00000002107nol89345.455Anabas_testudineus
ENSG00000198000NOL810071.304ENSAPLG00000005526NOL810042.469Anas_platyrhynchos
ENSG00000198000NOL810095.205ENSANAG00000033271NOL810091.538Aotus_nancymaae
ENSG00000198000NOL810057.627ENSACLG00000004270nol87843.363Astatotilapia_calliptera
ENSG00000198000NOL89864.646ENSAMXG00000029217-9464.646Astyanax_mexicanus
ENSG00000198000NOL810088.356ENSBTAG00000018613NOL810073.208Bos_taurus
ENSG00000198000NOL810095.890ENSCJAG00000039875NOL810093.077Callithrix_jacchus
ENSG00000198000NOL810088.073ENSCAFG00000002324NOL810065.388Canis_familiaris
ENSG00000198000NOL810088.991ENSCAFG00020009514NOL810065.473Canis_lupus_dingo
ENSG00000198000NOL810088.356ENSCHIG00000023837NOL810073.061Capra_hircus
ENSG00000198000NOL810090.411ENSTSYG00000006661NOL810079.557Carlito_syrichta
ENSG00000198000NOL89389.362ENSCPOG00000031767-10089.362Cavia_porcellus
ENSG00000198000NOL810088.372ENSCCAG00000026399NOL810088.372Cebus_capucinus
ENSG00000198000NOL810090.696ENSCATG00000035530NOL810090.553Cercocebus_atys
ENSG00000198000NOL89982.178ENSCATG00000038353-10074.615Cercocebus_atys
ENSG00000198000NOL810088.991ENSCLAG00000001434NOL810071.672Chinchilla_lanigera
ENSG00000198000NOL810076.106ENSCPBG00000006773NOL89943.189Chrysemys_picta_bellii
ENSG00000198000NOL810084.404ENSCANG00000032736-9885.922Colobus_angolensis_palliatus
ENSG00000198000NOL89889.267ENSCANG00000033400NOL89989.267Colobus_angolensis_palliatus
ENSG00000198000NOL89386.170ENSCGRG00001016459-10086.170Cricetulus_griseus_chok1gshd
ENSG00000198000NOL89386.170ENSCGRG00000016885-10086.170Cricetulus_griseus_crigri
ENSG00000198000NOL89758.163ENSCSEG00000012803-10058.511Cynoglossus_semilaevis
ENSG00000198000NOL88662.069ENSCVAG00000009871-9062.069Cyprinodon_variegatus
ENSG00000198000NOL810063.158ENSDARG00000044143nol87345.619Danio_rerio
ENSG00000198000NOL810086.538ENSDNOG00000019774NOL810073.035Dasypus_novemcinctus
ENSG00000198000NOL89387.234ENSDORG00000025458-10087.234Dipodomys_ordii
ENSG00000198000NOL89980.556ENSETEG00000016881NOL810060.051Echinops_telfairi
ENSG00000198000NOL89888.235ENSEASG00005013182NOL89983.721Equus_asinus_asinus
ENSG00000198000NOL810091.743ENSECAG00000022362NOL89974.915Equus_caballus
ENSG00000198000NOL810062.931ENSELUG00000015288nol85754.444Esox_lucius
ENSG00000198000NOL810091.743ENSFCAG00000000818NOL89982.946Felis_catus
ENSG00000198000NOL810069.565ENSFALG00000009066NOL89939.850Ficedula_albicollis
ENSG00000198000NOL89389.362ENSFDAG00000016216-10089.362Fukomys_damarensis
ENSG00000198000NOL89167.391ENSFHEG00000017935-9567.391Fundulus_heteroclitus
ENSG00000198000NOL810067.257ENSGALG00000004750NOL89941.876Gallus_gallus
ENSG00000198000NOL89163.043ENSGAFG00000001708-8463.043Gambusia_affinis
ENSG00000198000NOL810058.824ENSGACG00000004077nol89935.397Gasterosteus_aculeatus
ENSG00000198000NOL88361.905ENSGAGG00000004839-8361.905Gopherus_agassizii
ENSG00000198000NOL87366.667ENSGAGG00000010376-7770.492Gopherus_agassizii
ENSG00000198000NOL89155.435ENSGAGG00000001685-8555.435Gopherus_agassizii
ENSG00000198000NOL87267.742ENSGAGG00000002984-8167.742Gopherus_agassizii
ENSG00000198000NOL88358.333ENSGAGG00000002268-9054.945Gopherus_agassizii
ENSG00000198000NOL87266.129ENSGAGG00000002259-7770.149Gopherus_agassizii
ENSG00000198000NOL89183.696ENSGGOG00000023838-9878.788Gorilla_gorilla
ENSG00000198000NOL810066.923ENSGGOG00000025612NOL810066.923Gorilla_gorilla
ENSG00000198000NOL810057.627ENSHBUG00000014394nol87248.485Haplochromis_burtoni
ENSG00000198000NOL89084.615ENSHGLG00000001400-5584.615Heterocephalus_glaber_female
ENSG00000198000NOL89490.526ENSHGLG00000010060-10090.426Heterocephalus_glaber_female
ENSG00000198000NOL89084.615ENSHGLG00100012643-5584.615Heterocephalus_glaber_male
ENSG00000198000NOL89389.362ENSHGLG00100002570-9881.395Heterocephalus_glaber_male
ENSG00000198000NOL89389.362ENSHGLG00100012858-10089.362Heterocephalus_glaber_male
ENSG00000198000NOL810057.983ENSHCOG00000012856nol89852.941Hippocampus_comes
ENSG00000198000NOL810066.667ENSIPUG00000010933nol89938.386Ictalurus_punctatus
ENSG00000198000NOL810090.411ENSSTOG00000015195NOL810073.680Ictidomys_tridecemlineatus
ENSG00000198000NOL89585.417ENSJJAG00000011518-10080.620Jaculus_jaculus
ENSG00000198000NOL810060.169ENSKMAG00000015508-8140.185Kryptolebias_marmoratus
ENSG00000198000NOL810058.475ENSLBEG00000026169nol87247.181Labrus_bergylta
ENSG00000198000NOL89364.894ENSLACG00000018898NOL810038.707Latimeria_chalumnae
ENSG00000198000NOL810071.053ENSLOCG00000013864nol89938.405Lepisosteus_oculatus
ENSG00000198000NOL810085.321ENSLAFG00000002184NOL810069.679Loxodonta_africana
ENSG00000198000NOL810087.156ENSMFAG00000031716-10076.746Macaca_fascicularis
ENSG00000198000NOL810098.462ENSMFAG00000034500NOL810098.462Macaca_fascicularis
ENSG00000198000NOL810098.462ENSMMUG00000004629NOL810098.462Macaca_mulatta
ENSG00000198000NOL810087.156ENSMMUG00000039189-10076.320Macaca_mulatta
ENSG00000198000NOL810087.156ENSMNEG00000005430-9987.379Macaca_nemestrina
ENSG00000198000NOL810098.462ENSMNEG00000036927NOL810098.462Macaca_nemestrina
ENSG00000198000NOL810075.097ENSMLEG00000035584-10073.362Mandrillus_leucophaeus
ENSG00000198000NOL810096.154ENSMLEG00000037641NOL810096.154Mandrillus_leucophaeus
ENSG00000198000NOL89362.766ENSMAMG00000000989-10062.766Mastacembelus_armatus
ENSG00000198000NOL810057.627ENSMZEG00005017111nol88043.805Maylandia_zebra
ENSG00000198000NOL810066.087ENSMGAG00000004495NOL810041.920Meleagris_gallopavo
ENSG00000198000NOL89386.170ENSMAUG00000008173-10086.170Mesocricetus_auratus
ENSG00000198000NOL810086.986ENSMICG00000014322NOL810079.912Microcebus_murinus
ENSG00000198000NOL89387.234ENSMOCG00000008757-10087.234Microtus_ochrogaster
ENSG00000198000NOL89361.702ENSMMOG00000013534-10057.692Mola_mola
ENSG00000198000NOL810072.807ENSMODG00000020877-10043.390Monodelphis_domestica
ENSG00000198000NOL88664.368ENSMALG00000022669-9362.222Monopterus_albus
ENSG00000198000NOL810089.908MGP_CAROLIEiJ_G0018509Nol89863.265Mus_caroli
ENSG00000198000NOL810089.908ENSMUSG00000021392Nol810084.946Mus_musculus
ENSG00000198000NOL810090.826MGP_PahariEiJ_G0019575Nol89863.032Mus_pahari
ENSG00000198000NOL810089.908MGP_SPRETEiJ_G0019389Nol89863.127Mus_spretus
ENSG00000198000NOL810088.991ENSMPUG00000004748NOL810066.610Mustela_putorius_furo
ENSG00000198000NOL810087.387ENSMLUG00000015204NOL810071.963Myotis_lucifugus
ENSG00000198000NOL89385.106ENSNGAG00000021592-10085.106Nannospalax_galili
ENSG00000198000NOL89061.957ENSNBRG00000012679-7061.957Neolamprologus_brichardi
ENSG00000198000NOL810097.692ENSNLEG00000016357NOL810097.692Nomascus_leucogenys
ENSG00000198000NOL89782.653ENSNLEG00000028854-10070.769Nomascus_leucogenys
ENSG00000198000NOL89886.275ENSOPRG00000003268NOL88874.468Ochotona_princeps
ENSG00000198000NOL810059.322ENSONIG00000000491nol89755.909Oreochromis_niloticus
ENSG00000198000NOL810091.892ENSOCUG00000008053-10065.487Oryctolagus_cuniculus
ENSG00000198000NOL810060.169ENSORLG00000019906nol86055.556Oryzias_latipes
ENSG00000198000NOL810061.017ENSORLG00020010643nol89934.197Oryzias_latipes_hni
ENSG00000198000NOL810061.017ENSORLG00015007152nol86056.481Oryzias_latipes_hsok
ENSG00000198000NOL810063.559ENSOMEG00000003904nol88641.646Oryzias_melastigma
ENSG00000198000NOL810091.781ENSOGAG00000015009-10075.063Otolemur_garnettii
ENSG00000198000NOL810088.356ENSOARG00000008299NOL810073.021Ovis_aries
ENSG00000198000NOL8100100.000ENSPPAG00000002204NOL810099.231Pan_paniscus
ENSG00000198000NOL810091.743ENSPPRG00000008693NOL89983.721Panthera_pardus
ENSG00000198000NOL810091.743ENSPTIG00000015402NOL89982.171Panthera_tigris_altaica
ENSG00000198000NOL8100100.000ENSPTRG00000021109NOL8100100.000Pan_troglodytes
ENSG00000198000NOL89389.362ENSPANG00000033194-9386.275Papio_anubis
ENSG00000198000NOL810086.897ENSPANG00000031553-9977.901Papio_anubis
ENSG00000198000NOL810098.020ENSPANG00000024725NOL810098.020Papio_anubis
ENSG00000198000NOL810067.544ENSPKIG00000025150nol86744.940Paramormyrops_kingsleyae
ENSG00000198000NOL810074.336ENSPSIG00000013948NOL89942.716Pelodiscus_sinensis
ENSG00000198000NOL88662.069ENSPMGG00000014670-8651.695Periophthalmus_magnuspinnatus
ENSG00000198000NOL810089.565ENSPEMG00000012756Nol810086.170Peromyscus_maniculatus_bairdii
ENSG00000198000NOL810061.017ENSPFOG00000002057nol86055.328Poecilia_formosa
ENSG00000198000NOL89166.304ENSPLAG00000008235-9966.304Poecilia_latipinna
ENSG00000198000NOL89166.304ENSPMEG00000006567-9966.304Poecilia_mexicana
ENSG00000198000NOL89164.130ENSPREG00000010175-9564.130Poecilia_reticulata
ENSG00000198000NOL8100100.000ENSPPYG00000019375NOL810097.006Pongo_abelii
ENSG00000198000NOL810073.874ENSPCAG00000004501NOL810059.573Procavia_capensis
ENSG00000198000NOL810092.661ENSPCOG00000020573-10081.857Propithecus_coquereli
ENSG00000198000NOL87886.567ENSPVAG00000010582NOL87777.778Pteropus_vampyrus
ENSG00000198000NOL89060.870ENSPNYG00000002021-8660.870Pundamilia_nyererei
ENSG00000198000NOL810088.991ENSRNOG00000045569Nol89862.022Rattus_norvegicus
ENSG00000198000NOL89890.196ENSRNOG00000046968Nol89861.885Rattus_norvegicus
ENSG00000198000NOL810083.448ENSRBIG00000011855-8787.000Rhinopithecus_bieti
ENSG00000198000NOL810091.096ENSRBIG00000036444NOL810091.667Rhinopithecus_bieti
ENSG00000198000NOL810096.154ENSRROG00000043673NOL810096.154Rhinopithecus_roxellana
ENSG00000198000NOL89881.373ENSRROG00000033368-8786.000Rhinopithecus_roxellana
ENSG00000198000NOL810096.040ENSSBOG00000024228NOL810096.040Saimiri_boliviensis_boliviensis
ENSG00000198000NOL810067.257ENSSFOG00015002403nol89936.201Scleropages_formosus
ENSG00000198000NOL89262.766ENSSMAG00000004064-9962.766Scophthalmus_maximus
ENSG00000198000NOL810060.169ENSSDUG00000019240nol85545.994Seriola_dumerili
ENSG00000198000NOL89361.702ENSSLDG00000007021-9761.702Seriola_lalandi_dorsalis
ENSG00000198000NOL89886.275ENSSARG00000010607-8282.317Sorex_araneus
ENSG00000198000NOL810076.106ENSSPUG00000002744NOL89941.612Sphenodon_punctatus
ENSG00000198000NOL810057.627ENSSPAG00000019982nol89935.469Stegastes_partitus
ENSG00000198000NOL810089.908ENSSSCG00000008069NOL810073.061Sus_scrofa
ENSG00000198000NOL810056.780ENSTRUG00000009278nol89553.271Takifugu_rubripes
ENSG00000198000NOL89858.621ENSTNIG00000002673-9754.630Tetraodon_nigroviridis
ENSG00000198000NOL89888.235ENSTBEG00000014187NOL89265.889Tupaia_belangeri
ENSG00000198000NOL810084.828ENSTTRG00000008244NOL810074.298Tursiops_truncatus
ENSG00000198000NOL810088.991ENSUAMG00000013803NOL810065.277Ursus_americanus
ENSG00000198000NOL810088.991ENSUMAG00000015496NOL810065.021Ursus_maritimus
ENSG00000198000NOL810087.387ENSVVUG00000005127NOL810065.106Vulpes_vulpes
ENSG00000198000NOL810068.142ENSXETG00000020913nol89940.295Xenopus_tropicalis
ENSG00000198000NOL89160.870ENSXMAG00000027913-8460.870Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0005515protein binding11073942.14660641.16963496.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus14660641.15132771.16963496.IDAComponent
GO:0006364rRNA processing16963496.IMPProcess
GO:1902570protein localization to nucleolus16963496.IMPProcess
GO:1990904ribonucleoprotein complex21873635.IBAComponent

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