EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact
  • Basic Information
  • Cancer Related Information

  • Description
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000198919 (Gene tree)
Gene ID
9666
Gene Symbol
DZIP3
Alias
HRUL138|UURF2
Full Name
DAZ Interacting Zinc Finger Protein 3
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
105,357 bases
Position
chr3:108,589,490-108,694,846
Accession
30938
RBP type
non-canonical RBP
Summary
DZIP3 (DAZ Interacting Zinc Finger Protein 3) is a Protein Coding gene. Among its related pathways are Innate Immune System and Class I MHC mediated antigen processing and presentation. Gene Ontology (GO) annotations related to this gene include ligase activity. An important paralog of this gene is RNF145.

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
12538761hRUL138, a novel human RNA-binding RING-H2 ubiquitin-protein ligase.J Cell Sci2003 Feb 15Kreft SG-
24326307Scaffold function of long non-coding RNA HOTAIR in protein ubiquitination.Nat Commun2013Yoon JHdoi: 10.1038/ncomms3939.
29812999Generation of Rat Monoclonal Antibodies Specific for DZIP3.Monoclon Antib Immunodiagn Immunother2018 JunOikawa Ddoi: 10.1089/mab.2018.0005
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000479138DZIP3-2032076-ENSP00000418115654 (aa)-C9J9M8
ENST00000463306DZIP3-2024246XM_005247915ENSP000004199811208 (aa)XP_005247972Q86Y13
ENST00000361582DZIP3-2015350XM_005247914ENSP000003550281208 (aa)XP_005247971Q86Y13
ENST00000486815DZIP3-204705-ENSP00000420030126 (aa)-C9JRX4
ENST00000495008DZIP3-2055164-ENSP00000418871303 (aa)-Q86Y13
ENST00000497905DZIP3-206576-ENSP0000041782971 (aa)-C9J702
Gene Model
Click here to download ENSG00000198919's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000198919Bronchial Provocation Tests2E-625514360
ENSG00000198919Pulmonary Disease, Chronic Obstructive2E-625514360
ENSG00000198919Bronchial Provocation Tests3E-625514360
ENSG00000198919Pulmonary Disease, Chronic Obstructive3E-625514360
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000198919's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000209protein polyubiquitination21873635.IBAProcess
GO:0000209protein polyubiquitination12538761.IDAProcess
GO:0003723RNA binding22658674.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003723RNA binding12538761.IDAFunction
GO:0004842ubiquitin-protein transferase activity21873635.IBAFunction
GO:0004842ubiquitin-protein transferase activity12538761.IDAFunction
GO:0005515protein binding21903422.25416956.IPIFunction
GO:0005737cytoplasm21873635.IBAComponent
GO:0005737cytoplasm12538761.IDAComponent
GO:0019902phosphatase binding19389623.IDAFunction
GO:0031593polyubiquitin modification-dependent protein binding21873635.IBAFunction
GO:0031593polyubiquitin modification-dependent protein binding12538761.IDAFunction
GO:0046872metal ion binding-IEAFunction
GO:0061630ubiquitin protein ligase activity-IEAFunction

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr3108688620Missense_MutationnovelN1100D0.54
BLCAchr3108688638Missense_MutationnovelH1106Y0.31
BLCAchr3108688922Nonsense_MutationNAQ1172*0.41
BLCAchr3108636690SilentNAP331P0.14
BLCAchr3108688604SilentNAK1094K0.41
BLCAchr3108644265Missense_MutationnovelA415T0.46
BLCAchr3108624507Missense_MutationNAE147K0.25
BLCAchr3108644712Nonsense_MutationnovelQ564*0.19
BLCAchr3108636655Missense_MutationnovelG320S0.2
BLCAchr3108661881Missense_Mutationrs139764708S735L0.24
BLCAchr3108684313Missense_MutationNAS994F0.19
BLCAchr3108629156Missense_MutationNAD226N0.32
BLCAchr3108644567Missense_MutationnovelE515D0.06
BLCAchr3108636665Missense_MutationnovelV323A0.18
BRCAchr3108648918Missense_MutationNAV655L0.25
BRCAchr3108688871SilentNAL1155L0.21
BRCAchr3108675832Missense_MutationnovelA914S0.07
BRCAchr3108616640Missense_MutationNAQ120E0.37
BRCAchr3108642485Missense_MutationNAP371L0.35
BRCAchr3108636633Missense_MutationNAK312N0.22
BRCAchr3108688829Nonsense_MutationnovelE1141*0.08
BRCAchr3108625893Nonsense_MutationNAQ169*0.17
BRCAchr3108684282Missense_MutationNAQ984E0.2
CESCchr3108642455Missense_MutationNAS361C0.16
CESCchr3108636706Missense_MutationNAL337V0.4
CESCchr3108684249Nonsense_MutationNAE973*0.29
CESCchr3108605332Splice_Regionnovel0.18
CESCchr3108648056Missense_MutationNAD636Y0.14
CESCchr3108633035Missense_MutationNAS260F0.38
CESCchr3108688649SilentnovelS1109S0.36
CESCchr3108646632Nonsense_MutationnovelS592*0.27
CESCchr3108672653Silentrs184330557A862A0.44
CESCchr3108674117Missense_MutationnovelH877N0.27
COADchr3108654206Missense_MutationNAS699G0.37
COADchr3108675815Missense_Mutationrs147602420A908V0.4
COADchr3108642489Missense_Mutationrs750801116K372N0.09
COADchr3108661903SilentnovelD742D0.13
COADchr3108688014Missense_MutationnovelA1063V0.25
COADchr3108644309Missense_MutationNAK429N0.36
COADchr3108634931Frame_Shift_DelNAK294Sfs*50.43
COADchr3108688710Missense_MutationnovelA1130T0.05
COADchr3108644471Frame_Shift_InsNAG486Rfs*100.41
COADchr3108611178Missense_MutationNAK36T0.09
COADchr3108644570SilentNAI516I0.27
COADchr3108654221Missense_MutationNAD704Y0.15
COADchr3108687994Missense_MutationNAF1056L0.36
COADchr3108642495Nonsense_MutationnovelL375Qfs*40.04
COADchr3108688098Splice_SiteNAX1090_splice0.21
ESCAchr3108644256Missense_Mutationrs201610955F412L0.16
ESCAchr3108634926Missense_MutationNAC291F0.13
ESCAchr3108691037Intronnovel0.16
ESCAchr3108608120Nonsense_MutationnovelE22*0.28
GBMchr3108629155SilentnovelE225E0.1
GBMchr3108654233Missense_MutationnovelD708Y0.43
GBMchr3108672612Missense_Mutationrs202141071V849I0.07
GBMchr3108654229SilentnovelA706A0.2
GBMchr3108634872Missense_MutationNAG273V0.59
GBMchr3108677519Missense_MutationnovelN935T0.08
GBMchr3108611246Missense_MutationnovelN59D0.08
GBMchr3108688642Frame_Shift_DelnovelS1107Ffs*430.11
HNSCchr3108636637Missense_MutationnovelL314M0.08
HNSCchr3108654197Missense_MutationNAH696Y0.14
HNSCchr3108672627Missense_Mutationrs773671554A854T0.27
HNSCchr3108636639Missense_MutationnovelL314F0.15
HNSCchr3108661964Nonsense_MutationnovelQ763*0.28
HNSCchr3108644429SilentnovelL469L0.05
HNSCchr3108625938Nonsense_MutationnovelG184*0.14
HNSCchr3108634926Missense_MutationNAC291F0.22
HNSCchr3108654163Missense_MutationnovelK684N0.48
HNSCchr3108648077Missense_MutationnovelE643K0.26
HNSCchr3108608138Missense_MutationnovelE28Q0.2
HNSCchr3108674168Missense_MutationnovelH894D0.19
HNSCchr3108684245SilentnovelV971V0.22
HNSCchr3108654207Missense_MutationnovelS699N0.44
HNSCchr3108616591SilentnovelL103L0.24
HNSCchr3108605419Missense_MutationnovelP5A0.13
KIRCchr3108688094Nonsense_MutationnovelQ1090*0.26
KIRPchr3108605428Frame_Shift_DelNAF9Lfs*20.2
LGGchr3108616557Missense_MutationNAN92S0.23
LGGchr3108644756Missense_MutationnovelQ578H0.06
LGGchr3108648004SilentnovelY618Y0.1
LGGchr3108688891SilentnovelS1161S0.06
LIHCchr3108686586Splice_SitenovelX1050_splice0.26
LIHCchr3108629106Missense_MutationNAI209T0.19
LIHCchr3108644482Nonsense_MutationNAW487*0.07
LIHCchr3108647968Missense_Mutationrs779807969N606K0.08
LIHCchr3108688868Missense_MutationnovelN1154Y0.47
LIHCchr3108654264Missense_MutationnovelK718R0.18
LIHCchr3108654197Missense_MutationNAH696Y0.29
LIHCchr3108688903Silentrs200425501C1165C0.38
LIHCchr3108661915SilentnovelT746T0.38
LUADchr3108674123Nonsense_MutationNAE879*0.57
LUADchr3108684232Missense_MutationnovelG967V0.11
LUADchr3108644678Missense_Mutationrs145724685E552D0.3
LUADchr3108688701Missense_MutationNAQ1127K0.2
LUADchr3108669700Missense_MutationnovelA815P0.26
LUADchr3108644206Missense_Mutationrs762057179H395R0.23
LUADchr3108661957Missense_MutationNAL760F0.12
LUADchr3108644580Missense_MutationNAG520C0.28
LUADchr3108688001Missense_MutationnovelK1059E0.23
LUADchr3108636669Missense_MutationNAR324S0.24
LUADchr3108675797Nonsense_MutationNAS902*0.25
LUADchr3108690914Intronnovel0.25
LUADchr3108625892Silentrs140722866I168I0.22
LUADchr3108611288Nonsense_MutationnovelK73*0.2
LUADchr3108624524Missense_MutationnovelE152D0.5
LUADchr3108624449Missense_MutationnovelH127Q0.14
LUADchr3108672603Missense_MutationNAK846E0.24
LUADchr3108644418Missense_MutationNAD466H0.31
LUADchr3108677547Missense_MutationnovelS944R0.26
LUADchr3108684274Missense_MutationNAT981I0.47
LUADchr3108684283Frame_Shift_DelnovelM985Cfs*190.17
LUADchr3108688687Missense_MutationnovelR1122K0.49
LUADchr3108648019SilentnovelK623K0.57
LUADchr3108644386Missense_MutationNAP455H0.18
LUADchr3108636661Missense_MutationNAM322L0.07
LUADchr3108686540Missense_MutationnovelE1035D0.4
LUADchr3108648000Frame_Shift_DelnovelE617Gfs*40.14
LUADchr3108634970Nonsense_MutationNAQ306*0.24
LUADchr3108644206Missense_MutationNAH395L0.26
LUADchr3108634926Missense_MutationNAC291F0.29
LUADchr3108684276Missense_Mutationrs148202329V982L0.41
LUADchr3108648060Missense_MutationNAG637V0.07
LUADchr3108608157Missense_MutationnovelL34Q0.06
LUSCchr3108608148Missense_MutationNAS31C0.3
LUSCchr3108684230SilentnovelL966L0.15
LUSCchr3108690828SilentNAT1186T0.23
LUSCchr3108688704Missense_MutationnovelG1128C0.5
LUSCchr3108605418SilentnovelL4L0.15
LUSCchr3108684218Missense_MutationNAM962I0.4
LUSCchr3108684282Missense_MutationNAQ984E0.41
LUSCchr3108675844Missense_MutationNAD918N0.27
LUSCchr3108674076Splice_SitenovelX864_splice0.22
LUSCchr3108684299Frame_Shift_DelnovelP990Rfs*140.46
LUSCchr3108633049Missense_MutationnovelI265V0.32
LUSCchr3108672650SilentnovelT861T0.43
LUSCchr3108672621Missense_MutationNAL852M0.21
LUSCchr3108684306Missense_MutationnovelV992I0.55
LUSCchr3108611203Silentrs749896290D44D0.09
LUSCchr3108654178SilentnovelR689R0.07
LUSCchr3108684337Missense_MutationnovelP1002L0.32
LUSCchr3108648053Frame_Shift_DelnovelD636Mfs*470.36
LUSCchr3108644349Missense_MutationnovelH443Y0.21
LUSCchr3108634967Missense_MutationnovelD305H0.41
LUSCchr3108644412Nonsense_MutationNAQ464*0.09
LUSCchr3108611171Splice_Regionnovel0.28
LUSCchr31086053605'UTRnovel0.43
LUSCchr3108677553Missense_MutationnovelL946F0.3
LUSCchr3108690886Missense_Mutationrs764802925P1206S0.13
LUSCchr3108654219Missense_MutationNAK703I0.22
LUSCchr3108644247Missense_MutationnovelR409G0.11
LUSCchr3108644394Nonsense_MutationnovelE458*0.43
LUSCchr3108661886Missense_MutationnovelG737S0.4
LUSCchr3108654186Missense_MutationnovelQ692R0.24
LUSCchr3108674089Missense_MutationnovelL867F0.13
LUSCchr3108644710Missense_MutationnovelH563R0.47
LUSCchr3108625856SilentnovelE156E0.16
LUSCchr3108688079Missense_MutationNAD1085N0.2
LUSCchr3108624449Missense_MutationnovelH127Q0.33
LUSCchr3108642469Missense_MutationnovelD366N0.3
LUSCchr3108644410Missense_MutationNAK463I0.5
LUSCchr3108661926Missense_MutationnovelR750M0.13
LUSCchr3108674163Missense_MutationnovelV892G0.27
OVchr3108688590Splice_Regionnovel0.13
OVchr3108648064SilentnovelT638T0.07
OVchr3108672626Silentrs371315606N853N0.09
OVchr3108688891In_Frame_InsnovelS1161_V1162insF0.04
OVchr3108691053Intronnovel0.38
OVchr3108608087Splice_SitenovelX11_splice0.05
PAADchr3108616564SilentnovelQ94Q0.19
PAADchr3108644591SilentnovelE523E0.03
PAADchr3108648046Missense_MutationnovelE632D0.19
PAADchr3108662239Missense_MutationnovelG802E0.12
PRADchr3108672626Silentrs371315606N853N0.34
PRADchr3108644401Missense_Mutationrs767368068P460L0.21
PRADchr3108629149SilentNAE223E0.08
PRADchr3108644783Splice_SitenovelX587_splice0.5
READchr3108611307Missense_MutationNAD79G0.24
READchr3108605428Frame_Shift_DelNAF9Lfs*20.27
READchr3108634874Frame_Shift_DelnovelQ276Sfs*20.22
READchr3108662239Missense_MutationnovelG802E0.37
READchr3108648037Missense_MutationnovelQ629H0.06
READchr3108611244Missense_MutationNAL58S0.15
READchr3108616544Nonsense_MutationNAE88*0.42
READchr3108634901Missense_MutationNAC283R0.32
READchr3108644201Missense_MutationnovelF393L0.21
SARCchr3108687999Missense_Mutationrs138409858R1058Q0.36
SARCchr3108642463Missense_MutationnovelI364V0.48
SKCMchr3108634868Splice_Regionnovel0.39
SKCMchr3108644696SilentnovelI558I0.26
SKCMchr3108654220In_Frame_InsnovelD705dup0.06
SKCMchr3108644205Missense_MutationNAH395Y0.24
SKCMchr3108690824Missense_MutationNAP1185L0.33
SKCMchr3108644337Missense_MutationNAL439F0.9
SKCMchr3108644182Missense_MutationNAK387M0.47
SKCMchr3108644292Missense_MutationnovelE424K0.42
SKCMchr3108677557Missense_MutationNAP948S0.21
SKCMchr3108644631Missense_MutationnovelL537F0.16
SKCMchr3108688848Missense_MutationNAP1147L0.12
SKCMchr3108688069SilentNAS1081S0.09
SKCMchr3108644462SilentNAF480F0.32
SKCMchr3108672557Splice_Regionnovel0.19
SKCMchr3108611314SilentNAS81S0.2
SKCMchr3108644528SilentnovelI502I0.18
SKCMchr3108661937Nonsense_MutationNAQ754*0.35
SKCMchr3108644684SilentNAP554P0.19
SKCMchr3108634915SilentnovelF287F0.28
SKCMchr3108644345Silentrs149165938T441T0.43
SKCMchr3108686520Missense_MutationNAP1029S0.6
SKCMchr3108644698Missense_MutationNAS559F0.69
SKCMchr3108661876Splice_SiteNAX734_splice0.24
SKCMchr3108616574Missense_MutationnovelE98K0.07
STADchr3108669689Missense_Mutationrs756611569R811H0.29
STADchr3108644749Missense_MutationNAI576T0.09
STADchr3108675802Missense_MutationnovelQ904K0.31
STADchr3108686475Missense_MutationNAP1014S0.35
STADchr3108661927SilentNAR750R0.25
STADchr3108669706Missense_MutationNAD817Y0.33
STADchr31086053815'UTRnovel0.08
STADchr3108648096Missense_MutationNAL649P0.09
STADchr3108674082Missense_MutationNAY865F0.06
STADchr3108644495Silentrs761465822P491P0.08
STADchr3108690840Silentrs141475495H1190H0.36
STADchr3108690878Missense_Mutationrs367842769R1203Q0.33
STADchr3108686486Silentrs749659882D1017D0.16
STADchr3108644665Missense_MutationNAD548G0.38
STADchr3108654236Missense_MutationNAV709L0.09
STADchr3108644414SilentNAQ464Q0.17
STADchr3108661922Missense_MutationNAE749K0.35
THCAchr3108686543SilentNAR1036R0.14
THYMchr3108654311Splice_SitenovelX733_splice0.11
UCECchr3108674157Missense_MutationNAA890V0.3
UCECchr3108611196Missense_MutationnovelP42H0.42
UCECchr3108690906Splice_Regionrs3762498080.14
UCECchr3108654218Missense_MutationNAK703Q0.3
UCECchr3108654264Missense_MutationnovelK718R0.32
UCECchr3108646635Missense_MutationNAI593T0.39
UCECchr3108625954Missense_Mutationrs767859352R189Q0.39
UCECchr3108642494Missense_MutationnovelS374I0.39
UCECchr3108644244Missense_MutationnovelV408I0.42
UCECchr3108686474Silentrs781438178A1013A0.37
UCECchr3108654154SilentnovelV681V0.3
UCECchr3108677517Frame_Shift_DelnovelN935Kfs*80.24
UCECchr3108642486SilentnovelP371P0.24
UCECchr31086053745'UTRnovel0.2
UCECchr3108636694Missense_MutationnovelI333L0.11
UCECchr3108644216SilentNAH398H0.12
UCECchr3108634935Missense_MutationNAK294R0.43
UCECchr3108646650Splice_Siters142229557X598_splice0.24
UCECchr3108611270Missense_Mutationrs745923043G67C0.21
UCECchr3108644645Silentrs565086947G541G0.19
UCECchr3108686576Missense_MutationnovelQ1047H0.21
UCECchr3108611236Missense_MutationnovelK55N0.13
UCECchr3108644309Missense_MutationNAK429N0.62
UCECchr3108644402Silentrs199527435P460P0.22
UCECchr3108690800Nonsense_MutationnovelW1177*0.39
UCECchr3108684334Frame_Shift_DelnovelL1003*0.34
UCECchr3108625867Missense_MutationnovelK160T0.09
UCECchr3108644280Missense_MutationnovelL420I0.43
UCECchr3108637541Nonsense_MutationnovelG353*0.5
UCECchr3108654260Missense_MutationnovelD717Y0.39
UCECchr3108690833Missense_MutationnovelR1188I0.44
UCECchr31086054055'UTRrs1487976230.33
UCECchr3108636627SilentnovelG310G0.26
UCECchr3108662195Missense_MutationNAK787N0.35
UCECchr3108644248Missense_Mutationrs377325943R409Q0.31
UCECchr3108648104Missense_MutationnovelL652I0.29
UCECchr3108611331Splice_SitenovelX86_splice0.28
UCECchr3108691028Intronnovel0.36
UCECchr3108644494Missense_Mutationrs773750250P491L0.32
UCECchr3108633006Silentrs750609461T250T0.27
UCECchr3108644225SilentnovelI401I0.54
UCECchr3108672626Silentrs371315606N853N0.42
UCECchr3108632995Missense_MutationnovelM247L0.26
UCECchr3108648006Missense_MutationnovelN619S0.43
UCECchr3108691046Intronnovel0.39
UCECchr3108687980Missense_MutationnovelE1052K0.24
UCECchr3108690856Nonsense_MutationnovelE1196*0.25
UCECchr3108636642Missense_MutationnovelK315N0.42
UCECchr3108644199Missense_MutationnovelF393V0.37
UCECchr3108672611Silentrs373711969Y848Y0.44
UCECchr3108688087Missense_MutationnovelK1087N0.41
UCECchr3108624508Missense_MutationnovelE147G0.05
UCECchr3108634942Missense_MutationNAK296N0.18
UCECchr3108684249Nonsense_MutationNAE973*0.06
UCECchr3108611243Missense_MutationnovelL58V0.21
UCECchr3108690906Splice_Regionrs3762498080.23
UCECchr3108616587Missense_MutationnovelA102D0.22
UCECchr3108688905Missense_MutationnovelA1166V0.3
UCECchr3108669693Missense_MutationNAQ812H0.45
UCECchr3108690980Intronnovel0.21
UCECchr3108642499Missense_MutationNAK376Q0.58
UCECchr3108648944SilentNAK663K0.24
UCECchr3108669706Missense_MutationNAD817Y0.16
UCECchr3108662140Missense_MutationnovelR769I0.46
UCECchr3108646650Splice_Siters142229557X598_splice0.34
UCECchr3108648101Missense_MutationnovelD651Y0.21
UCECchr3108669688Missense_Mutationrs149807869R811C0.15
UCECchr3108691124Intronnovel0.35
UCECchr3108688738Splice_SitenovelX1138_splice0.36
UCECchr3108644427Missense_MutationnovelL469I0.06
UCECchr31086053785'UTRnovel0.44
UCECchr3108688020Missense_MutationnovelG1065V0.37
UCECchr3108688652Missense_MutationnovelQ1110H0.28
UCSchr3108654189Missense_MutationnovelA693E0.4

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
KIRCDEL0.25380.11092
LGGDEL0.06040.04374
TGCTAMP0.15330.23596

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

SARC0.023

Kaplan-Meier Survival Analysis

SKCM0.00011

Kaplan-Meier Survival Analysis

PAAD0.0029

Kaplan-Meier Survival Analysis

KICH0.047

Kaplan-Meier Survival Analysis

UCEC0.03

Kaplan-Meier Survival Analysis

DLBC0.019

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

CHOL0.021

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us