EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000204438 (Gene tree)
Gene ID: 7918
Gene Symbol: GPANK1
Alias: G5|D6S54E|GPATCH10|ANKRD59|BAT4
Full Name: G-patch domain and ankyrin repeats 1
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 5,055 bases
Position: chr6:31,661,229-31,666,283
Accession: 13920
RBP type: canonical RBP
Summary: This gene is located in a cluster of HLA-B-associated transcripts, which is included in the human major histocompatability complex III region. This gene encodes a protein which is thought to play a role in immunity. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Nov 2010]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000365057	G-patch	PF01585.23	5.5e-12	1	1
ENSP00000365059	G-patch	PF01585.23	5.5e-12	1	1
ENSP00000365060	G-patch	PF01585.23	5.5e-12	1	1
ENSP00000365065	G-patch	PF01585.23	5.5e-12	1	1
ENSP00000365071	G-patch	PF01585.23	5.5e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000445768	GPANK1-206	822	-	ENSP00000409349	152 (aa)	-	F6QYZ9
ENST00000456540	GPANK1-207	627	-	ENSP00000395484	89 (aa)	-	A0A0A0MSL5
ENST00000375906	GPANK1-205	2793	XM_005249403	ENSP00000365071	356 (aa)	XP_005249460	O95872
ENST00000375900	GPANK1-204	1814	-	ENSP00000365065	356 (aa)	-	O95872
ENST00000375893	GPANK1-201	1598	-	ENSP00000365057	356 (aa)	-	O95872
ENST00000375895	GPANK1-202	1800	-	ENSP00000365059	356 (aa)	-	O95872
ENST00000375896	GPANK1-203	1910	XM_006715204	ENSP00000365060	356 (aa)	XP_006715267	O95872
ENST00000458083	GPANK1-208	802	-	ENSP00000395307	164 (aa)	-	A0A0A0MSL4

Gene Model

Click here to download ENSG00000204438's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000204438	Lupus Erythematosus, Systemic	9.992E-16	18204098
ENSG00000204438	Platelet Function Tests	7.2800000E-006	-
ENSG00000204438	Glomerulonephritis, Membranous	2E-56	21323541
ENSG00000204438	Seizures, Febrile	2E-7	25344690

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000204438	rs3130618	6	31664357	A	Idiopathic membranous nephropathy	21323541	[NR]	3.03	EFO_0004254
ENSG00000204438	rs3130618	6	31664357	C	Febrile seizures (MMR vaccine-related)	25344690	[1.20-1.49]	1.34	EFO_0006519

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000204438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000204438	GPANK1	97	36.188	ENSAPOG00000010685	-	98	35.870	Acanthochromis_polyacanthus
ENSG00000204438	GPANK1	97	36.188	ENSAPOG00000014355	-	98	35.870	Acanthochromis_polyacanthus
ENSG00000204438	GPANK1	100	82.303	ENSAMEG00000009290	GPANK1	94	84.270	Ailuropoda_melanoleuca
ENSG00000204438	GPANK1	97	34.946	ENSAOCG00000024034	GPANK1	99	36.074	Amphiprion_ocellaris
ENSG00000204438	GPANK1	97	35.967	ENSAPEG00000000530	GPANK1	99	37.669	Amphiprion_percula
ENSG00000204438	GPANK1	98	35.411	ENSATEG00000008243	-	98	36.517	Anabas_testudineus
ENSG00000204438	GPANK1	100	91.944	ENSANAG00000026356	GPANK1	100	93.333	Aotus_nancymaae
ENSG00000204438	GPANK1	89	38.344	ENSACLG00000001320	GPANK1	98	38.983	Astatotilapia_calliptera
ENSG00000204438	GPANK1	97	36.872	ENSAMXG00000012581	-	85	37.989	Astyanax_mexicanus
ENSG00000204438	GPANK1	100	82.303	ENSBTAG00000008835	GPANK1	100	82.303	Bos_taurus
ENSG00000204438	GPANK1	59	30.841	WBGene00014256	ZK1320.7	56	30.841	Caenorhabditis_elegans
ENSG00000204438	GPANK1	100	93.277	ENSCJAG00000003002	GPANK1	100	93.838	Callithrix_jacchus
ENSG00000204438	GPANK1	100	83.989	ENSCAFG00000000601	GPANK1	100	83.989	Canis_familiaris
ENSG00000204438	GPANK1	100	83.989	ENSCAFG00020020706	GPANK1	100	83.989	Canis_lupus_dingo
ENSG00000204438	GPANK1	100	79.213	ENSCHIG00000024637	GPANK1	100	79.494	Capra_hircus
ENSG00000204438	GPANK1	100	86.236	ENSTSYG00000028288	GPANK1	100	86.236	Carlito_syrichta
ENSG00000204438	GPANK1	100	76.685	ENSCAPG00000005661	GPANK1	95	76.685	Cavia_aperea
ENSG00000204438	GPANK1	100	76.404	ENSCPOG00000031872	GPANK1	100	76.404	Cavia_porcellus
ENSG00000204438	GPANK1	100	92.222	ENSCCAG00000019583	GPANK1	100	92.222	Cebus_capucinus
ENSG00000204438	GPANK1	100	95.225	ENSCATG00000036761	GPANK1	100	95.225	Cercocebus_atys
ENSG00000204438	GPANK1	100	80.056	ENSCLAG00000014639	GPANK1	99	80.056	Chinchilla_lanigera
ENSG00000204438	GPANK1	100	95.506	ENSCSAG00000008570	GPANK1	100	95.506	Chlorocebus_sabaeus
ENSG00000204438	GPANK1	99	45.822	ENSCPBG00000014706	GPANK1	99	45.699	Chrysemys_picta_bellii
ENSG00000204438	GPANK1	100	95.225	ENSCANG00000038862	GPANK1	100	95.225	Colobus_angolensis_palliatus
ENSG00000204438	GPANK1	100	78.056	ENSCGRG00001007828	Gpank1	97	79.167	Cricetulus_griseus_chok1gshd
ENSG00000204438	GPANK1	100	78.056	ENSCGRG00000014676	Gpank1	100	79.167	Cricetulus_griseus_crigri
ENSG00000204438	GPANK1	98	35.422	ENSCVAG00000020672	-	98	36.111	Cyprinodon_variegatus
ENSG00000204438	GPANK1	100	35.792	ENSDARG00000053995	gpank1	99	36.585	Danio_rerio
ENSG00000204438	GPANK1	100	82.353	ENSDNOG00000018727	GPANK1	100	80.337	Dasypus_novemcinctus
ENSG00000204438	GPANK1	100	78.492	ENSDORG00000024662	Gpank1	100	79.609	Dipodomys_ordii
ENSG00000204438	GPANK1	100	75.978	ENSETEG00000015166	GPANK1	100	76.816	Echinops_telfairi
ENSG00000204438	GPANK1	100	83.427	ENSEASG00005016313	GPANK1	100	84.831	Equus_asinus_asinus
ENSG00000204438	GPANK1	100	84.551	ENSECAG00000019093	GPANK1	100	84.551	Equus_caballus
ENSG00000204438	GPANK1	96	35.072	ENSELUG00000009653	-	90	34.940	Esox_lucius
ENSG00000204438	GPANK1	100	84.551	ENSFCAG00000023899	GPANK1	100	84.551	Felis_catus
ENSG00000204438	GPANK1	100	80.618	ENSFDAG00000018857	GPANK1	100	80.337	Fukomys_damarensis
ENSG00000204438	GPANK1	98	37.741	ENSFHEG00000013343	-	99	37.741	Fundulus_heteroclitus
ENSG00000204438	GPANK1	97	39.118	ENSGMOG00000007797	GPANK1	98	37.057	Gadus_morhua
ENSG00000204438	GPANK1	100	36.813	ENSGAFG00000012817	-	98	36.957	Gambusia_affinis
ENSG00000204438	GPANK1	98	38.525	ENSGACG00000016703	-	98	38.211	Gasterosteus_aculeatus
ENSG00000204438	GPANK1	99	44.715	ENSGAGG00000011085	GPANK1	99	45.553	Gopherus_agassizii
ENSG00000204438	GPANK1	100	98.876	ENSGGOG00000005539	GPANK1	100	98.876	Gorilla_gorilla
ENSG00000204438	GPANK1	89	37.082	ENSHBUG00000018924	-	99	39.227	Haplochromis_burtoni
ENSG00000204438	GPANK1	100	80.899	ENSHGLG00000011853	GPANK1	99	80.899	Heterocephalus_glaber_female
ENSG00000204438	GPANK1	100	79.213	ENSHGLG00100018021	GPANK1	100	79.213	Heterocephalus_glaber_male
ENSG00000204438	GPANK1	98	34.699	ENSHCOG00000000542	-	99	34.783	Hippocampus_comes
ENSG00000204438	GPANK1	100	82.022	ENSSTOG00000024202	GPANK1	100	82.022	Ictidomys_tridecemlineatus
ENSG00000204438	GPANK1	100	80.618	ENSJJAG00000015387	Gpank1	100	79.775	Jaculus_jaculus
ENSG00000204438	GPANK1	96	30.894	ENSLBEG00000006109	-	97	31.165	Labrus_bergylta
ENSG00000204438	GPANK1	70	36.255	ENSLBEG00000005751	GPANK1	100	32.087	Labrus_bergylta
ENSG00000204438	GPANK1	98	34.943	ENSLBEG00000006075	-	90	34.551	Labrus_bergylta
ENSG00000204438	GPANK1	100	40.374	ENSLACG00000008055	GPANK1	100	39.840	Latimeria_chalumnae
ENSG00000204438	GPANK1	98	44.231	ENSLOCG00000008972	GPANK1	99	42.700	Lepisosteus_oculatus
ENSG00000204438	GPANK1	100	80.501	ENSLAFG00000009499	GPANK1	94	83.008	Loxodonta_africana
ENSG00000204438	GPANK1	100	94.101	ENSMFAG00000037562	GPANK1	100	94.101	Macaca_fascicularis
ENSG00000204438	GPANK1	100	94.944	ENSMNEG00000040965	GPANK1	100	94.944	Macaca_nemestrina
ENSG00000204438	GPANK1	100	95.506	ENSMLEG00000034247	GPANK1	100	95.506	Mandrillus_leucophaeus
ENSG00000204438	GPANK1	98	35.389	ENSMAMG00000008470	-	99	37.067	Mastacembelus_armatus
ENSG00000204438	GPANK1	89	38.415	ENSMZEG00005012135	GPANK1	99	39.276	Maylandia_zebra
ENSG00000204438	GPANK1	100	77.654	ENSMAUG00000014293	Gpank1	100	77.095	Mesocricetus_auratus
ENSG00000204438	GPANK1	100	87.151	ENSMICG00000037690	GPANK1	100	87.151	Microcebus_murinus
ENSG00000204438	GPANK1	100	78.711	ENSMOCG00000000141	Gpank1	100	80.392	Microtus_ochrogaster
ENSG00000204438	GPANK1	98	38.692	ENSMMOG00000003606	-	97	38.692	Mola_mola
ENSG00000204438	GPANK1	100	62.327	ENSMODG00000015291	GPANK1	99	63.536	Monodelphis_domestica
ENSG00000204438	GPANK1	70	41.897	ENSMALG00000002757	-	75	43.137	Monopterus_albus
ENSG00000204438	GPANK1	100	79.330	MGP_CAROLIEiJ_G0021506	Gpank1	100	79.330	Mus_caroli
ENSG00000204438	GPANK1	100	78.492	ENSMUSG00000092417	Gpank1	100	78.492	Mus_musculus
ENSG00000204438	GPANK1	100	78.552	MGP_PahariEiJ_G0020501	Gpank1	100	78.552	Mus_pahari
ENSG00000204438	GPANK1	100	78.771	MGP_SPRETEiJ_G0022411	Gpank1	100	78.771	Mus_spretus
ENSG00000204438	GPANK1	100	80.899	ENSMPUG00000011149	GPANK1	100	82.303	Mustela_putorius_furo
ENSG00000204438	GPANK1	100	81.707	ENSMLUG00000009408	GPANK1	94	81.513	Myotis_lucifugus
ENSG00000204438	GPANK1	100	97.191	ENSNLEG00000006201	GPANK1	100	97.191	Nomascus_leucogenys
ENSG00000204438	GPANK1	100	64.045	ENSMEUG00000004082	GPANK1	100	64.888	Notamacropus_eugenii
ENSG00000204438	GPANK1	100	80.726	ENSOPRG00000012134	GPANK1	100	80.726	Ochotona_princeps
ENSG00000204438	GPANK1	99	78.028	ENSODEG00000017947	GPANK1	99	78.028	Octodon_degus
ENSG00000204438	GPANK1	100	80.726	ENSOCUG00000021491	GPANK1	100	81.564	Oryctolagus_cuniculus
ENSG00000204438	GPANK1	99	36.111	ENSORLG00000009014	-	99	38.701	Oryzias_latipes
ENSG00000204438	GPANK1	97	37.500	ENSORLG00020012082	-	99	39.024	Oryzias_latipes_hni
ENSG00000204438	GPANK1	97	36.957	ENSORLG00015011561	-	99	38.108	Oryzias_latipes_hsok
ENSG00000204438	GPANK1	100	87.395	ENSOGAG00000010276	GPANK1	100	87.395	Otolemur_garnettii
ENSG00000204438	GPANK1	100	78.652	ENSOARG00000006913	GPANK1	97	78.933	Ovis_aries
ENSG00000204438	GPANK1	100	99.438	ENSPPAG00000035166	GPANK1	100	99.438	Pan_paniscus
ENSG00000204438	GPANK1	100	83.989	ENSPPRG00000001737	GPANK1	100	83.989	Panthera_pardus
ENSG00000204438	GPANK1	100	84.270	ENSPTIG00000014920	GPANK1	100	84.270	Panthera_tigris_altaica
ENSG00000204438	GPANK1	100	99.157	ENSPTRG00000017973	GPANK1	100	99.157	Pan_troglodytes
ENSG00000204438	GPANK1	100	95.506	ENSPANG00000007625	GPANK1	100	95.506	Papio_anubis
ENSG00000204438	GPANK1	98	43.944	ENSPKIG00000001197	GPANK1	100	43.099	Paramormyrops_kingsleyae
ENSG00000204438	GPANK1	99	45.822	ENSPSIG00000006795	GPANK1	99	44.474	Pelodiscus_sinensis
ENSG00000204438	GPANK1	91	38.393	ENSPMGG00000019843	-	92	39.349	Periophthalmus_magnuspinnatus
ENSG00000204438	GPANK1	100	80.726	ENSPEMG00000014457	Gpank1	100	80.726	Peromyscus_maniculatus_bairdii
ENSG00000204438	GPANK1	99	36.579	ENSPMAG00000010274	GPANK1	100	36.579	Petromyzon_marinus
ENSG00000204438	GPANK1	100	66.106	ENSPCIG00000018505	GPANK1	100	65.922	Phascolarctos_cinereus
ENSG00000204438	GPANK1	96	33.978	ENSPFOG00000009128	-	98	35.165	Poecilia_formosa
ENSG00000204438	GPANK1	98	35.912	ENSPLAG00000007457	-	99	35.792	Poecilia_latipinna
ENSG00000204438	GPANK1	98	33.425	ENSPMEG00000011187	-	98	35.165	Poecilia_mexicana
ENSG00000204438	GPANK1	97	37.260	ENSPREG00000000043	-	98	36.164	Poecilia_reticulata
ENSG00000204438	GPANK1	100	97.472	ENSPPYG00000016447	GPANK1	90	97.472	Pongo_abelii
ENSG00000204438	GPANK1	100	68.862	ENSPCAG00000012850	GPANK1	100	66.295	Procavia_capensis
ENSG00000204438	GPANK1	100	89.106	ENSPCOG00000017559	GPANK1	100	89.106	Propithecus_coquereli
ENSG00000204438	GPANK1	87	75.325	ENSPVAG00000012380	-	60	80.272	Pteropus_vampyrus
ENSG00000204438	GPANK1	89	36.778	ENSPNYG00000021711	GPANK1	99	39.276	Pundamilia_nyererei
ENSG00000204438	GPANK1	100	76.257	ENSRNOG00000000848	Gpank1	100	79.050	Rattus_norvegicus
ENSG00000204438	GPANK1	100	94.663	ENSRROG00000036770	GPANK1	100	94.663	Rhinopithecus_roxellana
ENSG00000204438	GPANK1	100	93.036	ENSSBOG00000031598	GPANK1	100	93.872	Saimiri_boliviensis_boliviensis
ENSG00000204438	GPANK1	98	43.923	ENSSFOG00015015696	gpank1	99	43.137	Scleropages_formosus
ENSG00000204438	GPANK1	97	39.216	ENSSMAG00000021273	-	98	38.997	Scophthalmus_maximus
ENSG00000204438	GPANK1	96	35.000	ENSSDUG00000016390	-	98	36.220	Seriola_dumerili
ENSG00000204438	GPANK1	98	34.545	ENSSLDG00000022692	-	99	34.715	Seriola_lalandi_dorsalis
ENSG00000204438	GPANK1	100	78.933	ENSSARG00000013203	GPANK1	100	78.933	Sorex_araneus
ENSG00000204438	GPANK1	99	39.698	ENSSPUG00000017213	GPANK1	99	40.201	Sphenodon_punctatus
ENSG00000204438	GPANK1	97	35.121	ENSSPAG00000023053	GPANK1	99	38.482	Stegastes_partitus
ENSG00000204438	GPANK1	100	80.899	ENSSSCG00000001413	GPANK1	100	80.618	Sus_scrofa
ENSG00000204438	GPANK1	97	36.648	ENSTRUG00000024606	-	98	35.795	Takifugu_rubripes
ENSG00000204438	GPANK1	100	82.584	ENSTTRG00000014102	GPANK1	100	82.584	Tursiops_truncatus
ENSG00000204438	GPANK1	100	82.022	ENSUAMG00000012437	GPANK1	100	83.708	Ursus_americanus
ENSG00000204438	GPANK1	100	82.303	ENSUMAG00000014147	GPANK1	100	83.989	Ursus_maritimus
ENSG00000204438	GPANK1	100	81.180	ENSVPAG00000002989	GPANK1	100	81.180	Vicugna_pacos
ENSG00000204438	GPANK1	100	83.989	ENSVVUG00000020893	GPANK1	100	83.989	Vulpes_vulpes
ENSG00000204438	GPANK1	100	38.482	ENSXETG00000002509	gpank1	100	38.482	Xenopus_tropicalis
ENSG00000204438	GPANK1	97	32.113	ENSXCOG00000005699	-	95	33.053	Xiphophorus_couchianus
ENSG00000204438	GPANK1	96	33.609	ENSXMAG00000026046	-	98	35.519	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005515	protein binding	21516116.25416956.	IPI	Function